First report of Hericium cirrhatum from Pakistan

Mycotaxon ◽  
2020 ◽  
Vol 135 (4) ◽  
pp. 845-852
Author(s):  
Junaid Khan ◽  
Hassan Sher ◽  
Shah Hussain ◽  
Abdul Nasir Khalid
Keyword(s):  
Dna Sequence ◽  
Internal Transcribed Spacer ◽  
Morphological Characters ◽  
Sequence Analyses ◽  
Internal Transcribed Spacer Region ◽  
First Report ◽  
First Time

Hericium cirrhatum, a widespread but locally rare tooth fungus is reported for the first time from Pakistan. This species is characterized by white to cream semicircular basidiomata (usually arranged in tiers) with a granular to slightly spiny sterile upper surface, a fertile under surface with 10–15 mm long pointed spines, and ellipsoid to subglobose basidiospores. Morphological characters and DNA sequence analyses inferred from the nuclear ribosomal internal transcribed spacer region (nrITS) confirm the identity of the taxon.

scholarly journals Diversity of Diatrypaceae Species Associated with Dieback of Grapevines in South Africa, with the Description of Eutypa cremea sp. nov.

Plant Disease ◽  
2018 ◽  
Vol 102 (1) ◽  
pp. 220-230 ◽  
Author(s):  
Providence Moyo ◽  
Lizel Mostert ◽  
Christoffel F.J. Spies ◽  
Ulrike Damm ◽  
Francois Halleen
Keyword(s):  
South Africa ◽  
Cross Section ◽  
Internal Transcribed Spacer ◽  
Dominant Species ◽  
Phylogenetic Analyses ◽  
Morphological Characters ◽  
Internal Transcribed Spacer Region ◽  
Canker Pathogen ◽  
Grapevine Canker ◽  
First Time

Recent studies in grape-growing areas including Australia, California, and Spain have revealed an extensive diversity of Diatrypaceae species on grapevines showing dieback symptoms and cankers. However, in South Africa, little is known regarding the diversity of these species in vineyards. The aim of this study was, therefore, to identify and characterize Diatrypaceae species associated with dieback symptoms of grapevine in South Africa. Isolates were collected from dying spurs of grapevines aged 4 to 8 years old, grapevine wood showing wedge-shaped necrosis when cut in cross section as well as from perithecia on dead grapevine wood. The collected isolates were identified based on morphological characters and phylogenetic analyses of the internal transcribed spacer region (ITS) and β-tubulin gene. Seven Diatrypaceae species were identified on grapevine, namely Cryptovalsa ampelina, C. rabenhorstii, Eutypa consobrina, E. lata, E. cremea sp. nov., Eutypella citricola, and E. microtheca. The dying spurs yielded the highest diversity of species when compared with the wedge-shaped necrosis and/or perithecia. C. ampelina was the dominant species in the dying spurs, followed by E. citricola, whereas E. lata was the dominant species isolated from the wedge-shaped necroses and perithecia. These results confirm E. lata as an important grapevine canker pathogen in South Africa, but the frequent association of C. ampelina with spur dieback suggests that this pathogen plays a more prominent role in dieback than previously assumed. In some cases, more than one species were isolated from a single symptom, which suggests that interactions may be occurring leading to decline of grapevines. C. rabenhorstii, E. consobrina, E. citricola, E. microtheca, and E. cremea are reported for the first time on grapevine in South Africa.

First report and molecular prevalence of potential zoonotic Enterocytozoon bieneusi in Turkish tumbler pigeons (Columba livia domestica)

2021 ◽  
Author(s):  
Didem Pekmezci ◽  
Gamze Yetismis ◽  
Zeynep Nurselin Colak ◽  
Onder Duzlu ◽  
Gamze Nur Ozkilic ◽  
...  
Keyword(s):  
Internal Transcribed Spacer ◽  
Potential Role ◽  
Columba Livia ◽  
Enterocytozoon Bieneusi ◽  
Human Infection ◽  
Opportunistic Pathogens ◽  
Sequence Analyses ◽  
Internal Transcribed Spacer Region ◽  
First Report ◽  
Microsporidian Species

Abstract A total of 250 droppings of tumbler pigeons (Columba livia domestica, Columbidae) were collected individually from different breeders in Turkey, to investigate the presence and genotyping of microsporidian species by nested PCR and to reveal their zoonotic potential. In the present study, Enterocytozoon bieneusi was the only microsporidian species identified in 35 pigeons with an overall molecular prevalence of 14.0%. Only one known genotype zoonotic Peru6 was identified in all positive samples according to the sequence analyses of the internal transcribed spacer region of ribosomal DNA of E. bieneusi. This study represents the first report of E. bieneusi in pigeons in Turkey. Our study also confirms the competence of breeding pigeons as hosts for the zoonotic Peru6 genotype, corroborating its potential role as a source of human infection and environmental contamination. Lay summary Microsporidia are spore-producing fungi defined as emerging opportunistic pathogens of humans. The occurrence of microsporidia in animals could be risky for human public health. Home kept breeding pigeons pose a high risk for transmission of the microsporidians to humans.

