Structure and resilience of fungal communities in Alaskan boreal forest soilsThis article is one of a selection of papers from The Dynamics of Change in Alaska’s Boreal Forests: Resilience and Vulnerability in Response to Climate Warming.

2010 ◽  
Vol 40 (7) ◽  
pp. 1288-1301 ◽  
Author(s):  
D. Lee Taylor ◽  
Ian C. Herriott ◽  
Kelsie E. Stone ◽  
Jack W. McFarland ◽  
Michael G. Booth ◽  
...  
Keyword(s):  
Mycorrhizal Fungi ◽  
Picea Glauca ◽  
Boreal Forests ◽  
Black Spruce ◽  
Cellulose Degradation ◽  
Niche Partitioning ◽  
Environmental Parameters ◽  
Fungal Species ◽  
Fungal Communities ◽  
Soil Horizon

This paper outlines molecular analyses of soil fungi within the Bonanza Creek Long Term Ecological Research program. We examined community structure in three studies in mixed upland, black spruce ( Picea mariana (Mill.) BSP), and white spruce ( Picea glauca (Moench) Voss) forests and examined taxa involved in cellulose degradation at one upland site. We found that soil horizon was the factor by which fungal communities were most strongly structured and that predictable turnover in upland fungal species occurred through succession. Communities from consecutive summers were not significantly different, indicating that interannual variation was small in relation to differences between forest types and soil horizons, yet the community at a seasonal study site underwent significant changes within a year. In each study, mycorrhizal fungi dominated the community. Fungi rather than bacteria appeared to dominate [13C]cellulose degradation, with strongest growth in taxa that were not dominant members of the untreated community, including members of the genus Sebacina . Overall, our results point to considerable interannual resilience juxtaposed with narrow niche partitioning and the capacity of individual taxa in these hyperdiverse communities to respond strongly to resource inputs and changes in other abiotic environmental parameters such as temperature. Our data double the cumulative total of fungal sequences in GenBank and together achieve a better picture of fungal communities here than for any other ecosystem on earth at this time.

scholarly journals Fungal Community Analysis and Biodeterioration of Waterlogged Wooden Lacquerware from the Nanhai No. 1 Shipwreck

2020 ◽  
Vol 10 (11) ◽  
pp. 3797
Author(s):  
Yin Jia ◽  
Liuyu Yin ◽  
Fengyu Zhang ◽  
Mei Wang ◽  
Mingliang Sun ◽  
...  
Keyword(s):  
Fusarium Solani ◽  
High Throughput Sequencing ◽  
Environmental Parameters ◽  
Community Analysis ◽  
Fungal Species ◽  
Potato Dextrose Agar ◽  
Fungal Communities ◽  
Cellulolytic Enzymes ◽  
Biocidal Products

To avoid the lacquerware of the Nanhai No. 1 shipwreck from being corroded by microorganisms and to improve the knowledge on microbial ecology of the wood lacquers, we conducted a series of tests on the two water samples storing the lacquerware and colonies on the surface of the lacquerware. The high-throughput sequencing detected dominant fungal communities. After that, the fungal strains were isolated and then identified by amplification of ITS- 18S rRNA. Then the activity of ligninolytic and cellulolytic enzymes was detected on potato dextrose agar (PDA) plates with 0.04% (v/v) guaiacol and carboxymethyl cellulose (CMC) agar plates. Finally, we tested the biocide susceptibility of these fungi. Penicillium chrysogenum (NK-NH3) and Fusarium solani (NK- NH1) were the dominant fungi in the sample collected in April 2016 and June 2017. What is more, both showed activity of ligninolytic and cellulolytic enzymes. Four biocidal products (Preventol® D7, P91, BIT 20N, and Euxyl® K100) inhibited the growth of the fungal species in vitro effectively. In further research, the microbial community and environmental parameters in the museum should be monitored to assess the changes in the community and to detect potential microbial outbreaks.

Effect of chronic ammonium nitrate addition on the ectomycorrhizal community in a black spruce stand1This article is one of a selection of papers from the 7th International Conference on Disturbance Dynamics in Boreal Forests.

