Congruence of random amplification of polymorphic deoxyribonucleic acid (RAPD) and simple sequence repeats (SSR) markers in genetic characterization of willow (Salix spp.)

2014 ◽  
Vol 13 (32) ◽  
pp. 3217-3229
Author(s):  
Kumar Singh Manoj ◽  
Bahadur Singh Naresh ◽  
Paul Sankhyan Hari ◽  
Kumar Naik Pradeep
Keyword(s):  
Ssr Markers ◽  
Simple Sequence Repeats ◽  
Deoxyribonucleic Acid ◽  
Genetic Characterization ◽  
Random Amplification ◽  
Simple Sequence ◽  
Salix Spp

scholarly journals Primer Note: A novel set of EST-SSR markers in Tamarix: a resource to characterize this genus

2013 ◽  
Vol 62 (1-6) ◽  
pp. 104-109 ◽  
Author(s):  
S. Terzoli ◽  
E. Cattan ◽  
M. Sabatti ◽  
R. Valentini ◽  
A. Zilberstain ◽  
...  
Keyword(s):  
Ssr Markers ◽  
Expressed Sequence Tag ◽  
Genetic Characterization ◽  
Ecological Impact ◽  
Expected Heterozygosity ◽  
Desert Habitat ◽  
The Mean ◽  
Expressed Sequence ◽  
Simple Sequence

Abstract Both the negative and positive ecological impact of Tamarix plants is controversial, and thus a more comprehensive understanding is necessary. Tamarisks are invasive in many countries but the inter-specific transferability that characterizes simple sequence repeats (SSRs) could be harnessed to track the spread of specific genotypes or to study invasive populations. Thirteen polymorphic SSR markers, derived from expressed sequence tag (EST), were identified by first screening 26 samples of T. aphylla, T. jordanis, T. nilotica, and T. tetragyna and then 33 unidentified tamarisks from Yotvata, Israel. The mean number of alleles per locus ranged from two to 14 and the mean expected heterozygosity was 0.415. These EST-SSR markers will undoubtedly be useful in the genetic characterization of the genus Tamarix due to their high cross-species transferability which enables the estimation of the genetic diversity among and within different species, that are adapted to the same desert habitat under severe environmental constraints.

scholarly journals Isolation and Characterization of Simple Sequence Repeats (SSR) Markers from the Moss Genus Orthotrichum Using a Small Throughput Pyrosequencing Machine

2012 ◽  
Vol 13 (6) ◽  
pp. 7586-7593 ◽  
Author(s):  
Jakub Sawicki ◽  
Mirosław Kwaśniewski ◽  
Monika Szczecińska ◽  
Karolina Chwiałkowska ◽  
Monika Milewicz ◽  
...  
Keyword(s):  
Ssr Markers ◽  
Simple Sequence Repeats ◽  
Isolation And Characterization ◽  
Simple Sequence

scholarly journals Genetic characterization of cassava ( Manihot esculenta ) landraces in Brazil assessed with simple sequence repeats

2009 ◽  
Vol 32 (1) ◽  
pp. 104-110 ◽  
Author(s):  
Marcos V. B. M. Siqueira ◽  
Jurema R. Queiroz-Silva ◽  
Eduardo A. Bressan ◽  
Aline Borges ◽  
Kayo J. C. Pereira ◽  
...  
Keyword(s):  
Simple Sequence Repeats ◽  
Manihot Esculenta ◽  
Genetic Characterization ◽  
Simple Sequence
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