Cell division in a species of Erwinia. XI Some aspects of the carbon and nitrogen nutrition of Erwinia species

1968 ◽  
Vol 14 (11) ◽  
pp. 1217-1224 ◽  
Author(s):  
Mary M. Grula ◽  
R. W. Smith ◽  
C. F. Parham ◽  
E. A. Grula
Keyword(s):  
Cell Division ◽  
Carbon Source ◽  
Aspartic Acid ◽  
Ammonium Chloride ◽  
Sole Carbon Source ◽  
Nitrogen Nutrition ◽  
Krebs Cycle ◽  
Sole Source ◽  
Mineral Salts ◽  
Acid Media

The species of Erwinia used in cell division studies (Grula 1960a) will grow on L- or D-aspartic acid, but no other amino acid, as a sole source of carbon, nitrogen, and energy. Ammonia is utilizable as a sole source of nitrogen; in this case the rate and extent of growth are significantly influenced by the carbon source. Of all compounds tested, malic acid supports the most rapid and abundant growth in an ammonium chloride – mineral salts medium. Added pantothenate often stimulates growth in ammonium chloride media, but not in aspartic acid media. Growth in an ammonium chloride – glucose – salts medium is rather slow and limited. Marked stimulation occurs by supplementation with intermediates of the Krebs cycle, even though the compound supports little or no growth as a sole carbon source. Neither L-glutamic acid nor α-ketoglutaric acid supports growth as a sole carbon source; this is believed to result from impermeability of the cell to these compounds.

scholarly journals Sugarcane bagasse as a source of carbon for enzyme production by filamentous fungi1

Hoehnea ◽  
2018 ◽  
Vol 45 (1) ◽  
pp. 134-142 ◽  
Author(s):  
Flaviane Lopes Ferreira ◽  
Cesar Barretta Dall'Antonia ◽  
Emerson Andrade Shiga ◽  
Larissa Juliani Alvim ◽  
Rosemeire Aparecida Bom Pessoni
Keyword(s):  
Carbon Source ◽  
Enzymatic Activity ◽  
Sugarcane Bagasse ◽  
Enzyme Production ◽  
Sole Carbon Source ◽  
Sole Source ◽  
Maximum Activity ◽  
Liquid Media ◽  
Biotechnological Potential ◽  
Efficient Producer

ABSTRACT The aim of the present work was to assess the enzymatic activity of six strains of filamentous fungi grown in liquid media containing 1% sugarcane bagasse as the sole carbon source. All fungal strains were able to use this agro-industrial residue, producing various types of enzymes, such as cellulases, xylanases, amylases, pectinases, and laccases. However, Aspergillus japonicus Saito was the most efficient producer, showing the highest enzymatic activity for laccase (395.73 U L-1), endo-β-1,4-xylanase (3.55 U mL-1) and β-xylosidase (9.74 U mL-1) at seven, fourteen and twenty-one days in culture, respectively. Furthermore, the endo-β-1,4-xylanases and β-xylosidases of A. japonicus showed maximum activity at 50°C, and pH 5.5 and pH 3.5-4.5, respectively. Thus, these results indicate that A. japonicus has a great biotechnological potential for the production of these enzymes using sugarcane bagasse as the sole source of carbon.

Selective medium for the isolation and enumeration of Mycobacterium avium-intracellulare and M. scrofulaceum

1986 ◽  
Vol 32 (1) ◽  
pp. 10-14 ◽  
Author(s):  
Karen L. George ◽  
Joseph O. Falkinham III
Keyword(s):  
Carbon Source ◽  
Mycobacterium Avium ◽  
Sole Carbon Source ◽  
Natural Waters ◽  
Tween 80 ◽  
Selective Medium ◽  
Selective Isolation ◽  
Mineral Salts ◽  
Mycobacterium Avium Intracellulare

A medium for the selective isolation and enumeration of Mycobacterium avium-intracellulare and M. scrofulaceum (MAIS) was developed, based upon the ability of these mycobacteria to utilize Tween 80 as sole carbon source and grow optimally at pH 5.5 on a simple mineral salts medium. Representative MAIS strains had higher efficiencies of plating on the Tween 80 medium compared with Middlebrook 7H10. It was shown that nonmycobacterial organisms in natural waters had lower efficiencies of plating on the Tween 80 medium and smaller colonies, thus allowing direct isolation and enumeration of the slowly growing mycobacteria without overgrowth.

scholarly journals Coupling among growth rate response, metabolic cycle, and cell division cycle in yeast

