scholarly journals Bioconversion of Biologically Active Indole Derivatives with Indole-3-Acetic Acid-Degrading Enzymes from Caballeronia glathei DSM50014

Biomolecules ◽  
2020 ◽  
Vol 10 (4) ◽  
pp. 663 ◽  
Author(s):  
Mikas Sadauskas ◽  
Roberta Statkevičiūtė ◽  
Justas Vaitekūnas ◽  
Rolandas Meškys
Keyword(s):  
Acetic Acid ◽  
Propionic Acid ◽  
Butyric Acid ◽  
Sole Source ◽  
Degradation Pathway ◽  
Reaction Scheme ◽  
Biologically Active ◽  
Indole Derivatives ◽  
Wide Range ◽  
Indole 3 Acetic Acid

A plant auxin hormone indole-3-acetic acid (IAA) can be assimilated by bacteria as an energy and carbon source, although no degradation has been reported for indole-3-propionic acid and indole-3-butyric acid. While significant efforts have been made to decipher the Iac (indole-3-acetic acid catabolism)-mediated IAA degradation pathway, a lot of questions remain regarding the mechanisms of individual reactions, involvement of specific Iac proteins, and the overall reaction scheme. This work was aimed at providing new experimental evidence regarding the biodegradation of IAA and its derivatives. Here, it was shown that Caballeronia glathei strain DSM50014 possesses a full iac gene cluster and is able to use IAA as a sole source of carbon and energy. Next, IacE was shown to be responsible for the conversion of 2-oxoindole-3-acetic acid (Ox-IAA) intermediate into the central intermediate 3-hydroxy-2-oxindole-3-acetic acid (DOAA) without the requirement for IacB. During this reaction, the oxygen atom incorporated into Ox-IAA was derived from water. Finally, IacA and IacE were shown to convert a wide range of indole derivatives, including indole-3-propionic acid and indole-3-butyric acid, into corresponding DOAA homologs. This work provides novel insights into Iac-mediated IAA degradation and demonstrates the versatility and substrate scope of IacA and IacE enzymes.

scholarly journals Enhanced lipid production by Yarrowia lipolytica cultured with synthetic and waste-derived high-content volatile fatty acids under alkaline conditions

2020 ◽  
Vol 13 (1) ◽  
Author(s):  
Ruiling Gao ◽  
Zifu Li ◽  
Xiaoqin Zhou ◽  
Wenjun Bao ◽  
Shikun Cheng ◽  
...  
Keyword(s):  
Fatty Acids ◽  
Acetic Acid ◽  
Propionic Acid ◽  
Yarrowia Lipolytica ◽  
Butyric Acid ◽  
Lipid Content ◽  
Volatile Fatty Acids ◽  
Lipid Production ◽  
Initial Ph ◽  
Alkaline Conditions

Abstract Background Volatile fatty acids (VFAs) can be effective and promising alternate carbon sources for microbial lipid production by a few oleaginous yeasts. However, the severe inhibitory effect of high-content (> 10 g/L) VFAs on these yeasts has impeded the production of high lipid yields and their large-scale application. Slightly acidic conditions have been commonly adopted because they have been considered favorable to oleaginous yeast cultivation. However, the acidic pH environment further aggravates this inhibition because VFAs appear largely in an undissociated form under this condition. Alkaline conditions likely alleviate the severe inhibition of high-content VFAs by significantly increasing the dissociation degree of VFAs. This hypothesis should be verified through a systematic research. Results The combined effects of high acetic acid concentrations and alkaline conditions on VFA utilization, cell growth, and lipid accumulation of Yarrowia lipolytica were systematically investigated through batch cultures of Y. lipolytica by using high concentrations (30–110 g/L) of acetic acid as a carbon source at an initial pH ranging from 6 to 10. An initial pH of 8 was determined as optimal. The highest biomass and lipid production (37.14 and 10.11 g/L) were obtained with 70 g/L acetic acid, whereas cultures with > 70 g/L acetic acid had decreased biomass and lipid yield due to excessive anion accumulation. Feasibilities on high-content propionic acid, butyric acid, and mixed VFAs were compared and evaluated. Results indicated that YX/S and YL/S of cultures on butyric acid (0.570, 0.144) were comparable with those on acetic acid (0.578, 0.160) under alkaline conditions. The performance on propionic acid was much inferior to that on other acids. Mixed VFAs were more beneficial to fast adaptation and lipid production than single types of VFA. Furthermore, cultures on food waste (FW) and fruit and vegetable waste (FVW) fermentate were carried out and lipid production was effectively improved under this alkaline condition. The highest biomass and lipid production on FW fermentate reached 14.65 g/L (YX/S: 0.414) and 3.20 g/L (YL/S: 0.091) with a lipid content of 21.86%, respectively. By comparison, the highest biomass and lipid production on FVW fermentate were 11.84 g/L (YX/S: 0.534) and 3.08 g/L (YL/S: 0.139), respectively, with a lipid content of 26.02%. Conclusions This study assumed and verified that alkaline conditions (optimal pH 8) could effectively alleviate the lethal effect of high-content VFA on Y. lipolytica and significantly improve biomass and lipid production. These results could provide a new cultivation strategy to achieve simple utilizations of high-content VFAs and increase lipid production. Feasibilities on FW and FVW-derived VFAs were evaluated, and meaningful information was provided for practical applications.

