Absence of population structure in black flies as revealed by enzyme electrophoresis

Genome ◽  
1989 ◽  
Vol 32 (4) ◽  
pp. 531-537 ◽  
Author(s):  
R. M. Feraday ◽  
K. G. Leonhardt
Keyword(s):  
Population Structure ◽  
Allozyme Variation ◽  
Structure Evolution ◽  
Population Subdivision ◽  
Enzyme Electrophoresis ◽  
Black Flies ◽  
Chromosome Inversion ◽  
Black Fly ◽  
Shifting Balance ◽  
Simulium Decorum

Analysis of allozyme variation by the FST-statistic in Simulium decorum and several other black fly species reveals very little genetic variation that could be attributed to genetic drift. This is consistent with what is known about the rates of migration of black flies and supports the idea that there is a lack of population subdivision in these insects. This picture of population structure is quite different from that presented by chromosome inversion polymorphisms. Chromosomal variation, however, can reasonably be attributed to selection and suggests that the role of inversions in black fly evolution is similar to population subdivision in the shifting balance process.Key words: black flies, allozymes, population structure, evolution.

ECOLOGY OF BLACK FLIES (DIPTERA: SIMULIIDAE) OF THE SOURIS RIVER, MANITOBA AS A BASIS FOR CONTROL STRATEGY

1981 ◽  
Vol 113 (3) ◽  
pp. 223-234 ◽  
Author(s):  
A. R. Westwood ◽  
R. A. Brust
Keyword(s):  
Control Program ◽  
Abundant Species ◽  
Pest Species ◽  
Black Flies ◽  
Black Fly ◽  
Simulium Vittatum ◽  
Late Instar ◽  
Simulium Decorum ◽  
Fly Control ◽  
Wire Cage

AbstractTen species of black flies were collected from the Souris River, Manitoba between April 1977 and October 1978. Adults of Simulium luggeri Nicholson and Mickel, Simulium meridionale Riley, Simulium venustum Say, Simulium verecundum Stone and Jamnback, and Simulium johannseni johannseni (Hart) were collected feeding on livestock and humans, and are well known pest species. Simulium vittatum Zetterstedt was the most abundant species, but was not a pest on man or domestic animals. Simulium tuberosum (Lundström) and Simulium johannseni duplex Shewell and Fredeen were the least abundant species. Simulium j. johannseni, S. j. duplex, S. venustum, S. verecundum, S. tuberosum, and Cnephia dacotensis (Dyar and Shannon) appeared to be univoltine species while S. luggeri, S. meridionale, Simulium decorum Walker, and S. vittatum were multivoltine in the Souris River.An evaluation of cone, plate, rope, and wire cage sampling devices for black fly larvae and pupae indicated that cone samplers provided a more representative sample for population assessment.In a black fly control program, of the Souris River, Manitoba two separate larvicide treatments in spring may be necessary. In the case of two treatments, the first should be aimed at late instar larvae of S. j. johannseni, S. venustum, and S. verecundum. Since the majority of S. luggeri and S. meridionale would be in the egg stage at this time, a second treatment, 10–14 days later, would be necessary to control late instar larvae of these species.

scholarly journals Evaluation of Partially Submerged Sticky Traps On Lake Spillways For Adult Black Fly (Diptera: Simuliidae) Surveillance and Arbovirus Detection

2018 ◽  
Vol 34 (4) ◽  
pp. 306-310
Author(s):  
Michael C. Cavallaro ◽  
Eric Risley ◽  
Paige Lockburner
Keyword(s):  
Adult Female ◽  
Rural Areas ◽  
Surveillance Systems ◽  
Black Flies ◽  
Culex Mosquito ◽  
Sticky Traps ◽  
Black Fly ◽  
Equine Encephalitis Virus ◽  
Simulium Decorum ◽  
Average Standard Error