2011 ◽  
Vol 22 (12) ◽  
pp. 1997-2009 ◽  
Author(s):  
Nikolai Slavov ◽  
David Botstein
Keyword(s):  
Growth Rate ◽  
Oxygen Consumption ◽  
Cell Division ◽  
Carbon Source ◽  
Oxidative Metabolism ◽  
Sole Source ◽  
Cell Division Cycle ◽  
Steady State Responses ◽  
Yeast Metabolic Cycle ◽  
Metabolic Cycle

We studied the steady-state responses to changes in growth rate of yeast when ethanol is the sole source of carbon and energy. Analysis of these data, together with data from studies where glucose was the carbon source, allowed us to distinguish a “universal” growth rate response (GRR) common to all media studied from a GRR specific to the carbon source. Genes with positive universal GRR include ribosomal, translation, and mitochondrial genes, and those with negative GRR include autophagy, vacuolar, and stress response genes. The carbon source–specific GRR genes control mitochondrial function, peroxisomes, and synthesis of vitamins and cofactors, suggesting this response may reflect the intensity of oxidative metabolism. All genes with universal GRR, which comprise 25% of the genome, are expressed periodically in the yeast metabolic cycle (YMC). We propose that the universal GRR may be accounted for by changes in the relative durations of the YMC phases. This idea is supported by oxygen consumption data from metabolically synchronized cultures with doubling times ranging from 5 to 14 h. We found that the high oxygen consumption phase of the YMC can coincide exactly with the S phase of the cell division cycle, suggesting that oxidative metabolism and DNA replication are not incompatible.

Enzymatic and 14C-mannitol studies of the Aspergillus mannitol metabolism

1970 ◽  
Vol 16 (5) ◽  
pp. 363-367 ◽  
Author(s):  
Wei Hwa Lee
Keyword(s):  
Glucose Metabolism ◽  
Carbon Source ◽  
Metabolic Rate ◽  
Sole Carbon Source ◽  
Glucose Oxidation ◽  
Sole Source ◽  
Aspergillus Species ◽  
Mannitol Metabolism

Aspergillus species (UC4177) accumulated mannitol from glucose substrate and it also used mannitol as the sole carbon source. Experiment with radioactive mannitol showed that the accumulation of mannitol and the oxidation of mannitol to CO2 proceeded simultaneously. The presence of glucose in the medium did not inhibit mannitol oxidation. Mannitol was oxidized at about 25% of the metabolic rate of glucose. The rate of mannitol oxidation and several of the enzymes directly involved in mannitol metabolism were unaffected by using glucose or mannitol as the sole source of carbon. Nine enzymes of glucose metabolism were tested and none appeared to limit the rate of glucose oxidation. Aspergillus phosphofructokinase was not inhibited by 2.4 mM ATP or 10 mM citrate. Possible enzymatic defects favoring mannitol accumulation were not found.

THE UTILIZATION OF PURINES, PYRIMIDINES, AND INORGANIC NITROGENOUS COMPOUNDS BY EFFECTIVE AND INEFFECTIVE STRAINS OF RHIZOBIUM MELILOTI

1955 ◽  
Vol 1 (8) ◽  
pp. 668-674 ◽  
Author(s):  
D. C. Jordan ◽  
C. L. San Clemente
Keyword(s):  
Amino Acids ◽  
Carboxylic Acids ◽  
Ammonium Chloride ◽  
Rhizobium Meliloti ◽  
Synthetic Medium ◽  
Nitrogen Sources ◽  
Sole Source ◽  
Acid Media ◽  
Nitrogenous Compounds ◽  
Growth Initiation

Ammonium chloride was not utilized by three strains of Rhizobium meliloti as the sole source of nitrogen in a sucrose medium, unless either amino or certain non-nitrogenous carboxylic acids were also present. This was also essentially true for the utilization of nitrate, nitrite, purines, and pyrimidines, all of which are potentially able to form ammonia. These results may be interpreted on the assumption that washed cells of alfalfa – sweet clover rhizobia require, for growth initiation in a nitrogen-free medium, either preformed amino acids or compounds such as ammonia and certain carboxylic acids from which amino acids can be synthesized. Since α-ketoglutarate was extremely active in promoting growth in a medium containing ammonium chloride it was implied that the ammonia may be fixed by L-glutamic acid dehydrogenase activity, especially since this particular enzyme was located in these organisms. No aspartase activity could be demonstrated. The ineffective strain differed from the effective strains in that it was unable to use purines or pyrimidines as accessory nitrogen sources in amino acid media. This was a result of strain variation and it was not coupled with the state of ineffectiveness itself. A synthetic medium has been formulated for further growth studies on washed Rhizobium cells and for investigations on auxotrophic mutants of these bacteria.

