Nitrogen fixation in woody residue of northern Rocky Mountain conifer forests

1987 ◽  
Vol 17 (10) ◽  
pp. 1283-1288 ◽  
Author(s):  
M. F. Jurgensen ◽  
M. J. Larsen ◽  
R. T. Graham ◽  
A. E. Harvey

N fixation rates, as estimated by the acetylene reduction technique, were determined for large woody residues on four old growth conifer sites in western Montana and northern Idaho. Residue loadings ranged from <50 Mg ha−1 on a warm, dry Douglas-fir site in Montana to >150 Mg ha−1 on a highly productive, wet, cedar–hemlock site in northern Idaho. Lignin and carbohydrate analyses indicated that wood on these sites was being decayed primarily by brown rot fungi. Ethylene production rates increased on all sites as wood decay progressed. Assuming that N-fixing bacteria were active for 180 days year−1, N fixed in woody residues ranged from a high of nearly 1.5 kg ha−1 year−1 on a cedar–hemlock site to a low of 0.16 kg ha−1 year−1 on a Douglas-fir site. The application of the N fixation results from this study to the northern Rocky Mountain region indicated that the majority of stands in the Douglas-fir, subalpine fir, and cedar–hemlock cover types would have N gains <0.5 kg ha−1 year−1. However, in some areas where residue loadings are heavy, such as overmature stands on cool, moist sites, or following harvesting, N gains could be much greater.

10.15788/8101 ◽  
2001 ◽  
Author(s):  
◽  
John Keck ◽  

Macrofungal communities of four altitudinal zones of the Northern Rocky Mountain region are described and compared with respect to species richness, production (g/100m2/yr), functional structure (mycorrhizal vs. decomposer), seasonality of activity and relationship to temperature and rainfall. Two study sites of 100m2 were established in grasslands, Douglas-fir forest, subalpine fir (spruce-fir) forest and in the alpine. Each study site was visited fortnightly during the collecting season (May-September) in 1997 and 1998, monthly in 1999, with a limited number of trips to the alpine. All fungal sporocarps were collected, dried, weighed, and identified to species when possible. Soil moisture and soil temperature readings were taken at each visit during 1997 and 1998. Species richness varied with the elevational gradient from three species collected in grasslands, 60 species collected in Douglas-fir forests, 61 species collected in subalpine fir forests, and zero species collected in the alpine. Sixty-five species (out of 100 total species) fruited only during the wettest year of the study, 1997. Standing crop estimates ranged from 0.0002 to 0.005 g/100m2 in grassland, 0.01 to 2.16 g/100m2 in Douglas-fir forests, 0.04 to 1.63 g/100m2 in subalpine fir (spruce-fir forests) and no sporocarps were collected in the alpine. Standing crop was greatest in the grassland and forest sites in the wettest year, 1997. Species richness and production peaked earlier in the Douglas-fir forests (June), than in subalpine fir forests (August and September). With the majority of fungal species in the study fruiting only in the wettest year (1997), one might conclude that collecting sporocarps in a wet year provides a better indication of species richness than collecting in several typical (dry) years. The 100m2 plot size used in this study may bias for the sampling of saprophytic species, and may under-sample the more patchily distributed mycorrhizal species.


1983 ◽  
Vol 61 (1) ◽  
pp. 171-173 ◽  
Author(s):  
E. L. Schmidt ◽  
D. W. French

Successive collections of basidiospores, produced in culture from the same hymenial areas of four species of wood decay fungi, were tested for spore germination percentage on malt extract agar under controlled conditions. Spores from white rot fungi retained high germination levels after 5 weeks of spore production, but germination averages for brown rot fungi decreased by more than 50%. Such variation should be considered in wood pathology research using spore germination bioassay.