2012 ◽  
Vol 42 (7) ◽  
pp. 1204-1212 ◽  
Author(s):  
Sergio Rossi ◽  
Adam Bordeleau ◽  
Daniel Houle ◽  
Hubert Morin
Keyword(s):  
Ammonium Nitrate ◽  
Boreal Forests ◽  
Black Spruce ◽  
N Deposition ◽  
Fungal Species ◽  
Root Tip ◽  
Soil Conditions ◽  
Root Tips ◽  
Atmospheric N Deposition ◽  
Host Trees

Observed modifications of ectomycorrhizal (ECM) communities have been connected to the increased N depositions of the 20th century. Because of their narrow niche width, small disturbances of soil conditions can produce greater effects on the fungal species than on their host trees. This study investigated the ECM community in a black spruce ( Picea mariana (Mill.) BSP) stand subjected to long-term additions of 9 and 30 kg N·ha–1·year–1 of ammonium nitrate, representing 3 and 10 times the atmospheric N deposition at the site, respectively. Root tip vitality and ECM presence were detected on samples collected from the organic horizon and ECM were classified into morphotypes according to their morphological and anatomical characters. In the control, 80.6% of the root tips were vital, 76.5% of them showing ECM colonization. Higher root tip vitality and mycorrhization were observed in the treated plots. Forty-one morphotypes were identified, most of them detected at the higher N inputs. Results diverging from the expectations of a reduction in ECM presence and diversity could be related to a higher growth rate of the trees following fertilization. The repeated application of small N doses could have been a better imitation of natural inputs from atmospheric deposition and could have provided more reliable responses of ECM to treatment.

scholarly journals Xylogenesis in black spruce subjected to rain exclusion in the field1This article is one of a selection of papers from the 7th International Conference on Disturbance Dynamics in Boreal Forests.

2012 ◽  
Vol 42 (7) ◽  
pp. 1306-1315 ◽  
Author(s):  
Evelyn Belien ◽  
Sergio Rossi ◽  
Hubert Morin ◽  
Annie Deslauriers
Keyword(s):  
Boreal Forest ◽  
Boreal Forests ◽  
Black Spruce ◽  
Water Status ◽  
Soil Horizon ◽  
Summer Drought ◽  
Normal Water ◽  
Short Time ◽  
And Control ◽  
Selection Of

The predicted climate warming and more frequent and longer droughts are expected to produce potentially severe water stresses in the boreal forest. The aim of this experiment was to study the effect of a summer drought on xylem phenology and anatomy of mature black spruce ( Picea mariana (Mill.) BSP) trees in their natural environment. The trees were excluded from rain during June–September 2010 by the installation of under-canopy roofs in four sites of the boreal forest of Quebec. Xylem phenology, stem radius variations, and physiological traits of treated and control trees were monitored at short time resolution. At the end of the growth season, cell characteristics were measured. The rain exclusion reduced the cell area of the xylem, but no significant change was observed in cell wall thickness, cell production, or phenology. Stem radius variations of the treated trees were lower but followed the same pattern as the control. After removal of the exclusion, trees and soil quickly recovered their normal water status. One summer of drought led to the formation of smaller tracheids but showed that black spruce is resistant to this rain exclusion treatment. This is likely due to the ability to collect water from sources other than the superficial soil horizon.

CO2 stimulation and response mechanisms vary with light supply in boreal conifers

2020 ◽  
Author(s):  
Qing-Lai Dang ◽  
Jacob Marfo ◽  
Fengguo Du ◽  
Rongzhou Man ◽  
Sahari Inoue
Keyword(s):  
Elevated Co2 ◽  
Picea Glauca ◽  
Boreal Forests ◽  
Black Spruce ◽  
Net Photosynthesis ◽  
Growing Season ◽  
White Spruce ◽  
Light Supply ◽  
Ecophysiological Responses ◽  
Light Effects

Abstract Aims Black spruce (Picea mariana [Mill.] B.S.P.) and white spruce (Picea glauca [Moench] Voss.) are congeneric species. Both are moderately shade tolerant and widely distributed across North American boreal forests. Methods To understand light effects on their ecophysiological responses to elevated [CO2], 1-year old seedlings were exposed to 360 and 720 µmol mol -1 [CO2] at three light conditions (100, 50 and 30% of full light in the greenhouse). Foliar gas exchanges were measured in the mid- and late-growing season. Important Findings Elevated [CO2] increased net photosynthesis (Pn) and photosynthetic water use efficiency, but it reduced stomatal conductance and transpiration. The stimulation of photosynthesis by CO2 was greatest at 50% light and smallest at 100%. Photosynthesis, maximum carboxylation rate (Vcmax) and light saturated rate of electron transport (Jmax) all decreased with decreasing light. Elevated [CO2] significantly reduced Vcmax across all light treatments and both species in mid-growing season. However, the effect of elevated [CO2] became insignificant at 30% light later in the growing season, with the response being greater in black spruce than in white spruce. Elevated [CO2] also reduced Jmax in white spruce in both measurements while the effect became insignificant at 30% light later in the growing season. However, the effect on black spruce varied with time. Elevated [CO2] reduced Jmax in black spruce in mid-growing season in all light treatments and the effect became insignificant at 30% light later in the growing season, while it increased Jmax later in the season at 100% and 50% light. These results suggest that both species benefited from elevated CO2, and that the responses varied with light supply, such that the response was primarily physiological at 100% and 50% light, while it was primarily morphological at 30% light.