ABSTRACT Sentinel surveillance systems demonstrate an improved ability to supplement monitoring data and anticipate arbovirus outbreaks (i.e., sentinel avian species). Management complications can arise during unpredictable or unseasonal disease detections, especially in rural areas where resident distribution is patchy. Using spillways near residential lake communities as static surveillance locations, we tested a novel partially submerged sticky trapping technique and screened wild populations of adult female black flies (Diptera: Simuliidae) for West Nile virus (WNV) and eastern equine encephalitis virus (EEEV). Trap site selection criteria considered the density of immature black fly colonization on spillway surfaces and the number of positive detections of arboviral targets in nearby Culex mosquito populations. On average (±standard error), sticky traps captured 134 (±33) adult black flies over a 24-h period, with 1 trap capturing as many as 735 individuals. Although we detected positive cases of WNV from 20 Culex mosquito trapping sites within 16 km (approx. flight radius) of the selected lake spillways, mixed pools of adult female Simulium vittatum complex and Simulium decorum were all negative for both arboviruses. This study yielded an application for partially submerged sticky traps to collect adult female black flies. Its potential uses for monitoring the infection rates of more well-documented Simulium parasites are discussed.

Allozyme variation and an estimate of the inbreeding coefficient in the coffee berry borer, Hypothenemus hampei (Coleoptera: Scolytidae)

1995 ◽  
Vol 85 (1) ◽  
pp. 21-28 ◽  
Author(s):  
Philippe Borsa ◽  
D. Pierre Gingerich
Keyword(s):  
Genetic Diversity ◽  
Population Structure ◽  
Population Genetic ◽  
New Caledonia ◽  
Allozyme Variation ◽  
Inbreeding Coefficient ◽  
Hypothenemus Hampei ◽  
Coffee Berry ◽  
Biological Features ◽  
High Degree

AbstractSeven presumed Mendelian enzyme loci (Est-2, Est-3, Gpi, Idh-l, Idh-2, Mdh-2 and Mpi) were characterized and tested for polymorphism in coffee berry borers, Hypothenemus hampei (Ferrari), sampled in Côte d′Ivoire, Mexico and New Caledonia. The average genetic diversity was H = 0.080. Two loci, Mdh-2 and Mpi were polymorphic, and thus usable as genetic markers. The population structure of H. hampei was analysed using Weir & Cockerham's estimators of Wright's F-statistics. A high degree of inbreeding (f = 0.298) characterized the elementary geographic sampling unit, the coffee field. The estimate of gene flow between fields within a country was Nm = 10.6 and that between countries was Nm = 2. The population genetic structure in H. hampei could be related to its known population biological features and history.

scholarly journals Average Number of Nucleotide Differences in a Sample From a Single Subpopulation: A Test for Population Subdivision

Genetics ◽  
1987 ◽  
Vol 117 (1) ◽  
pp. 149-153
Author(s):  
Curtis Strobeck
Keyword(s):  
Monte Carlo Simulation ◽  
Population Structure ◽  
Random Mating ◽  
Population Subdivision ◽  
Expected Number ◽  
Migration Rates ◽  
Mating Population ◽  
Unbiased Estimates ◽  
Increasing Function ◽  
Stepping Stone Model

ABSTRACT Unbiased estimates of θ = 4Nµ in a random mating population can be based on either the number of alleles or the average number of nucleotide differences in a sample. However, if there is population structure and the sample is drawn from a single subpopulation, these two estimates of θ behave differently. The expected number of alleles in a sample is an increasing function of the migration rates, whereas the expected average number of nucleotide differences is shown to be independent of the migration rates and equal to 4N  Tµ for a general model of population structure which includes both the island model and the circular stepping-stone model. This contrast in the behavior of these two estimates of θ is used as the basis of a test for population subdivision. Using a Monte-Carlo simulation developed so that independent samples from a single subpopulation could be obtained quickly, this test is shown to be a useful method to determine if there is population subdivision.

scholarly journals Selection, Load and Inbreeding Depression in a Large Metapopulation

Genetics ◽  
2002 ◽  
Vol 160 (3) ◽  
pp. 1191-1202 ◽  
Author(s):  
Michael C Whitlock
Keyword(s):  
Population Structure ◽  
Inbreeding Depression ◽  
Population Subdivision ◽  
Response To Selection ◽  
Mutation Load ◽  
Deleterious Alleles ◽  
Subdivided Population ◽  
Soft Selection ◽  
Mean Fitness ◽  
The Mean

