A BAC contig map over the proximal ∼3.3 Mb region of horse chromosome 21

2008 ◽  
Vol 120 (1-2) ◽  
pp. 164-172 ◽  
Author(s):  
C. Brinkmeyer-Langford ◽  
T. Raudsepp ◽  
A. Gustafson-Seabury ◽  
B.P. Chowdhary
Keyword(s):  
Chromosome 21 ◽  
Bac Contig ◽  
Contig Map

Homology-Driven Assembly of a Sequence-Ready Mouse BAC Contig Map Spanning Regions Related to the 46-Mb Gene-Rich Euchromatic Segments of Human Chromosome 19

Genomics ◽  
2001 ◽  
Vol 74 (2) ◽  
pp. 129-141 ◽  
Author(s):  
Joomyeong Kim ◽  
Laurie Gordon ◽  
Paramvir Dehal ◽  
Hummy Badri ◽  
Mari Christensen ◽  
...  
Keyword(s):  
Human Chromosome ◽  
Chromosome 19 ◽  
Bac Contig ◽  
Contig Map ◽  
Human Chromosome 19

A BAC Contig Map of the Ly49 Gene Cluster in 129 Mice Reveals Extensive Differences in Gene Content Relative to C57BL/6 Mice

Genomics ◽  
2002 ◽  
Vol 79 (3) ◽  
pp. 437-444 ◽  
Author(s):  
Andrew P Makrigiannis ◽  
Amanda T Pau ◽  
Pamela L Schwartzberg ◽  
Daniel W McVicar ◽  
Thomas W Beck ◽  
...  
Keyword(s):  
Gene Cluster ◽  
Gene Content ◽  
Bac Contig ◽  
Contig Map

An ordered BAC contig map of the equine major histocompatibility complex

2003 ◽  
Vol 102 (1-4) ◽  
pp. 189-195 ◽  
Author(s):  
A.L. Gustafson ◽  
R.L. Tallmadge ◽  
N. Ramlachan ◽  
D. Miller ◽  
H. Bird ◽  
...  
Keyword(s):  
Major Histocompatibility Complex ◽  
Major Histocompatibility ◽  
Bac Contig ◽  
Histocompatibility Complex ◽  
Contig Map

scholarly journals A 12-Mb Complete Coverage BAC Contig Map in Human Chromosome 16p13.1–p11.2

1999 ◽  
Vol 9 (8) ◽  
pp. 763-774 ◽  
Author(s):  
Yicheng Cao ◽  
Hyung Lyun Kang ◽  
Xuequn Xu ◽  
Mei Wang ◽  
So Hee Dho ◽  
...  
Keyword(s):  
Human Chromosome ◽  
Sequence Data ◽  
Physical Map ◽  
Software Tool ◽  
Complete Coverage ◽  
Bac Clone ◽  
Bac Contig ◽  
Bac Libraries ◽  
Map Data ◽  
Contig Map

We have constructed a complete coverage BAC contig map that spans a 12-Mb genomic segment in the human chromosome 16p13.1–p11.2 region. The map consists of 68 previously mapped STSs and 289 BAC clones, 51 of which—corresponding to a total of 7.721 Mb of genomic DNA—have been sequenced, and provides a high resolution physical map of the region. Contigs were initially built based mainly on the analysis of STS contents and restriction fingerprint patterns of the clones. To close the gaps, probes derived from BAC clone ends were used to screen deeper BAC libraries. Clone end sequence data obtained from chromosome 16-specific BACs, as well as from public databases, were used for the identification of BACs that overlap with fully sequenced BACs by means of sequence match. This approach allowed precise alignment of clone overlaps in addition to restriction fingerprint comparison. A freehand contig drawing software tool was developed and used to manage the map data graphically and generate a real scale physical map. The map we present here is ∼3.5 × deep and provides a minimal tiling path that covers the region in an array of contigous, overlapping BACs.

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