scholarly journals Development of Visible/Near-Infrared Hyperspectral Imaging for the Prediction of Total Arsenic Concentration in Soil

2020 ◽  
Vol 10 (8) ◽  
pp. 2941 ◽  
Author(s):  
Lifei Wei ◽  
Yangxi Zhang ◽  
Ziran Yuan ◽  
Zhengxiang Wang ◽  
Feng Yin ◽  
...  
Keyword(s):  
Hyperspectral Imaging ◽  
Near Infrared ◽  
Imaging System ◽  
Arsenic Concentration ◽  
Rank Correlation ◽  
Soil Samples ◽  
Support Vector ◽  
Atomic Fluorescence Spectrometry ◽  
Total Arsenic ◽  
Spearman’S Rank Correlation

Soil total arsenic (TAs) contamination caused by human activities—such as mining, smelting, and agriculture—is a problem of global concern. Visible/near-infrared (VNIR), X-ray fluorescence spectroscopy (XRF), and laser-induced breakdown spectroscopy (LIBS) do not need too much sample preparation and utilization of chemicals to evaluate total arsenic (TAs) concentration in soil. VNIR with hyperspectral imaging has the potential to predict TAs concentration in soil. In this study, 59 soil samples were collected from the Daye City mining area of China, and hyperspectral imaging of the soil samples was undertaken using a visible/near-infrared hyperspectral imaging system (wavelength range 470–900 nm). Spectral preprocessing included standard normal variate (SNV) transformation, multivariate scatter correction (MSC), first derivative (FD) preprocessing, and second derivative (SD) preprocessing. Characteristic bands were then identified based on Spearman’s rank correlation coefficients. Four regression models were used for the modeling prediction: partial least squares regression (PLSR) (R2 = 0.71, RMSE = 0.48), support vector machine regression (SVMR) (R2 = 0.78, RMSE = 0.42), random forest (RF) (R2 = 0.78, RMSE = 0.42), and extremely randomized trees regression (ETR) (R2 = 0.81, RMSE = 0.38). The prediction results were compared with the results of atomic fluorescence spectrometry methods. In the prediction results of the models, the accuracy of ETR using FD preprocessing was the highest. The results confirmed that hyperspectral imaging combined with Spearman’s rank correlation with machine learning models can be used to estimate soil TAs content.

scholarly journals Hyperspectral Imaging Coupled with Random Frog and Calibration Models for Assessment of Total Soluble Solids in Mulberries

2015 ◽  
Vol 2015 ◽  
pp. 1-11 ◽  
Author(s):  
Yan-Ru Zhao ◽  
Ke-Qiang Yu ◽  
Yong He
Keyword(s):  
Spatial Distribution ◽  
Hyperspectral Imaging ◽  
Near Infrared ◽  
Imaging System ◽  
Least Square ◽  
Soluble Solids ◽  
Internal Quality ◽  
Support Vector ◽  
Total Soluble Solids ◽  
Mulberry Fruits

Chemometrics methods coupled with hyperspectral imaging technology in visible and near infrared (Vis/NIR) region (380–1030 nm) were introduced to assess total soluble solids (TSS) in mulberries. Hyperspectral images of 310 mulberries were acquired by hyperspectral reflectance imaging system (512 bands) and their corresponding TSS contents were measured by a Brix meter. Random frog (RF) method was used to select important wavelengths from the full wavelengths. TSS values in mulberry fruits were predicted by partial least squares regression (PLSR) and least-square support vector machine (LS-SVM) models based on full wavelengths and the selected important wavelengths. The optimal PLSR model with 23 important wavelengths was employed to visualise the spatial distribution of TSS in tested samples, and TSS concentrations in mulberries were revealed through the TSS spatial distribution. The results declared that hyperspectral imaging is promising for determining the spatial distribution of TSS content in mulberry fruits, which provides a reference for detecting the internal quality of fruits.

scholarly journals Detection of Sulfite Dioxide Residue on the Surface of Fresh-Cut Potato Slices Using Near-Infrared Hyperspectral Imaging System and Portable Near-Infrared Spectrometer