DECOMPOSITION OF 2,2-DICHLOROPROPIONIC ACID BY SOIL BACTERIA

1959 ◽  
Vol 5 (3) ◽  
pp. 255-260 ◽  
Author(s):  
Lyman A. Magee ◽  
Arthur R. Colmer
Keyword(s):  
Carbon Source ◽  
Liquid Medium ◽  
Soil Bacteria ◽  
Sole Carbon Source ◽  
Solid Medium ◽  
Chloride Ion ◽  
Inhibitory Effect ◽  
Mineral Salts ◽  
Selective Media ◽  
Enrichment Techniques

Eight bacteria capable of decomposing 2,2-dichloropropionate (dalapon) were isolated from soil by means of enrichment techniques and selective media. The decomposition was demonstrated by the clearing of a solid medium containing mineral salts, dalapon, and CaCO3; by a lowering of the pH of a liquid medium containing dalapon as the carbon source; by the increase in chloride ion in the liquid medium; and by the consumption of oxygen by three of the isolates when dalapon was the sole carbon source. Six of these were tentatively classified as Agrobacterium and two were tentatively classified as Pseudomonas, although there was much overlapping of characteristics. These organisms and many unidentified actinomycetes, molds, and bacteria, including a Micrococcus species, overcame the inhibitory effect of dalapon on an agar-decomposing bacterium when grown on the same plate.

scholarly journals Biodegradation of Bis(2-Chloroethyl) Ether by Xanthobacter sp. Strain ENV481

2007 ◽  
Vol 73 (21) ◽  
pp. 6870-6875 ◽  
Author(s):  
Kevin McClay ◽  
Charles E. Schaefer ◽  
Simon Vainberg ◽  
Robert J. Steffan
Keyword(s):  
United States ◽  
Carbon Source ◽  
Diethylene Glycol ◽  
Sole Carbon Source ◽  
Bacterial Isolate ◽  
Chloroacetic Acid ◽  
Sole Source ◽  
Superfund Site ◽  
Bacterial Strains ◽  
Northeastern United States

ABSTRACT Degradation of bis(2-chloroethyl) ether (BCEE) was observed to occur in two bacterial strains. Strain ENV481, a Xanthobacter sp. strain, was isolated by enrichment culturing of samples from a Superfund site located in the northeastern United States. The strain was able to grow on BCEE or 2-chloroethylethyl ether as the sole source of carbon and energy. BCEE degradation in strain ENV481 was facilitated by sequential dehalogenation reactions resulting in the formation of 2-(2-chloroethoxy)ethanol and diethylene glycol (DEG), respectively. 2-Hydroxyethoxyacetic acid was detected as a product of DEG catabolism by the strain. Degradation of BCEE by strain ENV481 was independent of oxygen, and the strain was not able to grow on a mixture of benzene, ethylbenzene, toluene, and xylenes, other prevalent contaminants at the site. Another bacterial isolate, Pseudonocardia sp. strain ENV478 (S. Vainberg et al., Appl. Environ. Microbiol. 72:5218-5224, 2006), degraded BCEE after growth on tetrahydrofuran or propane but was not able to grow on BCEE as a sole carbon source. BCEE degradation by strain ENV478 appeared to be facilitated by a monooxygenase-mediated O-dealkylation mechanism, and it resulted in the accumulation of 2-chloroacetic acid that was not readily degraded by the strain.

Isolation and Mutagenesis of a Novel Phenol-Degrading Strain

2013 ◽  
Vol 647 ◽  
pp. 588-594 ◽  
Author(s):  
Ren Peng ◽  
Gui Juan Yang ◽  
Qi Ming Wang ◽  
Yun Yun Du ◽  
Jia Rong Li
Keyword(s):  
Carbon Source ◽  
16S Rdna ◽  
Sole Carbon Source ◽  
Sole Source ◽  
Morphological Features ◽  
Rhodococcus Ruber ◽  
16S Rdna Sequence ◽  
Rotting Wood ◽  
Optimum Ph ◽  
Optimum Ph And Temperature

