Electron correlation effects in boron clusters BnQ (for Q=-1,0, 1 and n ≤13) based on quantum Monte Carlo simulations

We present all-electron quantum Monte Carlo simulations on the anionic, neutral, and cationic boron clusters BnQ with up to 13 atoms (Q=-1,0,+1 and n≤ 13). Accurate total energies of these...

Influence of electronic states of nanographs in carbon microcrystallines on surface chemistry of activated charcoal varieties

In this paper, the nature of the chemical activity of pyrolyzed nanostructured carbon materials (PNCM), in particular active carbon (AC), in reactions of electron transfer considered from a single position, reflecting the priority role of paramagnetic centers and edge defunctionaled carbon atoms of carbon microcristallites (CMC) due to pyrolysis of precursors. Clusters in the form of polycyclic aromatic hydrocarbons with open (OES) and closed (CES) electronic shells containing terminal hydrogen atoms (or their vacancies) and different terminal functional groups depending on specific model reactions of radical recombination, combination, replacement and elimination were used to model of nanographenes (NG) and CM. Quantum-chemical calculations of molecular models of NG and CMC and heat effects of model reactions were performed in frames of the density functional theory (DFT) using extended valence-splitted basis 6-31G(d) with full geometry optimization of concrete molecules, ions, radicals and NG models. The energies of boundary orbitals were calculated by means of the restricted Hartry-Fock method for objects with closed (RHF) and open (ROHF) electronic shells. The total energies of small negative ions (HOO-, HO-) and anion-radical О2•‾) were given as the sum of calculated total energies of these compounds and their experimental electron affinities. The estimation of probability of considered chemical transformations was carried out on the base on the well-known Bell-Evans-Polyani principle about the inverse correlation of the thermal effects of reactions and its activation energies. It is shown that the energy gap ΔЕ (energy difference of boundary orbitals levels) in simulated nanographens should depend on a number of factors: the periphery structure of models, its size and shape, the number and nature of various structural defects, electronic states of NG. When considering possible chemical transformations on the AC surface, rectangular models of NG were used, for which the simple classification by type and number of edge structural elements of the carbon lattice was proposed. Quantum chemical calculations of molecular models of NG and CNC and the energy of model reactions in frames of DTF showed that the chemisorption of free radicals (3O2 and N•O), as recombination at free radical centers (FRC), should occur with significant heat effects. Such calculations give reason to believe that FRC play an important role in formation of the functional cover on the periphery of NG in CMC of studied materials. On the base of of cluster models of active carbon with OES new ideas about possible reactions mechanisms of radical-anion О2•‾ formation and decomposition of hydrogen peroxide on the surface of active carbon are offered. Explanation of increased activity of AC reduced by hydrogen in H2O2 decomposition is given. It is shown that these PNCM models, as first of all AC, allow to adequately describe their semiconductor nature and acid-base properties of such materials.

Reactivity of O-Drug Bond in some Suggested Voltarine Carriers: Semiempirical and ab Initio Methods

In this work, the possibility to use new suggested carriers (D= Aspirin, Ibuprofen, Paracetamol, Tramal) is discussed for diclofenac drug (voltarine) by using quantum mechanics calculations. The calculation methods (PM3) and (DFT) have been used for determination the reaction path of (O-D) bond rupture energies. Different groups of drugs as a carrier for diclofenac prodrugs (in a vacuum) have been used; at their optimized geometries. The calculations included the geometrical structure and some of the physical properties, in addition to the toxicity, biological activity, and NLO properties of the prodrugs, investigated using HF method. The calculations were done by Gaussian 09 program. The comparison was made for total energies of reactants, activation energies, and transition states to final products. The suggested prodrugs aim to improve the diclofenac carrier's properties and obtain new alternatives for the approved carriers theoretically.

Gaia EDR3 Proper Motions of Milky Way Dwarfs. II Velocities, Total Energy, and Angular Momentum

Here we show that precise Gaia EDR3 proper motions have provided robust estimates of 3D velocities, angular momentum, and total energy for 40 Milky Way dwarfs. The results are statistically robust and are independent of the Milky Way mass profile. Dwarfs do not behave like long-lived satellites of the Milky Way because of their excessively large velocities, angular momenta, and total energies. Comparing them to other MW halo populations, we find that many are at first passage, ≤2 Gyr ago, i.e., more recent than the passage of Sagittarius, ∼4–5 Gyr ago. We suggest that this is in agreement with the stellar populations of all dwarfs, for which we find that a small fraction of young stars cannot be excluded. We also find that dwarf radial velocities contribute too little to their kinetic energy when compared to satellite systems with motions only regulated by gravity, and some other mechanism must be at work such as ram pressure. The latter may have preferentially reduced radial velocities when dwarf progenitors entered the halo until they lost their gas. It could also explain why most dwarfs lie near their pericenter. We also discover a novel large-scale structure perpendicular to the Milky Way disk, which is made by 20% of dwarfs orbiting or counter-orbiting with the Sagittarius dwarf.