Molecules ◽  
2020 ◽  
Vol 25 (7) ◽  
pp. 1651 ◽  
Author(s):  
Xiulin Bai ◽  
Qinlin Xiao ◽  
Lei Zhou ◽  
Yu Tang ◽  
Yong He
Keyword(s):  
Sulfur Dioxide ◽  
Hyperspectral Imaging ◽  
Classification Accuracy ◽  
Near Infrared ◽  
Imaging System ◽  
Principal Component ◽  
Support Vector ◽  
Svm Model ◽  
Fresh Cut ◽  
Potato Slices

Sodium pyrosulfite is a browning inhibitor used for the storage of fresh-cut potato slices. Excessive use of sodium pyrosulfite can lead to sulfur dioxide residue, which is harmful for the human body. The sulfur dioxide residue on the surface of fresh-cut potato slices immersed in different concentrations of sodium pyrosulfite solution was classified by near-infrared hyperspectral imaging (NIR-HSI) system and portable near-infrared (NIR) spectrometer. Principal component analysis was used to analyze the object-wise spectra, and support vector machine (SVM) model was established. The classification accuracy of calibration set and prediction set were 98.75% and 95%, respectively. Savitzky–Golay algorithm was used to recognize the important wavelengths, and SVM model was established based on the recognized important wavelengths. The final classification accuracy was slightly less than that based on the full spectra. In addition, the pixel-wise spectra extracted from NIR-HSI system could realize the visualization of different samples, and intuitively reflect the differences among the samples. The results showed that it was feasible to classify the sulfur dioxide residue on the surface of fresh-cut potato slices immersed in different concentration of sodium pyrosulfite solution by NIR spectra. It provided an alternative method for the detection of sulfur dioxide residue on the surface of fresh-cut potato slices.

scholarly journals Non-Destructive Detection Pilot Study of Vegetable Organic Residues Using VNIR Hyperspectral Imaging and Deep Learning Techniques

Sensors ◽  
2021 ◽  
Vol 21 (9) ◽  
pp. 2899
Author(s):  
Youngwook Seo ◽  
Giyoung Kim ◽  
Jongguk Lim ◽  
Ahyeong Lee ◽  
Balgeum Kim ◽  
...  
Keyword(s):  
Deep Learning ◽  
Hyperspectral Imaging ◽  
Near Infrared ◽  
Imaging System ◽  
Imaging Technique ◽  
Support Vector ◽  
Organic Residues ◽  
Efficient Detection ◽  
Non Destructive

Contamination is a critical issue that affects food consumption adversely. Therefore, efficient detection and classification of food contaminants are essential to ensure food safety. This study applied a visible and near-infrared (VNIR) hyperspectral imaging technique to detect and classify organic residues on the metallic surfaces of food processing machinery. The experimental analysis was performed by diluting both potato and spinach juices to six different concentration levels using distilled water. The 3D hypercube data were acquired in the range of 400–1000 nm using a line-scan VNIR hyperspectral imaging system. Each diluted residue in the spectral domain was detected and classified using six classification methods, including a 1D convolutional neural network (CNN-1D) and five pre-processing methods. Among them, CNN-1D exhibited the highest classification accuracy, with a 0.99 and 0.98 calibration result and a 0.94 validation result for both spinach and potato residues. Therefore, in comparison with the validation accuracy of the support vector machine classifier (0.9 and 0.92 for spinach and potato, respectively), the CNN-1D technique demonstrated improved performance. Hence, the VNIR hyperspectral imaging technique with deep learning can potentially afford rapid and non-destructive detection and classification of organic residues in food facilities.

scholarly journals Identification of peat type and humification by laboratory VNIR/SWIR hyperspectral imaging of peat profiles with focus on fen-bog transition in aapa mires

2020 ◽  
Author(s):  
L. Granlund ◽  
M. Keinänen ◽  
T. Tahvanainen
Keyword(s):  
Hyperspectral Imaging ◽  
Near Infrared ◽  
Support Vector ◽  
High Resolution Imaging ◽  
Factors Affecting ◽  
Vector Machines ◽  
Resolution Imaging ◽  
Shortwave Infrared ◽  
Type Classification ◽  
Wide Potential