scholarly journals Forest tree species composition and abiotic site conditions drive soil fungal communities and functional groups

2021 ◽  
Author(s):  
Likulunga Emmanuel Likulunga ◽  
Carmen Alicia Rivera P&eacuterez ◽  
Dominik Schneider ◽  
Rolf Daniel ◽  
Andrea Polle
Keyword(s):  
Species Richness ◽  
Tree Species ◽  
Mycorrhizal Fungi ◽  
Fungal Diversity ◽  
Fungal Species ◽  
Douglas Fir ◽  
Fungal Communities ◽  
Site Conditions ◽  
Saprotrophic Fungi ◽  
Tree Species Composition

Soil fungi, especially the functional guilds of saprotrophic and mycorrhizal fungi, play a central role in ecosystem processes by degrading litter, mining for mineral nutrients and linking above- and belowground nutrient fluxes. Fungal community structures are influenced by abiotic habitat filters and management decisions such as tree species selection. Yet, the implications of the enrichment of temperate forests consisting of tree species in their natural range with non-native tree species on soil fungal diversity and their functional groups are unknown. Here, we studied fungal communities in 40 plots located in two regions differing in site conditions (nutrient content and soil moisture) in forests composed of European beech, Norway spruce and Douglas-fir (non-native) and mixtures of beech with either spruce or Douglas-fir. We hypothesized that fungal community structures are driven by soil resources and tree species composition, generally resulting in higher fungal diversity in mixed than in mono-specific forests. We further hypothesized that Douglas-fir has a negative effect on ectomycorrhizal fungal species richness compared to native species, whereas saprotrophic fungal richness is unaffected. We found strong separation of fungal communities between nutrient-rich and nutrient-poor sites and taxonomic divergence between beech and conifer fungal communities and an intermediate pattern in mixed forests. Mycorrhizal species richness did not vary with forest type, but the relative abundance of mycorrhizal species was lower in Douglas-fir and in mixed beech-Douglas-fir forests than in spruce or beech-spruce mixture. Conifer forests contained higher relative abundances of saprotrophic fungi than mono-specific beech forests. Among 16 abundant fungal orders in soil, two containing saprotrophic fungi (Tremellales, Hymenochaetales) were enriched in conifer forests, regardless of site conditions and tree species mixture. The other fungal orders, including those dominated by mycorrhizal fungi (Russulales, Boletales, Atheliales, Cantharellales) showed variable patterns depending on site conditions and tree species. In conclusion, Douglas-fir mono-specific or mixed forests show no loss of fungal species richness, but a shift in functional composition towards saprotrophic fungi.

scholarly journals Variation in Soil Fungal Composition Associated with the Invasion of Stellera chamaejasme L. in Qinghai–Tibet Plateau Grassland

2019 ◽  
Vol 7 (12) ◽  
pp. 587 ◽  
Author(s):  
Wei He ◽  
Andrew Detheridge ◽  
Yongmei Liu ◽  
Lei Wang ◽  
Haochen Wei ◽  
...  
Keyword(s):  
Organic Matter ◽  
Mycorrhizal Fungi ◽  
Alpha Diversity ◽  
Pathogenic Fungi ◽  
Fungal Species ◽  
Fungal Communities ◽  
Tibet Plateau ◽  
Fungal Community Composition ◽  
Functional Variation ◽  
Stellera Chamaejasme

Stellera chamaejasme L. is the most problematic weed in China’s grasslands. Its root exudates affect co-occurring plants and thus may also affect soil fungi. Soils (0–20 cm depth) on two adjacent sites, one invaded the other uninvaded, were compared for a range of physiochemical parameters and by DNA sequencing of fungal communities. At the invaded site, relationships between S. chamaejasme abundance, soil physiochemical factors, and fungal communities were further investigated to determine whether these relationships corroborated conclusions on the basis of site differences that could be translated into functional variation. Results showed that the invaded soils had lower N, P, organic matter, fungal alpha diversity, and relative abundance of arbuscular mycorrhizal fungi (AMF), but greater abundance of pathogenic fungi. Organic matter and P were the edaphic factors most strongly linked to site differences in total fungal communities. Within the invaded site, organic matter rather than S. chamaejasme cover was closely linked to total fungal composition. However, on this site, a number of fungal species that had various ecological functions and that differentiated the two sites were related to S. chamaejasme cover. This study indicates that lower fertility soils may be more susceptible to invasion by S. chamaejasme. Although the influence of S. chamaejasme on total fungal community composition was limited, there was evidence of effects on particular fungal species. Further research is needed to determine whether these effects influence S. chamaejasme invasiveness.

