Jeotgalibaca ciconiae sp. nov., isolated from the faeces of an Oriental stork

A novel, Gram-stain-positive, non-spore-forming, facultatively anaerobic bacterium, designated strain H21T32T, was isolated from the faeces of an Oriental stork, Ciconia boyciana. Cells formed cocci grouped in pairs, tetrads or conglomerates, and colonies on solid medium were pale yellow. Strain H21T32T belonged to the genus Jeotgalibaca , family Carnobacteriaceae , order Lactobacillales and class Bacilli . The 16S rRNA gene sequences of the strain showed 97.06–97.34, 96.17–96.31 and 95.93–96.07 % similarity to the type strains of Jeotgalibaca arthritidis , J. porci and J. dankookensis , respectively. The strain grew at 10–37 °C (optimum temperature: 30 °C), with 0–7 % (w/v) NaCl (optimum salinity: 0.5 %) and at pH 7–9 (optimum pH: 8). The main cellular fatty acids were C16 : 1 ω9c, C18 : 1 ω9c and C16 : 0. The major polar lipids were diphosphatidylglycerol and phosphatidylglycerol. Respiratory quinones were not detected. Sugar components of the peptidoglycan were rhamnose, ribose and glucose. Amino acid components of the cell wall were l-alanine, d-glucose, l-lysine, glycine and aspartic acid. The DNA G+C content of the strain was 37.1 mol%. Average nucleotide identity between strain H21T32T and J. arthritidis CECT 9157T was 77.02 %, confirming that strain H21T32T represents a novel species of the genus Jeotgalibaca , for which the name Jeotgalibaca ciconiae sp. nov. is proposed. The type strain is H21T32T (=KCTC 33991T=JCM 33222T).

Characterization and Antioxidant Activities of Yellow Strain Flammulina velutipes (Jinhua Mushroom) Polysaccharides and Their Effects on ROS Content in L929 Cell

Yellow strain Flammulina velutipes, which is known as Jinhua mushroom in Taiwan, has become popular among customers due to its distinct texture that is utterly different from white strain F. velutipes. However, there has been little study on the physicochemical properties, antioxidant activities, and biological functions of yellow strain F. velutipes polysaccharides (FVYs). The specific aims of this study are to evaluate and compare the physicochemical properties, antioxidant activities, and biological functions of FVYs and white strain F. velutipes polysaccharides (FVWs) in order to select the strain appropriate for cosmetic ingredient. The FVYs and FVWs were prepared by fractional precipitation (40%, 60%, and 80%). According to the results, FVY-80 showed the greatest antioxidant activities based on 2,2-diphenyl-1-picrylhydrazyl (DPPH) (IC50 = 2.22 mg/mL) and 2,2’ -azino-bis-3-ethylbenzthiazoline-6-sulphonic acid (ABTS) radical assay (IC50 = 2.04 mg/mL). None of the fractions exhibited cytotoxicity toward L929 cell under a concentration of 500 μ g/mL. FVY-80 significantly reduced the reactive oxygen species (ROS) content in L929 cell by 55.96%, as compared with the H2O2-induced L929 cell, according to the dichloro-dihydro-fluorescein diacetate (DCFH-DA) assay. In conclusion, we suggest that FVY-80 is the best source for a cosmetics ingredient.

Symptomatology of fungal competitors on oyster mushroom’s spawn packets and in vitro evaluation using phytoextracts and a fungicide