Abstract Aims Hyperspectral imaging (HSI) has high potential for analysing peat cores, but methodologies are deficient. We aimed for robust peat type classification and humification estimation. We also explored other factors affecting peat spectral properties. Methods We used two laboratory setups: VNIR (visible to near-infrared) and SWIR (shortwave infrared) for high resolution imaging of intact peat profiles with fen-bog transitions. Peat types were classified with support vector machines, indices were developed for von Post estimation, and K-means clustering was used to analyse stratigraphic patterns in peat quality. With separate experiments, we studied spectral effects of drying and oxidation. Results Despite major effects, oxidation and water content did not impede robust HSI classification. The accuracy between Carex peat and Sphagnum peat in validation was 80% with VNIR and 81% with SWIR data. The spectral humification indices had accuracies of 82% with VNIR and 56%. Stratigraphic HSI patterns revealed that 36% of peat layer shifts were inclined by over 20 degrees. Spectral indices were used to extrapolate visualisations of element concentrations. Conclusions HSI provided reliable information of basic peat quality and was useful in visual mapping, that can guide sampling for other analyses. HSI can manage large amounts of samples to widen the scope of detailed analysis beyond single profiles and it has wide potential in peat research beyond the exploratory scope of this paper. We were able to confirm the capacity of HSI to reveal shifts of peat quality, connected to ecosystem-scale change.

scholarly journals Prediction of Douglas-Fir Lumber Properties: Comparison between a Benchtop Near-Infrared Spectrometer and Hyperspectral Imaging System

2018 ◽  
Vol 8 (12) ◽  
pp. 2602 ◽  
Author(s):  
Laurence Schimleck ◽  
Joseph Dahlen ◽  
Seung-Chul Yoon ◽  
Kurt Lawrence ◽  
Paul Jones
Keyword(s):  
Hyperspectral Imaging ◽  
Near Infrared ◽  
Imaging System ◽  
Nir Spectroscopy ◽  
Physical And Mechanical Properties ◽  
Douglas Fir ◽  
Modulus Of Rupture ◽  
Visual Grade ◽  
Fit Statistics ◽  
Infrared Spectrometer

Near-infrared (NIR) spectroscopy and NIR hyperspectral imaging (NIR-HSI) were compared for the rapid estimation of physical and mechanical properties of No. 2 visual grade 2 × 4 (38.1 mm by 88.9 mm) Douglas-fir structural lumber. In total, 390 lumber samples were acquired from four mills in North America and destructively tested through bending. From each piece of lumber, a 25-mm length block was cut to collect diffuse reflectance NIR spectra and hyperspectral images. Calibrations for the specific gravity (SG) of both the lumber (SGlumber) and 25-mm block (SGblock) and the lumber modulus of elasticity (MOE) and modulus of rupture (MOR) were created using partial least squares (PLS) regression and their performance checked with a prediction set. The strongest calibrations were based on NIR spectra; however, the NIR-HSI data provided stronger predictions for all properties. In terms of fit statistics, SGblock gave the best results, followed by SGlumber, MOE, and MOR. The NIR-HSI SGlumber, MOE, and MOR calibrations were used to predict these properties for each pixel across the transverse surface of the scanned samples, allowing SG, MOE, and MOR variation within and among rings to be observed.

scholarly journals A Quantitative Assessment of Pre-Operative MRI Reports in Glioma Patients: Report Metrics and IDH Prediction Ability

2021 ◽  
Vol 10 ◽  
Author(s):  
Hang Cao ◽  
E. Zeynep Erson-Omay ◽  
Murat Günel ◽  
Jennifer Moliterno ◽  
Robert K. Fulbright
Keyword(s):  
High Performance ◽  
Prediction Models ◽  
Rank Correlation ◽  
Support Vector ◽  
Wild Type ◽  
K Nearest Neighbors ◽  
Prediction Ability ◽  
Spearman’S Rank Correlation ◽  
Negative Findings ◽  
T1 Contrast

ObjectivesTo measure the metrics of glioma pre-operative MRI reports and build IDH prediction models.MethodsPre-operative MRI reports of 144 glioma patients in a single institution were collected retrospectively. Words were transformed to lowercase letters. White spaces, punctuations, and stop words were removed. Stemming was performed. A word cloud method applied to processed text matrix visualized language behavior. Spearman’s rank correlation assessed the correlation between the subjective descriptions of the enhancement pattern. The T1-contrast images associated with enhancement descriptions were selected. The keywords associated with IDH status were evaluated by χ2 value ranking. Random forest, k-nearest neighbors and Support Vector Machine algorithms were used to train models based on report features and age. All statistical analysis used two-tailed test with significance at p <.05.ResultsLonger word counts occurred in reports of older patients, higher grade gliomas, and wild type IDH gliomas. We identified 30 glioma enhancement descriptions, eight of which were commonly used: peripheral, heterogeneous, irregular, nodular, thick, rim, large, and ring. Five of eight patterns were correlated. IDH mutant tumors were characterized by words related to normal, symmetric or negative findings. IDH wild type tumors were characterized words by related to pathological MR findings like enhancement, necrosis and FLAIR foci. An integrated KNN model based on report features and age demonstrated high-performance (AUC: 0.89, 95% CI: 0.88–0.90).ConclusionReport length depended on age, glioma grade, and IDH status. Description of glioma enhancement was varied. Report descriptions differed for IDH wild and mutant gliomas. Report features can be used to predict glioma IDH status.