In this study, with phenol as sole source of carbon, a phenol-degrading strain was isolated from rotting wood and polluted sludge. The strain was identified as Rhodococcus ruber SD3 according to their morphological features and 16S rDNA sequence. Rhodococcus ruber SD3 almost completely degraded 1.0g L-1 phenol in 72 hours. Rhodococcus ruber SD3 was also capable of growing in a medium containing isooctane, cyclohexane, benzene, n-heptane, toluene, acetonitrile, chlorobenzene, naphthalene, n-hexane, 1-naphthol and dimethylbenzene as sole carbon source, respectively. Rhodococcus ruber SD3 was mutated using LiCl as a chemical mutagen. The optimal concentration of LiCl for mutagenesis was 0.3 %. The mutant M1 could degrade 99.8 % of 1.5 g L-1 phenol within 72h. The optimum pH and temperature for the degradation of phenol with mutant M1 were 7.5 and 35°C.

scholarly journals Biodegradation of malathion by Bacillus licheniformis strain ML-1

2016 ◽  
Vol 68 (1) ◽  
pp. 51-59 ◽  
Author(s):  
Sara Khan ◽  
Habiba Zaffar ◽  
Usman Irshad ◽  
Raza Ahmad ◽  
Abdul Khan ◽  
...  
Keyword(s):  
Carbon Source ◽  
Bacillus Licheniformis ◽  
Sole Carbon Source ◽  
Sole Source ◽  
Minimal Salt Medium ◽  
Organophosphate Pesticide ◽  
Soil Enrichment ◽  
Enrichment Technique ◽  
Malathion Carboxylesterase

Malathion, a well-known organophosphate pesticide, has been used in agriculture over the last two decades for controlling pests of economically important crops. In the present study, a single bacterium, ML-1, was isolated by soil-enrichment technique and identified as Bacillus licheniformis on the basis of the 16S rRNA technique. The bacterium was grown in carbon-free minimal salt medium (MSM) and was found to be very efficient in utilizing malathion as the sole source of carbon. Biodegradation experiments were performed in MSM without carbon source to determine the malathion degradation by the selected strain, and the residues of malathion were determined quantitatively using HPLC techniques. Bacillus licheniformis showed very promising results and efficiently consumed malathion as the sole carbon source via malathion carboxylesterase (MCE), and about 78% malathion was degraded within 5 days. The carboxylesterase activity was determined by using crude extract while using malathion as substrate, and the residues were determined by HPLC. It has been found that the MCE hydrolyzed 87% malathion within 96 h of incubation. Characterization of crude MCE revealed that the enzyme is robust in nature in terms of organic solvents, as it was found to be stable in various concentrations of ethanol and acetonitrile. Similarly, and it can work in a wide pH and temperature range. The results of this study highlighted the potential of Bacillus licheniformis strain ML-1 as a biodegrader that can be used for the bioremediation of malathion-contaminated soil.

INTERRELATIONSHIPS BETWEEN THE TRICARBOXYLIC ACID AND GLYOXYLATE CYCLES STUDIED WITH BACTERIAL AUXOTROPHS

1962 ◽  
Vol 8 (2) ◽  
pp. 241-247 ◽  
Author(s):  
Henry C. Reeves ◽  
Samuel J. Ajl
Keyword(s):  
Carbon Source ◽  
Sole Carbon Source ◽  
Tricarboxylic Acid Cycle ◽  
Tricarboxylic Acid ◽  
Mineral Salts ◽  
Glyoxylate Bypass ◽  
Acid Cycle ◽  
E Coli ◽  
Acetate Medium ◽  
Metabolic Significance

An autotroph of Escherichia coli, E26-6, which is unable to grow aerobically in a simple mineral-salts medium with either acetate, glutamate, isocitrate, or any one of the C4 dicarboxylic acid intermediates of the tricarboxylic acid cycle as sole carbon source, has been investigated. The mutant is able to grow, however, in a mineral-salts acetate medium supplemented with any one of the above acids. The specific activities of the tricarboxylic acid cycle and glyoxylate bypass enzymes, with the exception of alpha-ketoglutaric dehydrogenase, which is greatly impaired in the auxotroph, were found to be essentially the same in both the parent and the mutant. Thus, the glyoxylate bypass alone is not capable of supplying sufficient C4 intermediates to allow the growth of E. coli on acetate. Further, there appear to be no other metabolic pathways leading to C4 production, which are of major metabolic significance during growth on acetate, other than the tricarboxylic and glyoxylate cycles. Finally, in conjunction with the tricarboxylic acid cycle, the malate synthetase and isocitritase reactions provide a mechanism which enables E. coli to grow on a medium containing acetate as the sole carbon source.

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