scholarly journals Mycorrhizal fungi supply nitrogen to host plants in Arctic tundra and boreal forests: 15N is the key signalThis article is one of a selection of papers in the Special Issue on Polar and Arctic Microbiology.

2009 ◽  
Vol 55 (1) ◽  
pp. 84-94 ◽  
Author(s):  
John E. Hobbie ◽  
Erik A. Hobbie ◽  
Howard Drossman ◽  
Maureen Conte ◽  
J. C. Weber ◽  
...  
Keyword(s):  
Boreal Forest ◽  
Mycorrhizal Fungi ◽  
Picea Glauca ◽  
Boreal Forests ◽  
Host Plants ◽  
Light Availability ◽  
N Availability ◽  
N Content ◽  
The North ◽  
North Slope Of Alaska

Symbiotic fungi’s role in providing nitrogen to host plants is well-studied in tundra at Toolik Lake, Alaska, but little-studied in the adjoining boreal forest ecosystem. Along a 570 km north–south transect from the Yukon River to the North Slope of Alaska, the 15N content was strongly reduced in ectomycorrhizal and ericoid mycorrhizal plants including Betula , Salix , Picea mariana (P. Mill.) B.S.P., Picea glauca Moench (Voss), and ericaceous plants. Compared with the 15N content of soil, the foliage of nonmycorrhizal plants ( Carex and Eriophorum ) was unchanged, whereas content of the ectomycorrhizal fungi was very much higher (e.g., Boletaceae, Leccinum and Cortinarius ). It is hypothesized that similar processes operate in tundra and boreal forest, both nitrogen-limited ecosystems: (i) mycorrhizal fungi break down soil polymers and take up amino acids or other nitrogen compounds; (ii) mycorrhizal fungi fractionate against 15N during production of transfer compounds; (iii) host plants are accordingly depleted in 15N; and (iv) mycorrhizal fungi are enriched in 15N. Increased N availability for plant roots or decreased light availability to understory plants may have decreased N allocation to mycorrhizal partners and increased δ15N by 3‰–4‰ for southern populations of Vaccinium vitis-idaea L. and Salix. Fungal biomass, measured as ergosterol, correlated strongly with soil organic matter and attained amounts similar to those in temperate forest soils.

Pathogenicity of wild-type and albino strains of the fungus Ceratocystis resinifera, a potential biocontrol agent against bluestain

2007 ◽  
Vol 37 (5) ◽  
pp. 919-930 ◽  
Author(s):  
Chantal Morin ◽  
Solajo Couturier ◽  
Louis Bernier
Keyword(s):  
Picea Glauca ◽  
Large Scale ◽  
Biocontrol Agent ◽  
Black Spruce ◽  
Field Trials ◽  
Fungal Species ◽  
Wild Type ◽  
Low Oxygen ◽  
Pathogenic Potential ◽  
Potential Biocontrol Agent

To verify the environmental innocuousness of large-scale applications of an albino strain (Kasper) of Ceratocystis resinifera Harrington & Wingfield, a potential biocontrol agent against bluestain, we tested the pathogenicity of this fungal species in greenhouse and field trials. In the greenhouse, the development of C. resinifera was negligible in deciduous seedlings, whereas the fungus was able to colonize the three conifer species tested. Ceratocystis resinifera induced only small lesions in white pine ( Pinus strobus L.) but colonized more extensively white spruce ( Picea glauca (Moench) Voss) and black spruce ( Picea mariana (Mill.) BSP) seedlings. Black spruce was the most affected species and showed the highest mean mortality rate (40%). However, the pathogenicity of C. resinifera seemed to be conditional, since no mortality was observed in one experiment. In the field trial, C. resinifera induced longer lesions than Ophiostoma piceae (Münch) Syd. & P. Syd. 1919 (a weak pathogen) as well as mortality in one mature black spruce tree. However, Kasper was less virulent than the wild type isolate tested, since it induced significantly smaller lesions and no mortality. In spite of its ability to colonize spruce trees, C. resinifera showed a weak tolerance to low oxygen levels, which, together with the lack of a primary bark beetle vector associate, may reduce its pathogenic potential.

