scholarly journals Segmentation of Overlapping Cervical Cells with Mask Region Convolutional Neural Network

2021 ◽  
Vol 2021 ◽  
pp. 1-10
Author(s):  
Jiajia Chen ◽  
Baocan Zhang
Keyword(s):  
Neural Network ◽  
Deep Learning ◽  
Convolutional Neural Network ◽  
State Of The Art ◽  
Cytological Analysis ◽  
Segmentation Method ◽  
Challenging Tasks ◽  
Diagnostic Technology ◽  
Cervical Cells ◽  
Bounding Boxes

The task of segmenting cytoplasm in cytology images is one of the most challenging tasks in cervix cytological analysis due to the presence of fuzzy and highly overlapping cells. Deep learning-based diagnostic technology has proven to be effective in segmenting complex medical images. We present a two-stage framework based on Mask RCNN to automatically segment overlapping cells. In stage one, candidate cytoplasm bounding boxes are proposed. In stage two, pixel-to-pixel alignment is used to refine the boundary and category classification is also presented. The performance of the proposed method is evaluated on publicly available datasets from ISBI 2014 and 2015. The experimental results demonstrate that our method outperforms other state-of-the-art approaches with DSC 0.92 and FPRp 0.0008 at the DSC threshold of 0.8. Those results indicate that our Mask RCNN-based segmentation method could be effective in cytological analysis.

scholarly journals Identifying Ethnics of People through Face Recognition: A Deep CNN Approach

2020 ◽  
Vol 2020 ◽  
pp. 1-7
Author(s):  
Ahmed Jawad A. AlBdairi ◽  
Zhu Xiao ◽  
Mohammed Alghaili
Keyword(s):  
Neural Network ◽  
Deep Learning ◽  
Face Recognition ◽  
Convolutional Neural Network ◽  
State Of The Art ◽  
Research Community ◽  
Facial Features ◽  
New Model ◽  
Image Dataset ◽  
Deep Cnn

The interest in face recognition studies has grown rapidly in the last decade. One of the most important problems in face recognition is the identification of ethnics of people. In this study, a new deep learning convolutional neural network is designed to create a new model that can recognize the ethnics of people through their facial features. The new dataset for ethnics of people consists of 3141 images collected from three different nationalities. To the best of our knowledge, this is the first image dataset collected for the ethnics of people and that dataset will be available for the research community. The new model was compared with two state-of-the-art models, VGG and Inception V3, and the validation accuracy was calculated for each convolutional neural network. The generated models have been tested through several images of people, and the results show that the best performance was achieved by our model with a verification accuracy of 96.9%.

scholarly journals Investigation of optimal configurations of a convolutional neural network for the identification of objects in real-time

2019 ◽  
pp. 417-423
Author(s):  
M A Isayev ◽  
D A Savelyev
Keyword(s):  
Neural Network ◽  
Neural Networks ◽  
Deep Learning ◽  
Convolutional Neural Network ◽  
Real Time ◽  
State Of The Art ◽  
Average Precision ◽  
The Core ◽  
Particular Solution ◽  
Optimal Configurations

The comparison of different convolutional neural networks which are the core of the most actual solutions in the computer vision area is considers in hhe paper. The study includes benchmarks of this state-of-the-art solutions by some criteria, such as mAP (mean average precision), FPS (frames per seconds), for the possibility of real-time usability. It is concluded on the best convolutional neural network model and deep learning methods that were used at particular solution.

scholarly journals A structure-based deep learning framework for protein engineering

2019 ◽  
Author(s):  
Raghav Shroff ◽  
Austin W. Cole ◽  
Barrett R. Morrow ◽  
Daniel J. Diaz ◽  
Isaac Donnell ◽  
...  
Keyword(s):  
Neural Network ◽  
Amino Acids ◽  
Deep Learning ◽  
Protein Engineering ◽  
Convolutional Neural Network ◽  
State Of The Art ◽  
A Priori ◽  
Novel Proteins ◽  
Learning Framework

AbstractWhile deep learning methods exist to guide protein optimization, examples of novel proteins generated with these techniques require a priori mutational data. Here we report a 3D convolutional neural network that associates amino acids with neighboring chemical microenvironments at state-of-the-art accuracy. This algorithm enables identification of novel gain-of-function mutations, and subsequent experiments confirm substantive phenotypic improvements in stability-associated phenotypes in vivo across three diverse proteins.