scholarly journals First Report of Echinococcus ortleppi in Free-Living Wild Boar (Sus scrofa) from Portugal

2021 ◽  
Vol 9 (6) ◽  
pp. 1256
Author(s):  
Teresa Letra Mateus ◽  
Maria João Gargaté ◽  
Anabela Vilares ◽  
Idalina Ferreira ◽  
Manuela Rodrigues ◽  
...  
Keyword(s):  
Wild Boar ◽  
Internal Transcribed Spacer ◽  
Sus Scrofa ◽  
One Health ◽  
Control Strategies ◽  
Free Living ◽  
First Report ◽  
Wildlife Reservoirs ◽  
First Time ◽  
Echinococcus Granulosus Sensu Lato

Cystic echinococcosis (CE) is a zoonosis that is prevalent worldwide. It is considered endemic in Portugal but few studies have been performed on Echinococcus granulosus sensu lato and their hosts. In this study, CE cysts are reported for the first time in a free-living wild boar (Sus scrofa) in Portugal. The presence of the metacestodes in the liver of the wild boar was identified by morphological features, microscopic examination and molecular analysis. The sequencing of part of the DNA nuclear ribosomal internal transcribed spacer-1 (ITS-1) region revealed a G5 genotype that presently corresponds to Echinococcus ortleppi. This is the first report of E. ortleppi in Portugal and to the best of the authors’ knowledge, in Europe. These results suggest that wild boar may be a host of CE, namely, crossing the livestock–wildlife interface, which has important public health implications. Wildlife reservoirs must be taken into account as CE hosts and surveillance of game as well as health education for hunters should be implemented using a One Health approach, with implementation of feasible and tailor-made control strategies, namely, proper elimination of byproducts in the field.

scholarly journals Sequences of the second internal transcribed spacer of ribosomal DNA for three species of Trichostrongylus (Nematoda: Trichostrongylidae) from sheep in Russia

2007 ◽  
Vol 44 (2) ◽  
pp. 43-46 ◽  
Author(s):  
D. Kuznetsov ◽  
N. Kuznetsova
Keyword(s):  
Dna Sequence ◽  
Intraspecific Variation ◽  
Ribosomal Dna ◽  
Internal Transcribed Spacer ◽  
Sequence Data ◽  
Moscow Region ◽  
Dna Sequence Data ◽  
Interspecific Differences ◽  
Second Internal Transcribed Spacer ◽  
First Time

AbstractFor the first time, DNA sequence data were obtained for three species of Trichostrongylus from Russia. Internal transcribed spacer (ITS-2) of ribosomal DNA was sequenced for T. axei, T. colubriformis and T. probolurus from sheep from the Moscow region. ITS-2 rDNA length was estimated as 238 nucleotides for T. colubriformis and T. probolurus and 237 nucleotides for T. axei. The G+C content of the ITS-2 sequences of T. colubriformis, T. axei and T. probolurus were 31 %, 32 % and 34 % respectively. The level of interspecific differences in ITS-2 of rDNA of T. axei, T. probolurus and T. colubriformis ranged from 3 to 4 %. The ITS-2 sequences from the Russian specimens were compared with those of T. axei, T. probolurus and T. colubriformis from Australia and Germany. Intraspecific variation ranged from 0 % in T. colubriformis to 3.0 % in T. axei.

scholarly journals Amanita subjunquillea and its ectomycorrhizal association, reported as new for Pakistan

Mycotaxon ◽  
2019 ◽  
Vol 134 (3) ◽  
pp. 413-423
Author(s):  
Muhammad Ishaq ◽  
Arooj Naseer ◽  
Munazza Kiran ◽  
Muhammad Fiaz ◽  
Abdul Nasir Khalid
Keyword(s):  
Its Region ◽  
Morphological Characters ◽  
Molecular Data ◽  
Sequence Analyses ◽  
Dark Orange ◽  
Ectomycorrhizal Roots ◽  
Morphological And Molecular Data ◽  
Quercus Floribunda ◽  
First Time ◽  
Ectomycorrhizal Association

Amanita subjunquillea and its ectomycorrhizal association are reported for the first time from moist temperate Himalayan forests of Pakistan. The sample was studied based on morphological characters and nucleotide sequence analyses of the ITS region generated from basidiomata and ectomycorrhizal roots of Quercus floribunda. Our collection differs from the type in its dark orange pileus disc and pale yellow margins. Remaining morphological and molecular data are consistent with previously reported specimens. This represents the first report of A. subjunquillea from Pakistan.