scholarly journals Impact of Alkaline Pretreatment to Enhance Volatile Fatty Acids (VFAs) Production from Rice Husk

2019 ◽  
Vol 2019 ◽  
pp. 1-8 ◽  
Author(s):  
Qian Fang ◽  
Sinmin Ji ◽  
Dingwu Huang ◽  
Zhouyue Huang ◽  
Zilong Huang ◽  
...  
Keyword(s):  
Fatty Acids ◽  
Acetic Acid ◽  
Propionic Acid ◽  
Butyric Acid ◽  
Rice Husk ◽  
Volatile Fatty Acids ◽  
Alkaline Pretreatment ◽  
Rice Husks ◽  
Acid Fermentation ◽  
Study Results

This study explores the use of alkaline pretreatments to improve the hydrolyzation of rice husks to produce volatile fatty acids (VFAs). The study investigated the effects of reagent concentration and pretreatment time on protein, carbohydrates, and dissolved chemical oxygen demand (SCOD) dissolution after the pretreatment. The optimum alkaline pretreatment conditions were 0.30 g NaOH (g VS)−1, with a reaction time of 48 h. The experimental results show that when comparing the total VFA (TVFA) yields from the alkaline-pretreated risk husk with those from the untreated rice husk, over 14 d and 2 d, the maximum value reached 1237.7 and 716.0 mg·L−1 with acetic acid and propionic acid and with acetic acid and butyric acid, respectively. After the alkaline pretreatment, TVFAs increased by 72.9%; VFA accumulation grew over time. The study found that alkaline pretreatment can improve VFA yields from rice husks and transform butyric acid fermentation into propionic acid fermentation. The study results can provide guidelines to support the comprehensive utilization of rice husk and waste treatment.

Identification of the volatile fatty acid in the peripheral blood and rumen of cattle and the blood of other species

1951 ◽  
Vol 2 (1) ◽  
pp. 92 ◽  
Author(s):  
GL McClymont
Keyword(s):  
Acetic Acid ◽  
Fatty Acid ◽  
Propionic Acid ◽  
Butyric Acid ◽  
Peripheral Blood ◽  
Molecular Basis ◽  
Volatile Fatty Acid ◽  
Volatile Fatty Acids ◽  
Bovine Blood ◽  
Mean Values

Volatile fatty acid isolated from nine samples of peripheral blood from four cows contained, on a molecular basis, from 90.0 to 97.0 per cent. of acetic acid (mean 93.3 per cent.). The remainder comprised, as mean values, propionic acid, 2.39 per cent.; butyric acid, 2.61 per cent.; and a group of at least three acids between butyric and octanoic, 1.84 per cent. The significance of the high proportion of acetic acid in the volatile fatty acid of bovine peripheral blood is discussed. Only traces of esterified acids lower than octanoic could be found in bovine blood lipides. Volatile fatty acids were found also in the blood of the rabbit, guinea pig, horse, and pig and in human plasma. Here again a high proportion of acetic acid was recorded. Volatile fatty acid isolated from nine samples of ruminal contents from two cows contained on a molecular basis from 52.3 to 69.0 per cent. of acetic acid (mean 60.0 per cent.). The remainder comprised, as mean values, propionic acid, 21.8 per cent.; butyric acid, 14.4 per cent.; and acids higher than butyric (apparently largely valeric and hesanoic), 3.8 per cent. This limited number of analyses indicated no gross effect of type of feed on the proportion of the acids in the rumen.

scholarly journals Biosynthesis of Auxin by the Gram-Positive Phytopathogen Rhodococcus fascians Is Controlled by Compounds Specific to Infected Plant Tissues

2005 ◽  
Vol 71 (3) ◽  
pp. 1169-1177 ◽  
Author(s):  
Olivier Vandeputte ◽  
Sevgi Öden ◽  
Adeline Mol ◽  
Danny Vereecke ◽  
Koen Goethals ◽  
...  
Keyword(s):  
Acetic Acid ◽  
Acid Production ◽  
Infected Plant ◽  
Growth Media ◽  
Acid Biosynthesis ◽  
Gram Positive ◽  
Acetic Acid Production ◽  
Rhodococcus Fascians ◽  
Wide Range ◽  
Indole 3 Acetic Acid

ABSTRACT The role and metabolism of indole-3-acetic acid in gram-negative bacteria is well documented, but little is known about indole-3-acetic acid biosynthesis and regulation in gram-positive bacteria. The phytopathogen Rhodococcus fascians, a gram-positive organism, incites diverse developmental alterations, such as leafy galls, on a wide range of plants. Phenotypic analysis of a leafy gall suggests that auxin may play an important role in the development of the symptoms. We show here for the first time that R. fascians produces and secretes the auxin indole-3-acetic acid. Interestingly, whereas noninfected-tobacco extracts have no effect, indole-3-acetic acid synthesis is highly induced in the presence of infected-tobacco extracts when tryptophan is not limiting. Indole-3-acetic acid production by a plasmid-free strain shows that the biosynthetic genes are located on the bacterial chromosome, although plasmid-encoded genes contribute to the kinetics and regulation of indole-3-acetic acid biosynthesis. The indole-3-acetic acid intermediates present in bacterial cells and secreted into the growth media show that the main biosynthetic route used by R. fascians is the indole-3-pyruvic acid pathway with a possible rate-limiting role for indole-3-ethanol. The relationship between indole-3-acetic acid production and the symptoms induced by R. fascians is discussed.

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