Unsupervised Representation High-Resolution Remote Sensing Image Scene Classification via Contrastive Learning Convolutional Neural Network

2021 ◽  
Vol 87 (8) ◽  
pp. 577-591
Author(s):  
Fengpeng Li ◽  
Jiabao Li ◽  
Wei Han ◽  
Ruyi Feng ◽  
Lizhe Wang
Keyword(s):  
Neural Network ◽  
Remote Sensing ◽  
Deep Learning ◽  
High Resolution ◽  
Convolutional Neural Network ◽  
State Of The Art ◽  
Remote Sensing Image ◽  
Scene Classification ◽  
Data Set ◽  
Unsupervised Deep Learning

Inspired by the outstanding achievement of deep learning, supervised deep learning representation methods for high-spatial-resolution remote sensing image scene classification obtained state-of-the-art performance. However, supervised deep learning representation methods need a considerable amount of labeled data to capture class-specific features, limiting the application of deep learning-based methods while there are a few labeled training samples. An unsupervised deep learning representation, high-resolution remote sensing image scene classification method is proposed in this work to address this issue. The proposed method, called contrastive learning, narrows the distance between positive views: color channels belonging to the same images widens the gaps between negative view pairs consisting of color channels from different images to obtain class-specific data representations of the input data without any supervised information. The classifier uses extracted features by the convolutional neural network (CNN)-based feature extractor with labeled information of training data to set space of each category and then, using linear regression, makes predictions in the testing procedure. Comparing with existing unsupervised deep learning representation high-resolution remote sensing image scene classification methods, contrastive learning CNN achieves state-of-the-art performance on three different scale benchmark data sets: small scale RSSCN7 data set, midscale aerial image data set, and large-scale NWPU-RESISC45 data set.

scholarly journals Global and Local Attention-Based Free-Form Image Inpainting

Sensors ◽  
2020 ◽  
Vol 20 (11) ◽  
pp. 3204
Author(s):  
S. M. Nadim Uddin ◽  
Yong Ju Jung
Keyword(s):  
Neural Network ◽  
Deep Learning ◽  
Convolutional Neural Network ◽  
State Of The Art ◽  
Image Inpainting ◽  
Experimental Results ◽  
Free Form ◽  
Local Similarity ◽  
Global And Local ◽  
Similarity Information

Deep-learning-based image inpainting methods have shown significant promise in both rectangular and irregular holes. However, the inpainting of irregular holes presents numerous challenges owing to uncertainties in their shapes and locations. When depending solely on convolutional neural network (CNN) or adversarial supervision, plausible inpainting results cannot be guaranteed because irregular holes need attention-based guidance for retrieving information for content generation. In this paper, we propose two new attention mechanisms, namely a mask pruning-based global attention module and a global and local attention module to obtain global dependency information and the local similarity information among the features for refined results. The proposed method is evaluated using state-of-the-art methods, and the experimental results show that our method outperforms the existing methods in both quantitative and qualitative measures.

scholarly journals Image Steganalysis via Diverse Filters and Squeeze-and-Excitation Convolutional Neural Network

Mathematics ◽  
2021 ◽  
Vol 9 (2) ◽  
pp. 189
Author(s):  
Feng Liu ◽  
Xuan Zhou ◽  
Xuehu Yan ◽  
Yuliang Lu ◽  
Shudong Wang
Keyword(s):  
Neural Network ◽  
Neural Networks ◽  
Deep Learning ◽  
Convolutional Neural Network ◽  
Convolutional Neural Networks ◽  
State Of The Art ◽  
Image Steganalysis ◽  
Process Information ◽  
Effective Network ◽  
Convolution Filters