scholarly journals How Tillage and Crop Rotation Change the Distribution Pattern of Fungi

2021 ◽  
Vol 12 ◽  
Author(s):  
Luigi Orrù ◽  
Loredana Canfora ◽  
Alessandra Trinchera ◽  
Melania Migliore ◽  
Bruno Pennelli ◽  
...  
Keyword(s):  
Crop Rotation ◽  
Climatic Factors ◽  
Mutual Exclusion ◽  
Niche Partitioning ◽  
Inverse Correlation ◽  
Fungal Species ◽  
Fungal Communities ◽  
Small Scale ◽  
Plant Residues ◽  
Saprotrophic Fungi

Massive sequencing of fungal communities showed that climatic factors, followed by edaphic and spatial variables, are feasible predictors of fungal richness and community composition. This study, based on a long-term field experiment with tillage and no-tillage management since 1995 and with a crop rotation introduced in 2009, confirmed that tillage practices shape soil properties and impact soil fungal communities. Results highlighted higher biodiversity of saprotrophic fungi in soil sites with low disturbance and an inverse correlation between the biodiversity of ectomycorrhizal and saprotrophic fungi. We speculated how their mutual exclusion could be due to a substrate-mediated niche partitioning or by space segregation. Moreover, where the soil was ploughed, the species were evenly distributed. There was higher spatial variability in the absence of ploughing, with fungal taxa distributed according to a small-scale pattern, corresponding to micro-niches that probably remained undisturbed and heterogeneously distributed. Many differentially represented OTUs in all the conditions investigated were unidentified species or OTUs matching at high taxa level (i.e., phylum, class, order). Among the fungi with key roles in all the investigated conditions, there were several yeast species known to have pronounced endemism in soil and are also largely unidentified. In addition to yeasts, other fungal species emerged as either indicator of a kind of management or as strongly associated with a specific condition. Plant residues played a substantial role in defining the assortment of species.

Temporal dynamics of mycorrhizal fungal communities and co-associations with grassland plant communities following experimental manipulation of rainfall

2019 ◽  
Author(s):  
Coline Deveautour ◽  
Sally Power ◽  
Kirk Barnett ◽  
Raul Ochoa-Hueso ◽  
Suzanne Donn ◽  
...  
Keyword(s):  
Community Composition ◽  
Plant Community ◽  
Plant Communities ◽  
Fungal Community ◽  
Mycorrhizal Fungi ◽  
Temporal Dynamics ◽  
Arbuscular Mycorrhizal ◽  
Fungal Communities ◽  
Plant Responses ◽  
Rainfall Regimes

Climate models project overall a reduction in rainfall amounts and shifts in the timing of rainfall events in mid-latitudes and sub-tropical dry regions, which threatens the productivity and diversity of grasslands. Arbuscular mycorrhizal fungi may help plants to cope with expected changes but may also be impacted by changing rainfall, either via the direct effects of low soil moisture on survival and function or indirectly via changes in the plant community. In an Australian mesic grassland (former pasture) system, we characterised plant and arbuscular mycorrhizal (AM) fungal communities every six months for nearly four years to two altered rainfall regimes: i) ambient, ii) rainfall reduced by 50% relative to ambient over the entire year and iii) total summer rainfall exclusion. Using Illumina sequencing, we assessed the response of AM fungal communities sampled from contrasting rainfall treatments and evaluated whether variation in AM fungal communities was associated with variation in plant community richness and composition. We found that rainfall reduction influenced the fungal communities, with the nature of the response depending on the type of manipulation, but that consistent results were only observed after more than two years of rainfall manipulation. We observed significant co-associations between plant and AM fungal communities on multiple dates. Predictive co-correspondence analyses indicated more support for the hypothesis that fungal community composition influenced plant community composition than vice versa. However, we found no evidence that altered rainfall regimes were leading to distinct co-associations between plants and AM fungi. Overall, our results provide evidence that grassland plant communities are intricately tied to variation in AM fungal communities. However, in this system, plant responses to climate change may not be directly related to impacts of altered rainfall regimes on AM fungal communities. Our study shows that AM fungal communities respond to changes in rainfall but that this effect was not immediate. The AM fungal community may influence the composition of the plant community. However, our results suggest that plant responses to altered rainfall regimes at our site may not be resulting via changes in the AM fungal communities.

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