1962 ◽  
Vol 94 (1) ◽  
pp. 17-25 ◽  
Author(s):  
L. H. McMullen ◽  
M. D. Atkins

The Douglas-fir engraver, Scolytus unispinosus Leconte, is a common bark beetle throughout the Pacific Coast and Rocky Mountain Region of North America. Although it occasionally kills young trees (Chamberlin, 1939), it is of minor economic importance, usually confining its attack to tops, limbs and logging slash. In standing timber it acts primarily as a secondary insect, attacking the tops and branches of trees killed or severely weakened by other agents. In the interior of British Columbia it is commonly found in Douglas fir, Pseudotsuga menziesii (Mirb.) Franco, and thus it is of interest as an associate of the Douglas-fir beetle, Dendroctonus pseudotsugae Hopk. Two other bark beetles Pseudohylesinus nebulosus (Leconte) and Scolytus tsugae (Swaine) with similar associations were studied earlier (Walters and McMullen, 1956; McMullen and Atkins, 1959).


2016 ◽  
Vol 113 (39) ◽  
pp. 10968-10973 ◽  
Author(s):  
Jiwei Zhang ◽  
Gerald N. Presley ◽  
Kenneth E. Hammel ◽  
Jae-San Ryu ◽  
Jon R. Menke ◽  
...  

Wood-degrading brown rot fungi are essential recyclers of plant biomass in forest ecosystems. Their efficient cellulolytic systems, which have potential biotechnological applications, apparently depend on a combination of two mechanisms: lignocellulose oxidation (LOX) by reactive oxygen species (ROS) and polysaccharide hydrolysis by a limited set of glycoside hydrolases (GHs). Given that ROS are strongly oxidizing and nonselective, these two steps are likely segregated. A common hypothesis has been that brown rot fungi use a concentration gradient of chelated metal ions to confine ROS generation inside wood cell walls before enzymes can infiltrate. We examined an alternative: that LOX components involved in ROS production are differentially expressed by brown rot fungi ahead of GH components. We used spatial mapping to resolve a temporal sequence inPostia placenta, sectioning thin wood wafers colonized directionally. Among sections, we measured gene expression by whole-transcriptome shotgun sequencing (RNA-seq) and assayed relevant enzyme activities. We found a marked pattern of LOX up-regulation in a narrow (5-mm, 48-h) zone at the hyphal front, which included many genes likely involved in ROS generation. Up-regulation of GH5 endoglucanases and many other GHs clearly occurred later, behind the hyphal front, with the notable exceptions of two likely expansins and a GH28 pectinase. Our results support a staggered mechanism for brown rot that is controlled by differential expression rather than microenvironmental gradients. This mechanism likely results in an oxidative pretreatment of lignocellulose, possibly facilitated by expansin- and pectinase-assisted cell wall swelling, before cellulases and hemicellulases are deployed for polysaccharide depolymerization.


IAWA Journal ◽  
1993 ◽  
Vol 14 (2) ◽  
pp. 127-138 ◽  
Author(s):  
W. Wayne Wilcox

Early stages of decay by two brown-rot fungi in two woods were studied by light and scanning electron microscopy. The earliest diagnostic feature to appear was hyphae in the earlywood lumina. The earliest effect on cell walls was the loss of birefringence in the earlywood; Poria placenta (syn. Postia placenta) caused this loss at the earliest stage of decay observed, in both Douglas-fir and white fir, while Gloeophyllum trabeum caused significant weight loss before loss of birefringence was visible. Attack on the latewood progressed from the earlywood, and was different in pattern among the wood/fungus combinations. Hyphal and bore hole diameter increased throughout the early progression of decay and would be useful in evaluating the stage of decay, if the starting diameter of hyphae could be determined. Separation between cells was not observed until moderate stages of decay and, therefore, was not useful in diagnosing early stages of decay.