Steganalysis is a method to detect whether the objects contain secret messages. With the popularity of deep learning, using convolutional neural networks (CNNs), steganalytic schemes have become the chief method of combating steganography in recent years. However, the diversity of filters has not been fully utilized in the current research. This paper constructs a new effective network with diverse filter modules (DFMs) and squeeze-and-excitation modules (SEMs), which can better capture the embedding artifacts. As the essential parts, combining three different scale convolution filters, DFMs can process information diversely, and the SEMs can enhance the effective channels out from DFMs. The experiments presented that our CNN is effective against content-adaptive steganographic schemes with different payloads, such as S-UNIWARD and WOW algorithms. Moreover, some state-of-the-art methods are compared with our approach to demonstrate the outstanding performance.

scholarly journals Automated Fruit Classification Using Deep Convolutional Neural Network

2020 ◽  
Vol 3 (2) ◽  
pp. 177-178
Author(s):  
John Jowil D. Orquia ◽  
El Jireh Bibangco
Keyword(s):  
Neural Network ◽  
Deep Learning ◽  
Convolutional Neural Network ◽  
New Technologies ◽  
Learning Algorithm ◽  
State Of The Art ◽  
Complex Model ◽  
Deep Convolutional Neural Network ◽  
Machine Learning Algorithm ◽  
Learning Models

Manual Fruit classification is the traditional way of classifying fruits. It is manual contact-labor that is time-consuming and often results in lesser productivity, inconsistency, and sometimes damaging the fruits (Prabha & Kumar, 2012). Thus, new technologies such as deep learning paved the way for a faster and more efficient method of fruit classification (Faridi & Aboonajmi, 2017). A deep convolutional neural network, or deep learning, is a machine learning algorithm that contains several layers of neural networks stacked together to create a more complex model capable of solving complex problems. The utilization of state-of-the-art pre-trained deep learning models such as AlexNet, GoogLeNet, and ResNet-50 was widely used. However, such models were not explicitly trained for fruit classification (Dyrmann, Karstoft, & Midtiby, 2016). The study aimed to create a new deep convolutional neural network and compared its performance to fine-tuned models based on accuracy, precision, sensitivity, and specificity.

scholarly journals XCM: An Explainable Convolutional Neural Network for Multivariate Time Series Classification

Mathematics ◽  
2021 ◽  
Vol 9 (23) ◽  
pp. 3137
Author(s):  
Kevin Fauvel ◽  
Tao Lin ◽  
Véronique Masson ◽  
Élisa Fromont ◽  
Alexandre Termier
Keyword(s):  
Neural Network ◽  
Time Series ◽  
Deep Learning ◽  
Convolutional Neural Network ◽  
Input Data ◽  
State Of The Art ◽  
Multivariate Time Series ◽  
Learning Approach ◽  
Multiple Domains ◽  
Post Hoc

Multivariate Time Series (MTS) classification has gained importance over the past decade with the increase in the number of temporal datasets in multiple domains. The current state-of-the-art MTS classifier is a heavyweight deep learning approach, which outperforms the second-best MTS classifier only on large datasets. Moreover, this deep learning approach cannot provide faithful explanations as it relies on post hoc model-agnostic explainability methods, which could prevent its use in numerous applications. In this paper, we present XCM, an eXplainable Convolutional neural network for MTS classification. XCM is a new compact convolutional neural network which extracts information relative to the observed variables and time directly from the input data. Thus, XCM architecture enables a good generalization ability on both large and small datasets, while allowing the full exploitation of a faithful post hoc model-specific explainability method (Gradient-weighted Class Activation Mapping) by precisely identifying the observed variables and timestamps of the input data that are important for predictions. We first show that XCM outperforms the state-of-the-art MTS classifiers on both the large and small public UEA datasets. Then, we illustrate how XCM reconciles performance and explainability on a synthetic dataset and show that XCM enables a more precise identification of the regions of the input data that are important for predictions compared to the current deep learning MTS classifier also providing faithful explainability. Finally, we present how XCM can outperform the current most accurate state-of-the-art algorithm on a real-world application while enhancing explainability by providing faithful and more informative explanations.

scholarly journals Person Re-Identification Using Convolutional Neural Network and Autoencoder Embedded on Frameworks Based on Siamese and Triplet Networks