An experiment was conducted to find out the fungal competitors and symptom studies in damaged Oyster Mushroom spawn packets at National Mushroom Development and Extension Center, Savar, Dhaka, Bangladesh. A total of nine fungal competitors of oyster mushroom were isolated and identified namely- Trichoderma harzianum Rifai, T. viride Pers. (Green strain), T. viride Pers. (Yellow strain), T. koningii Oudem, Mucor hiemalis Wehmer, Papulaspora byssina Hotson, Neurospora sp. Shear and B.O. Dodge., Aspergillus flavus Link., and Botryodiplodia theobromae Pat. on the basis of microscopic, morphological and cultural characteristics. To produce oyster mushroom in an eco-friendly manner and to find out their antifungal potency, 23 plant species belonging to 19 families were screened out against isolated nine fungal competitors of oyster mushroom. Among 23 extracts, the maximum (44%) mycelial inhibition of T. harzianum was found due to Aegle marmelos whereas Eclipta alba showed the highest mycelial inhibition (62%) of T. viride (Green strain); in case of T. viride (Yellow strain), Cassia tora exhibited the highest mycelial inhibition (39%); Diospyros cordifolia showed the maximum mycelial inhibition (48%) of T. koningii; Curcuma longa (rhizome) gave the maximum mycelial inhibition (90%) of Neurospora sp. There were no significant effects found to control of P. byssina, B. theobromae, M. hiemalis and A. flavus due to 23 different types of botanicals tested. Trichoderma harzianum, T. viride (Green strain), T. viride (Yellow strain), T. koningii, A. flavus, Neurospora sp. and P. byssina was successfully inhibited by 30, 50 and 70 ppm of fungicide-Bavistin 50 WP but B. theobromae and M. hiemalis were not affected by Bavistin at mentioned concentration.Int. J. Agril. Res. Innov. & Tech. 6 (2): 24-30, December, 2016

Efficacy of Trichoderma spp. and fungicides against Lasiodiplodia theobromae

Experiments were carried out to find out the bio-efficacy of four Trichoderma species, viz. Trichoderma harzianum, T.koningii, T.viride (green strain), T.viride (yellow strain) against canker pathogen Lasiodiplodia theobromae. Bioassay of antagonist against test pathogens conducted by dual culture techniques at different temperatures; volatile, non volatile and naturally untreated metabolites of isolates were examined. T. koningii and T.viride (yellow strain) exhibited maximum inhibition in controlling the pathogens. Fungicides, viz. Bavistin and Dithane M-45 used where Bavistin found little effective but Dithane M-45 showed no effects on pathogen. Trichoderma viride showed better performance to control Lasiodiplodia theobromae than commercial fungicides used during present investigation. DOI: http://dx.doi.org/10.3329/bjsir.v49i2.22008 Bangladesh J. Sci. Ind. Res. 49(2), 125-130, 2014

RCY1-Mediated Resistance to Cucumber mosaic virus Is Regulated by LRR Domain-Mediated Interaction with CMV(Y) Following Degradation of RCY1

RCY1, which encodes a coiled coil nucleotide-binding site leucine-rich repeat (LRR) class R protein, confers the hypersensitive response (HR) to a yellow strain of Cucumber mosaic virus (CMV[Y]) in Arabidopsis thaliana. Nicotiana benthamiana transformed with hemagglutinin (HA) epitope-tagged RCY1 (RCY1-HA) also exhibited a defense response accompanied by HR cell death and induction of defense-related gene expression in response to CMV(Y). Following transient expression of RCY1-HA by agroinfiltration, the defense reaction was induced in N. benthamiana leaves infected with CMV(Y) but not in virulent CMV(B2)-infected N. benthamiana leaves transiently expressing RCY1-HA or CMV(Y)-infected N. benthamiana leaves transiently expressing HA-tagged RPP8 (RPP8-HA), which is allelic to RCY1. This result suggests that Arabidopsis RCY1-conferred resistance to CMV(Y) could be reproduced in N. benthamiana leaves in a gene-for-gene manner. Expression of a series of chimeric constructs between RCY1-HA and RPP8-HA in CMV(Y)-infected N. benthamiana indicated that induction of defense responses to CMV(Y) is regulated by the LRR domain of RCY1. Interestingly, in CMV(Y)-infected N. benthamiana manifesting the defense response, the levels of both RCY1 and chimeric proteins harboring the RCY1 LRR domain were significantly reduced. Taken together, these data indicate that the RCY1-conferred resistance response to CMV(Y) is regulated by an LRR domain-mediated interaction with CMV(Y) and seems to be tightly associated with the degradation of RCY1 in response to CMV(Y).