1990 ◽  
Vol 20 (6) ◽  
pp. 686-695 ◽  
Author(s):  
Robert A. Monserud ◽  
Ula Moody ◽  
David W. Breuer

A soil-site study was conducted for inland Douglas-fir growing in northern Idaho and north western Montana. The hypothesis was that standard soil survey procedures would provide edaphic data that could predict site index in the absence of site trees. Soil profile descriptions and physical analyses were obtained on 133 plots, along with several physiographic site descriptors. Chemical analyses were performed on soil samples from a third of these plots, and moisture availability was determined on 60% of the plots. Site index was based on felled-tree stem analyses. Elevation was the strongest predictor, accounting for a third of the variation in site index. The addition of habitat type information resulted in a significant improvement (as did longitude and precipitation), but still left over half the variation unexplained. After examining numerous soil properties the standard error could only be reduced 0.3 m, a disappointing result in light of the considerable time and expense necessary for soil sampling. The causes of these low soil–site correlations could not be conclusively determined, but the most likely explanations are (i) that the number of important site factor interactions occurring in this large and complex study area far exceeded the sample size, and (ii) failure to measure the true causes of site productivity.


IAWA Journal ◽  
2000 ◽  
Vol 21 (2) ◽  
pp. 135-155 ◽  
Author(s):  
Yoon Soo Kim ◽  
Adya P. Singh

Wood in wet environments is attacked and degraded by soft rot fungi and erosion and tunnelling bacteria, which are more tolerant to high moisture and reduced oxygen conditions than basidiomycetes, such as white and brown rot fungi. Since wood decaying basidiomycete fungi are normally more aggressive and can degrade wood faster than soft rot fungi and bacteria, wood in wet environments can survive for a relatively long time. Archaeological investigations show that wood buried deep in ocean sediments can survive for hundreds and even thousands of years. In this review degradation patterns of various types of microbial wood decay are briefly described, and examples of decay type(s) in wood exposed in various wet environments presented. It is important to understand biological wood decay in wet environments in order to find appropriate ways to prolong woodʼs service life and properly restore wooden artefacts.


1938 ◽  
Vol 70 (9) ◽  
pp. 188-197 ◽  
Author(s):  
W. D. Bedard

This list is a record of insects which have been found in or on Douglas fir in the northern Rocky Mountain region by personnel of the Forest Insect Field Laboratory at Coeur d'Alene, Idaho. It comprises insects which feed upon the tree, as well as the parasites and associates of these insects. Of the 153 species listed, 102 were collected by the writer while making a study of the Douglas fir beetle (Dendroctonus pseudotsugae Hopk.). The remainder are listed in the laboratory records and were collected by J. C. Evenden, R. E. Balch, H. J. Rust, and D. DeLeon.


2021 ◽  
Vol 7 (4) ◽  
pp. 265
Author(s):  
Junko Sugano ◽  
Ndegwa Maina ◽  
Janne Wallenius ◽  
Kristiina Hildén

Wood decomposition is a sophisticated process where various biocatalysts act simultaneously and synergistically on biopolymers to efficiently break down plant cell walls. In nature, this process depends on the activities of the wood-inhabiting fungal communities that co-exist and interact during wood decay. Wood-decaying fungal species have traditionally been classified as white-rot and brown-rot fungi, which differ in their decay mechanism and enzyme repertoire. To mimic the species interaction during wood decomposition, we have cultivated the white-rot fungus, Bjerkandera adusta, and two brown-rot fungi, Gloeophyllum sepiarium and Antrodia sinuosa, in single and co-cultivations on softwood and hardwood. We compared their extracellular hydrolytic carbohydrate-active and oxidative lignin-degrading enzyme activities and production profiles. The interaction of white-rot and brown-rot species showed enhanced (hemi)cellulase activities on birch and spruce-supplemented cultivations. Based on the enzyme activity profiles, the combination of B. adusta and G. sepiarium facilitated birch wood degradation, whereas B. adusta and A. sinuosa is a promising combination for efficient degradation of spruce wood, showing synergy in β-glucosidase (BGL) and α-galactosidase (AGL) activity. Synergistic BGL and AGL activity was also detected on birch during the interaction of brown-rot species. Our findings indicate that fungal interaction on different woody substrates have an impact on both simultaneous and sequential biocatalytic activities.


2020 ◽  
Vol 46 (3) ◽  
pp. 137-148
Author(s):  
Shoko HORIKAWA ◽  
Risako KONDO ◽  
Kiwamu UMEZAWA ◽  
Naori SASAKI ◽  
Rumi KONUMA ◽  
...  

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