2020 ◽  
Author(s):  
Fábia Isabella Pires Enembreck ◽  
Erikson Freitas de Morais ◽  
Marcella Scoczynski Ribeiro Martins
Keyword(s):  
Neural Network ◽  
Deep Learning ◽  
Convolutional Neural Network ◽  
State Of The Art ◽  
Identification Problem ◽  
Reference Image ◽  
Learning Techniques ◽  
Art Methods

Abstract The person re-identification problem addresses the task of identify if a person being watched by security cameras in surveillance environments has ever been in the scene. This problem is considered challenging, since the images obtained by cameras are subject to many variations, such as lighting, perspective and occlusions. This work aims to develop two robust approaches based on deep learning techniques for person re-identification, considering these variations. The first approach uses a Siamese neural network composed by two identical subnets. This model receives two input images that may or may not be from the same person. The second approach consists of a triplet neural network, with three identical subnets, which receives a reference image from a certain person, a second image from the same person and another image from a different person. Both approaches have identical subnets, composed by a convolutional neural network which extracts general characteristics from each image and an autoencoder model, responsible for addressing high variations that input images may undergo. To compare the developed networks, three datasets were used, and the accuracy and the CMC curve metrics were applied for the analysis. The experiments showed an improvement in the results with the use of the autoencoder in the subnets. Besides, Triplet Neural Network presented promising results in comparison with Siamese Neural Network and state-of-the-art methods.

scholarly journals Classification and Specific Primer Design for Accurate Detection of SARS-CoV-2 Using Deep Learning

2020 ◽  
Author(s):  
Alejandro Lopez-Rincon ◽  
Alberto Tonda ◽  
Lucero Mendoza-Maldonado ◽  
Daphne G.J.C. Mulders ◽  
Richard Molenkamp ◽  
...  
Keyword(s):  
Neural Network ◽  
Artificial Intelligence ◽  
Deep Learning ◽  
Convolutional Neural Network ◽  
State Of The Art ◽  
Diagnostic Methods ◽  
Neural Network Classifier ◽  
Explainable Artificial Intelligence ◽  
Primer Sets ◽  
Virus Strains

ABSTRACTIn this paper, deep learning is coupled with explainable artificial intelligence techniques for the discovery of representative genomic sequences in SARS-CoV-2. A convolutional neural network classifier is first trained on 553 sequences from available repositories, separating the genome of different virus strains from the Coronavirus family with considerable accuracy. The network’s behavior is then analyzed, to discover sequences used by the model to identify SARS-CoV-2, ultimately uncovering sequences exclusive to it. The discovered sequences are first validated on samples from other repositories, and proven able to separate SARS-CoV-2 from different virus strains with near-perfect accuracy. Next, one of the sequences is selected to generate a primer set, and tested against other state-of-the-art primer sets on existing datasets, obtaining competitive results. Finally, the primer is synthesized and tested on patient samples (n=6 previously tested positive), delivering a sensibility similar to routine diagnostic methods, and 100% specificity. In this paper, deep learning is coupled with explainable artificial intelligence techniques for the discovery of representative genomic sequences in SARS-CoV-2. A convolutional neural network classifier is first trained on 553 sequences from NGDC, separating the genome of different virus strains from the Coronavirus family with accuracy 98.73%. The network’s behavior is then analyzed, to discover sequences used by the model to identify SARS-CoV-2, ultimately uncovering sequences exclusive to it. The discovered sequences are validated on samples from NCBI and GISAID, and proven able to separate SARS-CoV-2 from different virus strains with near-perfect accuracy. Next, one of the sequences is selected to generate a primer set, and tested against other state-of-the-art primer sets, obtaining competitive results. Finally, the primer is synthesized and tested on patient samples (n=6 previously tested positive), delivering a sensibility similar to routine diagnostic methods, and 100% specificity. The proposed methodology has a substantial added value over existing methods, as it is able to both identify promising primer sets for a virus from a limited amount of data, and deliver effective results in a minimal amount of time. Considering the possibility of future pandemics, these characteristics are invaluable to promptly create specific detection methods for diagnostics.

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