tryptophan tryptophylquinone
Recently Published Documents


TOTAL DOCUMENTS

49
(FIVE YEARS 0)

H-INDEX

20
(FIVE YEARS 0)

2014 ◽  
Vol 70 (a1) ◽  
pp. C312-C312
Author(s):  
Carrie Wilmot ◽  
Erik Yukl ◽  
Lyndal Jensen ◽  
Victor Davidson

Methylamine dehydrogenase (MADH) enables some methylotrophic/autotrophic bacteria to grow on methylamine as a sole source of carbon and energy. MADH catalysis depends on the cofactor tryptophan tryptophylquinone (TTQ) that is a posttranslational modification of two Trp residues in the MADH β-subunit. The maturation of MADH depends on four gene products located in the methylamine utilization (mau) gene cluster. One of these, mauG, encodes a c-type di-heme enzyme that completes synthesis of the TTQ cofactor. The potent oxidant is an unusual bis-Fe(IV) MauG species composed of a ferryl heme (Fe(IV)=O) with an oxidizing equivalent stored as Fe(IV) at the second heme, which has an unusual His, Tyr axial ligation. The bis-Fe(IV) oxidant is formally Fe(V) and equivalent to Compound I. Completion of TTQ to generate active MADH involves long-range electron transfer and a radical hopping mechanism to effect catalysis over a 40 Å distance. The MauG catalyzed reaction occurs in three discrete 2-electron events in a hydrogen peroxide or molecular oxygen (+ reducing equivalents) dependent process. A crystal structure of MauG in complex with its protein substrate, a precursor form of MADH known as preMADH, has been solved. The crystals are catalytically active. The order of the 2-electron chemistry catalyzed by MauG was determined through a series of structures from crystals harvested after different amounts of time following crystallization. Hydrogen peroxide to initiate the reaction was generated by the slow breakdown of polyethylene glycol used in crystallization. These in crystallo data are corroborated by mass spectrometry in solution experiments.


2013 ◽  
Vol 456 (1) ◽  
pp. 129-137 ◽  
Author(s):  
Sooim Shin ◽  
Manliang Feng ◽  
Victor L. Davidson

Mutagenesis of Trp93 of the dihaem enzyme MauG revealed a role for this residue in binding Ca2+ and created an enzyme that exhibits an extraordinarily long pre-steady-state reaction phase during which reaction intermediates of a processive enzyme reaction accumulate.


2013 ◽  
Vol 91 (7) ◽  
pp. 628-636 ◽  
Author(s):  
Christophe Narth ◽  
Natacha Gillet ◽  
Bernard Lévy ◽  
Isabelle Demachy ◽  
Aurélien de la Lande

The notion of decoherence is particularly adapted to discuss the quantum-to-classical transition in the context of chemical reactions. Decoherence can be modeled by computing the time evolution of nuclear wave packets evolving on distinct potential energy surfaces, here using density functional theory (DFT) and Born–Oppenheimer molecular dynamics simulations. We investigate a redox cofactor of biological interest (tryptophan tryptophylquinone, TTQ) found in the enzyme methylamine dehydrogenase. We also report the first systematic comparison of semi-empirical DFT (tight-binding DFT) and classical force field approaches for estimating decoherence in molecular systems. In the TTQ cofactor, we find that decoherence combines structural and dynamical aspects: it is initiated by the divergent motions of few atoms and then propagates dynamically to the remaining atoms. It is the mass effect of all the atoms that leads to decoherence within a few femtosecond.


FEBS Letters ◽  
2013 ◽  
Vol 587 (12) ◽  
pp. 1736-1741 ◽  
Author(s):  
Nafez Abu Tarboush ◽  
Lyndal M.R. Jensen ◽  
Carrie M. Wilmot ◽  
Victor L. Davidson

2013 ◽  
Vol 110 (12) ◽  
pp. 4569-4573 ◽  
Author(s):  
E. T. Yukl ◽  
F. Liu ◽  
J. Krzystek ◽  
S. Shin ◽  
L. M. R. Jensen ◽  
...  

Sign in / Sign up

Export Citation Format

Share Document