Open Water Flume for Fluid Mechanics Lab

Open water flume tanks with closed-loop circulation driven by centrifugal pumps are essential for hydro experimentation in academic settings as well as research centers. The device is also attractive due to its versatility and easy-to-maintain characteristics. Nevertheless, commercial open flume systems can be expensive and become less prioritized in engineering schools. This paper describes the design and fabrication of an affordable, medium-size water flume tank, suitable for education purposes. The central piece of the system is a transparent observation chamber where fluid experiments are typically conducted and observed. The expected maximum average water speed in the observation chamber of about 60 cm per second was achieved by the inclusion of a 3 hp centrifugal pump. The size and capacity of the current design were constrained by space limitation and available funds. The educational facility was assigned as a two-semester multi-disciplinary capstone senior design project incorporating students and faculty of mechanical, electrical, and computer engineering programs in our campus. The design process provides a training platform for skills in the area of Computer Aided Designs (CAD), Finite Element Analysis (FEA), Computational Fluid Dynamics (CFD), manufacturing, and experimentation. The multi-disciplinary project has contributed to the improvement of soft skills, such as time management, team working, and professional presentation, of the team members. The total material cost of the facility was less than USD 6000, which includes the pump and its variable frequency driver. The project was made possible due to the generous sponsor of the Vibration Institute.

On-Chip Inverted Emulsion Method for Fast Giant Vesicle Production, Handling, and Analysis

Liposomes and giant unilamellar vesicles (GUVs) in particular are excellent compartments for constructing artificial cells. Traditionally, their use requires bench-top vesicle growth, followed by experimentation under a microscope. Such steps are time-consuming and can lead to loss of vesicles when they are transferred to an observation chamber. To overcome these issues, we present an integrated microfluidic chip which combines GUV formation, trapping, and multiple separate experiments in the same device. First, we optimized the buffer conditions to maximize both the yield and the subsequent trapping of the vesicles in micro-posts. Captured GUVs were monodisperse with specific size of 18 ± 4 µm in diameter. Next, we introduce a two-layer design with integrated valves which allows fast solution exchange in less than 20 s and on separate sub-populations of the trapped vesicles. We demonstrate that multiple experiments can be performed in a single chip with both membrane transport and permeabilization assays. In conclusion, we have developed a versatile all-in-one microfluidic chip with capabilities to produce and perform multiple experiments on a single batch of vesicles using low sample volumes. We expect this device will be highly advantageous for bottom-up synthetic biology where rapid encapsulation and visualization is required for enzymatic reactions.

AGGRESSIVE BEHAVIORS AND THEIR EFFECT ON RESOURCE USE BY MALE LITTLE BROWN SKINKS, SCINCELLA LATERALIS

The aggressive behaviors of adult male Little Brown Skinks, Scincella lateralis, and their effects on access to an important resource (a single retreat) were the subject of a study consisting of 10 laboratory trials in which the behavioral interactions between a pair of individuals was recorded. Analysis of these interactions made it possible to identify a dominant and a subordinate male in each trial; the male with the greater bulk was dominant in 9 of the 10 trials. Aggressive behaviors recorded include lunging, chasing, and biting; the dominant male performed lunging significantly more often than the subordinate male and was the only individual to exhibit chasing. The most common behavior recorded was avoidance which was shown almost exclusively by the subordinate male. Both dominant and subordinate males exhibited tail twitching which we hypothesize to be a sign of agitation. The two males spent significantly more time on opposite sides of the observation chamber than on the same side and almost never occupied the single retreat simultaneously because the subordinate male repeatedly moved to avoid the dominant male. The implications of these results on spacing patterns and resource use of Scincella lateralis in the wild are discussed.

The role of visual cues in learning escape behaviour in the little brown skink (Scincella lateralis)

Many small animals escape predators by running under an escape retreat such as a rock, log, or pile of leaves. Rapid escape to a retreat would be facilitated if the animal already learned the location of the retreat before it ever had to flee from a predator. One way a small animal might do this is to attend to a prominent ‘local cue’, that is, a visual cue that is part of, or contiguous with, the retreat. I tested the hypothesis that a small lizard commonly known as the little brown skink, Scincella lateralis, can use a local visual cue to learn an escape behaviour. Little brown skinks were presented with two retreats side-by side in an observation chamber. One retreat was backed with a vertical striped cue and the other backed with a horizontal striped cue. Each lizard was induced to run from one end of the observation tank to the opposite end with the two retreats; the retreat that each lizard chose for escape was recorded through a series of 15 trials conducted over three days. Half of the lizards were trained to escape to the vertical cue retreat; half were trained to escape to the horizontal cue retreat. About one-third of little brown skinks met the learning criterion of escaping to the correct retreat in five consecutive trials. However, significantly more of the vertical cue lizards met the learning criterion than did horizontal cue lizards. Also, the vertical cue lizards escaped to the correct retreat significantly more often than expected by chance. Furthermore, even the horizontal cue lizards showed a preference for escaping to the vertical cue retreat. This suggests little brown skinks can use a local visual cue to learn an escape behaviour, but only if it a vertical cue. This may be related to the use of a vertical cue to obtain positional information to locate a retreat or perhaps to the tendency of this forest species to attend to abundant vertical cues in its habitat.

Survey of Neodohrniphora spp. (Diptera: Phoridae) at colonies of Atta sexdens rubropilosa (FOREL) and specificity of attack behaviour in relation to their hosts

Atta sexdens rubropilosa is a leaf-cutting ant that is a significant agricultural and forestry pest in the Neotropical region. This ant is parasitized by flies from the genera Neodohrniphora spp., Apocephalus spp. and Myrmosicarius spp. This study was carried out to determine which species of Neodohrniphora spp. are found near foraging trails of Atta sexdens rubropilosa and to evaluate the specificity of attack behaviour of these parasitoids. From May 2002 to April 2004, we sampled Neodohrniphora spp. hovering over foraging trails of Atta sexdens rubropilosa between 8:00 and 11:00 h and between 15:00 and 18:00 h. To investigate the attacking behaviour against the ants, flies were released individually inside an observation chamber containing a single leaf-cutting ant worker. Each parasitoid was confronted successively with a worker ant of A. sexdens rubropilosa, Atta laevigata Smith, Acromyrmex crassispinus Forel and Acromyrmex subterraneus molestans Santschi. Phorids of three species were identified: Neodohrniphora elongata Brown, Neodohrniphora declinata Borgmeier and Neodohrniphora tonhascai Brown. The three phorid species were active throughout the year and often along the same foraging trails, but N. elongata was the most frequent species. In the laboratory assay, N. elongata, N. declinata and N. tonhascai attacked workers of A. sexdens rubropilosa, A. laevigata and A. crassispinus, but not of A. subterraneus molestans.