Choiromyces cerebriformis (Tuberaceae), a new hypogeous species from Yunnan, China

Phytotaxa ◽  
2021 ◽  
Vol 482 (3) ◽  
pp. 251-260
Author(s):  
TIAN-JUN YUAN ◽  
OLIVIER RASPÉ ◽  
YONG-JUN LI ◽  
LI WANG ◽  
KAI-MEI SU ◽  
...  
Keyword(s):  
Related Species ◽  
Internal Transcribed Spacer ◽  
Yunnan Province ◽  
Genetic Distances ◽  
Morphological Evidence ◽  
Similar Species ◽  
Sequence Analyses ◽  
Internal Transcribed Spacer Region ◽  
Morphological Differences ◽  
Light Orange

A new hypogeous species, Choiromyces cerebriformis sp. nov. is described and illustrated from Yunnan province, China. Both morphological evidence and sequence analyses of the internal transcribed spacer region (ITS1-5.8S-ITS2) support the species as new to science. C. cerebriformis differs from other Choiromyces species in having ascomata with larger lobes and light orange-brown gleba, and globose ascospores with short stick-like sparse spines ornamentation. Morphological differences and genetic distances with the similar species C. helanshanensis and C. alveolatus are discussed. A phenotypic key including related species is provided.

scholarly journals Two new Chrysomyxa rust species on the endemic plant, Picea asperata in western China, and expanded description of C. succinea

Phytotaxa ◽  
2017 ◽  
Vol 292 (3) ◽  
pp. 218 ◽  
Author(s):  
JING CAO ◽  
CHENGMING TIAN ◽  
YINGMEI LIANG ◽  
CHONGJUAN YOU
Keyword(s):  
Phylogenetic Trees ◽  
Sequence Data ◽  
Morphological Characters ◽  
Western China ◽  
Endemic Plant ◽  
Internal Transcribed Spacer Region ◽  
Dna Sequence Data ◽  
Species Cluster ◽  
Picea Asperata ◽  
First Time

Two new rust species, Chrysomyxa diebuensis and C. zhuoniensis, on Picea asperata are recognized by morphological characters and DNA sequence data. A detailed description, illustrations, and discussion concerning morphologically similar and phylogenetically closely related species are provided for each species. From light and scanning electron microscopy observations C. diebuensis is characterized by the nailhead to peltate aeciospores, with separated stilt-like base. C. zhuoniensis differs from other known Chrysomyxa species in the annulate aeciospores with distinct longitudinal smooth cap at ends of spores, as well as with a broken, fissured edge. Analysis based on internal transcribed spacer region (ITS) partial gene sequences reveals that the two species cluster as a highly supported group in the phylogenetic trees. Correlations between the morphological and phylogenetic features are discussed. Illustrations and a detailed description are also provided for the aecia of C. succinea in China for the first time.

First Report of Macrophomina phaseolina Causing Leaf and Stem Blight of Tropical Soda Apple in Florida

2007 ◽  
Vol 8 (1) ◽  
pp. 40 ◽  
Author(s):  
Fanny Iriarte ◽  
Erin Rosskopf ◽  
Mark Hilf ◽  
Greg McCollum ◽  
Joe Albano ◽  
...  
Keyword(s):  
Internal Transcribed Spacer ◽  
Macrophomina Phaseolina ◽  
Vegetable Crops ◽  
Stem Tissue ◽  
Internal Transcribed Spacer Region ◽  
First Report ◽  
Stem Blight ◽  
Leaf Necrosis ◽  
Tropical Soda Apple ◽  
Noxious Weed

Leaf necrosis was observed in tropical soda apple plants in Fort Pierce, FL. A fungus was isolated from symptomatic stem tissue and from numerous excised pycnidia. Identity was confirmed by analysis of the sequence of the internal transcribed spacer region, and Koch's postulates were completed. To the best of our knowledge this is the first report of M. phaseolina as a pathogen of S. viarum. This report provides further evidence of this noxious weed serving as a reservoir for potential pathogens of vegetable crops. Accepted for publication 25 September 2007. Published 15 November 2007.

scholarly journals Three new species of Dicephalospora from China as revealed by morphological and molecular evidences

MycoKeys ◽  
2019 ◽  
Vol 55 ◽  
pp. 87-99
Author(s):  
Huan-Di Zheng ◽  
Wen-Ying Zhuang
Keyword(s):  
New Species ◽  
Dna Sequence ◽  
Maximum Parsimony ◽  
Morphological Characters ◽  
Neighbor Joining ◽  
Sequence Analyses ◽  
Three New Species ◽  
Yellowish White

Three new species of Dicephalospora are introduced based on morphological characters and DNA sequence analyses (maximum parsimony and neighbor-joining methods), viz. D.albolutea, D.shennongjiana, and D.yunnanica. All of them lack mucilaginous caps at ascospore poles. Dicephalosporaalbolutea is distinguished by cream to yellowish white apothecia and slightly curved ascospores. Dicephalosporashennongjiana is characterized by yellow apothecia, elliptical-fusoid ascospores 19−22 × 7−8.8 μm, and J+ asci 130−150 × 14−16.5 μm. Dicephalosporayunnanica is distinguished by orange apothecia and fusoid ascospores 16.5−25.3 × 3.3−3.5 μm. Descriptions and illustrations of the new species as well as a key to the known species in the genus are provided.

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