Collection of VKM Paleofungi

A unique collection of paleofungi from permafrost sediments, cryopegs, paleoseeds, and frozen volcanic ash from the Arctic and Antarctic, collected at different depths, was created in All-Russian Collection of Microorganisms (VKM). Some samples are as old as 3 million years. The collection includes psychrotolerant fungi, which have wide adaptive potential and are able to thrive in low-temperature habitats, and fungi that remain viable due to the presence of natural cryoprotectors that ensure the survival of fungal cells during low-temperature preservation in permafrost sediments. The collection contains 780 strains from 79 genera and more than 160 species and is maintained in accordance with international standards of microbial viability preservation and information support.

Insights into the climate-driven evolution of gas hydrate-bearing permafrost sediments: implications for prediction of environmental impacts and security of energy in cold regions

The present study investigates the evolution of gas hydrate-bearing permafrost sediments against the environmental temperature change.

Development of a Coupled Geophysical-Geothermal Scheme for Quantification of Hydrates in Gas Hydrate-Bearing Permafrost Sediments

Quantification of hydrates in permafrost sediments using conventional seismic techniques has been always a major challenge in study of the climate-driven evolution of gas hydrate-bearing permafrost sediments, due to almost...

Insights into community of photosynthetic microorganisms from permafrost

ABSTRACT This work integrates cultivation studies of Siberian permafrost and analyses of metagenomes from different locations in the Arctic with the aim of obtaining insights into the community of photosynthetic microorganisms in perennially frozen deposits. Cyanobacteria and microalgae have been described in Arctic aquatic and surface soil environments, but their diversity and ability to withstand harsh conditions within the permafrost are still largely unknown. Community structure of photosynthetic organisms in permafrost sediments was explored using Arctic metagenomes available through the MG-RAST. Sequences affiliated with cyanobacteria represented from 0.25 to 3.03% of total sequences, followed by sequences affiliated with Streptophyta (algae and vascular plants) 0.01–0.45% and Chlorophyta (green algae) 0.01–0.1%. Enrichment and cultivation approaches revealed that cyanobacteria and green algae survive in permafrost and they could be revived during prolonged incubation at low light intensity. Among photosynthetic microorganisms isolated from permafrost, the filamentous Oscillatoria-like cyanobacteria and unicellular green algae of the genus Chlorella were dominant. Our findings suggest that permafrost cyanobacteria and green algae are expected to be effective members of the re-assembled community after permafrost thawing and soil collapse.

Draft Genome Sequence of Microbacterium sp. Gd 4-13, Isolated from Gydanskiy Peninsula Permafrost Sediments of Marine Origin

Here, we report the draft genome sequence of Microbacterium sp. strain Gd 4-13, isolated from late Pleistocene permafrost of marine origin located on the Gydanskiy Peninsula. Genome sequence analysis was performed to understand strain survivability mechanisms under permafrost conditions and to expand biotechnology applications.

Anaerobic methanotrophic communities thrive in deep submarine permafrost

Thawing submarine permafrost is a source of methane to the subsurface biosphere. Methane oxidation in submarine permafrost sediments has been proposed, but the responsible microorganisms remain uncharacterized. We analyzed archaeal communities and identified distinct anaerobic methanotrophic (ANME-2a/b, ANME-2d) assemblages in frozen and completely thawed submarine permafrost sediments. Besides archaea potentially involved in AOM we found a large diversity of archaea mainly belonging to Bathyarchaeota, Thaumarchaeota, and Euryarchaeota. Methane concentrations and δ13C-methane signatures distinguish horizons of potential anaerobic oxidation of methane (AOM) coupled either to sulfate reduction in a sulfate-methane transition zone (SMTZ) or to the reduction of other electron acceptors, such as iron, manganese or nitrate. Analysis of functional marker genes (mcrA) and fluorescence in situ hybridization (FISH) corroborate AOM communities in submarine permafrost sediments potentially active at low temperatures. Extrapolating potential AOM rates, when scaled to the total area of expected submarine permafrost thaw, reveals that methane could be consumed at rates between 8 and 120 Tg C per year, which is comparable to other AOM habitats such as seeps, continental SMTZ and wetlands. We thus propose that AOM is active where submarine permafrost thaws and needs to be accounted for in global methane budgets.