Towards an improved understanding of $$\varvec{\eta \rightarrow \gamma ^*\gamma ^*}$$

We argue that high-quality data on the reaction $$e^+e^-\rightarrow \pi ^+\pi ^-\eta $$ e + e - → π + π - η will allow one to determine the doubly-virtual form factor $$\eta \rightarrow \gamma ^*\gamma ^*$$ η → γ ∗ γ ∗ in a model-independent way with controlled accuracy. This is an important step towards a reliable evaluation of the hadronic light-by-light scattering contribution to the anomalous magnetic moment of the muon. When analyzing the existing data for $$e^+e^-\rightarrow \pi ^+\pi ^-\eta $$ e + e - → π + π - η for total energies squared $$k^2>1\,\text {GeV}^2$$ k 2 > 1 GeV 2 , we demonstrate that the effect of the $$a_2$$ a 2 meson provides a natural breaking mechanism for the commonly employed factorization ansatz in the doubly-virtual form factor $$F_{\eta \gamma ^*\gamma ^*}(q^2,k^2)$$ F η γ ∗ γ ∗ ( q 2 , k 2 ) . However, better data are needed to draw firm conclusions.

Copper(II) Prevents the Saccarine-Dialkylcyanamide Coupling by Forming Mononuclear (Saccharinate)(Dialkylcyanamide)copper(II) Complexes

The reaction in the system CuII/sacNa(H)/NCNR2 (sacNa(H) = sodium saccharinate (saccharin); R = Me, Et) results in the formation of the complexes [Cu(sac)2(NCNR2)(H2O)2] (R = Me 1, Et 2) instead of the expected products derived from the saccharin–cyanamide coupling. Complexes 1, 2, and hydrate 1·2H2O were characterized by IR, AAS (Cu%), TGA, and also by single-crystal X-ray diffraction for 1 and 1·2H2O. An integrated computational study of model structure 1 in the gas phase demonstrates that the Cu–Ncyanamide and Cu–Nsac coordination bonds exhibited a single bond character, polarized toward the N atom and almost purely electrostatic, with the calculated vertical total energies for the Cu–Ncyanamide and Cu–Nsac of 43.6 and 156.4 kcal/mol, respectively. These data confirmed that the copper(II) completely blocks the nucleophilic centers of ligands via coordination, thus preventing the saccharin–cyanamide coupling.

Molecular Dynamic and Docking Simulation to Prevent Thymine Dimer as the Main Reason for Skin Cancer

Two major types can be repaired UV-induced DNA lesions. The first one is a light-dependent process that reverts UV damage applying particular wavelengths. The second is a light-independent process that excises the light-damaged region under novo synthesis of an intact DNA. The iGEMDOCK has been used for this study, and the acceptable thymine dimer can be defined for the binding site in whole DNA structures. The DNA is worked with two thymine in a segment of nucleic acids, and iGEMDOCK can help to prepare a suitable binding between them. The total energies of the model systems are a total of several partial energies as follows: E(system) = E(bond) + E(angle) + E(torsion) +E(over) +E(vdW) + E(Coulomb) + E(Specific). EvdW +E(Coulomb) represents the dispersive and electrostatic energies contribution between all atoms, respectively. Finally, E(Specific) is system-specific energy such as lone-pair, conjugation, and hydrogen binding. The DFT and HF calculations of the thymine dimer exhibited that the ring fusion at the C5 and C6 atoms of two thymine bases produced a four-member cyclo-butane puckered ring, as well as the feature, is seen with the MPn or Moller-Pleset level. In addition, the UV radiations between 360 nm to 200 nm have been investigated for the study of thymine dimers.

Investigating the Effect of Nitro Groups on the Electronic Properties of Phenanthrene Compound

Theoretical study for calculating the electronic structure of phenanthrene compound and its simplest derivatives with nitro groups in different positions was performed using density functional theory (DFT) based on the hybrid function of three parameters. Lee-Yang-Parr [B3LYP] with 6-31 [d, p] basis set was used to investigate the effect of nitro groups on the electronic properties of phenanthrene compound. All calculations were obtaind by employing the used method using the Gaussian 09 package of programs. The energy gaps, total energies, the energy of HOMO and LUMO, softness, dipole moment, Fermi level, molecular symmetry, electrochemical hardness, electron density, electrostatic potential surfaces and infrared spectra were calculated. The results showed that the electronic properties of phenanthrene molecule are affected by the added nitro group. The total energy, energy gap and the HOMO and LUMO energy decreased compared with the original molecule. The ionization potential (IP), electron affinity (EA) and Fermi level (Ef) are increased compared with the original molecule. Keywords: B3LYP/DFT calculations, Phenanthrene molecule, Nitro group, Energy gap, Ionization potential.