scholarly journals Chemometric Tools for NIRS and NIR Hyperspectral Imaging

2012 ◽  
Vol 69 (1) ◽  
Author(s):  
Laura M. DALE ◽  
André THEWIS ◽  
Ioan ROTAR ◽  
Juan A. FERNANDEZ PIERNA ◽  
Christelle BOUDRY ◽  
...  
Keyword(s):  
Hyperspectral Imaging ◽  
Near Infrared ◽  
Agricultural Sector ◽  
Spatial Information ◽  
Imaging System ◽  
Agricultural Products ◽  
Chemical Information ◽  
Special Focus ◽  
Large Area ◽  
Analytical Tools

Nowadays in agriculture, new analytical tools based on spectroscopic technologies are developed. Near Infrared Spectroscopy (NIRS) is a well known technology in the agricultural sector allowing the acquisition of chemical information from the samples with a large number of advantages, such as: easy to use tool, fast and simultaneous analysis of several components, non-polluting, noninvasive and non destructive technology, and possibility of online or field implementation. Recently, NIRS system was combined with imaging technologies creating the Near Infrared Hyperspectral Imaging system (NIR-HSI). This technology provides simultaneously spectral and spatial information from an object. The main differences between NIR-HSI and NIRS is that many spectra can be recorded simultaneously from a large area of an object with the former while with NIRS only one spectrum was recorded for analysis on a small area. In this work, both technologies are presented with special focus on the main spectrum and images analysis methods. Several qualitative and quantitative applications of NIRS and NIR-HSI in agricultural products are listed. Developments of NIRS and NIR-HSI will enhance progress in the field of agriculture by providing high quality and safe agricultural products, better plant and grain selection techniques or compound feed industry’s productivity among others.

scholarly journals NIR Hyperspectral Imaging Technology Combined with Multivariate Methods to Study the Residues of Different Concentrations of Omethoate on Wheat Grain Surface

Sensors ◽  
2019 ◽  
Vol 19 (14) ◽  
pp. 3147 ◽  
Author(s):  
Liu Zhang ◽  
Zhenhong Rao ◽  
Haiyan Ji
Keyword(s):  
Feature Extraction ◽  
Hyperspectral Imaging ◽  
Hyperspectral Image ◽  
Imaging System ◽  
Support Vector ◽  
Multivariate Methods ◽  
Model Combination ◽  
Modeling Analysis ◽  
Svm Model ◽  
Wheat Kernels

In this study, a hyperspectral imaging system of 866.4–1701.0 nm was selected and combined with multivariate methods to identify wheat kernels with different concentrations of omethoate on the surface. In order to obtain the optimal model combination, three preprocessing methods (standard normal variate (SNV), Savitzky–Golay first derivative (SG1), and multivariate scatter correction (MSC)), three feature extraction algorithms (successive projections algorithm (SPA), random frog (RF), and neighborhood component analysis (NCA)), and three classifier models (decision tree (DT), k-nearest neighbor (KNN), and support vector machine (SVM)) were applied to make a comparison. Firstly, based on the full wavelengths modeling analysis, it was found that the spectral data after MSC processing performed best in the three classifier models. Secondly, three feature extraction algorithms were used to extract the feature wavelength of MSC processed data and based on feature wavelengths modeling analysis. As a result, the MSC–NCA–SVM model performed best and was selected as the best model. Finally, in order to verify the reliability of the selected model, the hyperspectral image was substituted into the MSC–NCA–SVM model and the object-wise method was used to visualize the image classification. The overall classification accuracy of the four types of wheat kernels reached 98.75%, which indicates that the selected model is reliable.

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