Abstract The subdivision of a species into local populations causes its response to selection to change, even if selection is uniform across space. Population structure increases the frequency of homozygotes and therefore makes selection on homozygous effects more effective. However, population subdivision can increase the probability of competition among relatives, which may reduce the efficacy of selection. As a result, the response to selection can be either increased or decreased in a subdivided population relative to an undivided one, depending on the dominance coefficient FST and whether selection is hard or soft. Realistic levels of population structure tend to reduce the mean frequency of deleterious alleles. The mutation load tends to be decreased in a subdivided population for recessive alleles, as does the expected inbreeding depression. The magnitude of the effects of population subdivision tends to be greatest in species with hard selection rather than soft selection. Population structure can play an important role in determining the mean fitness of populations at equilibrium between mutation and selection.

scholarly journals Equilibrium Values of Measures of Population Subdivision for Stepwise Mutation Processes

Genetics ◽  
1996 ◽  
Vol 142 (4) ◽  
pp. 1357-1362
Author(s):  
François Rousset
Keyword(s):  
Population Structure ◽  
Population Subdivision ◽  
Identity By Descent ◽  
Infinite Allele Model ◽  
Coalescence Time ◽  
Stepwise Mutation ◽  
Expected Values ◽  
The Relationship ◽  
Allele Model ◽  
Coalescence Times

Abstract Expected values of Wright'sF-statistics are functions of probabilities of identity in state. These values may be quite different under an infinite allele model and under stepwise mutation processes such as those occurring at microsatellite loci. However, a relationship between the probability of identity in state in stepwise mutation models and the distribution of coalescence times can be deduced from the relationship between probabilities of identity by descent and the distribution of coalescence times. The values of FIS and FST can be computed using this property. Examination of the conditional probability of identity in state given some coalescence time and of the distribution of coalescence times are also useful for explaining the properties of FIS and FST at high mutation rate loci, as shown here in an island model of population structure.

scholarly journals A spectral theory for Wright’s inbreeding coefficients and related quantities

PLoS Genetics ◽  
2021 ◽  
Vol 17 (7) ◽  
pp. e1009665
Author(s):  
Olivier François ◽  
Clément Gain
Keyword(s):  
Population Structure ◽  
Genetic Variation ◽  
Population Genetic ◽  
Principal Component ◽  
Large Data ◽  
Population Subdivision ◽  
Adaptive Genetic Variation ◽  
Genomic Locus ◽  
Inbreeding Coefficients ◽  
Definition Of

Wright’s inbreeding coefficient, FST, is a fundamental measure in population genetics. Assuming a predefined population subdivision, this statistic is classically used to evaluate population structure at a given genomic locus. With large numbers of loci, unsupervised approaches such as principal component analysis (PCA) have, however, become prominent in recent analyses of population structure. In this study, we describe the relationships between Wright’s inbreeding coefficients and PCA for a model of K discrete populations. Our theory provides an equivalent definition of FST based on the decomposition of the genotype matrix into between and within-population matrices. The average value of Wright’s FST over all loci included in the genotype matrix can be obtained from the PCA of the between-population matrix. Assuming that a separation condition is fulfilled and for reasonably large data sets, this value of FST approximates the proportion of genetic variation explained by the first (K − 1) principal components accurately. The new definition of FST is useful for computing inbreeding coefficients from surrogate genotypes, for example, obtained after correction of experimental artifacts or after removing adaptive genetic variation associated with environmental variables. The relationships between inbreeding coefficients and the spectrum of the genotype matrix not only allow interpretations of PCA results in terms of population genetic concepts but extend those concepts to population genetic analyses accounting for temporal, geographical and environmental contexts.

scholarly journals Surveillance along the Rio Grande during the 2020 Vesicular Stomatitis Outbreak Reveals Spatio-Temporal Dynamics of and Viral RNA Detection in Black Flies

Pathogens ◽  
2021 ◽  
Vol 10 (10) ◽  
pp. 1264
Author(s):  
Katherine I. Young ◽  
Federico Valdez ◽  
Christina Vaquera ◽  
Carlos Campos ◽  
Lawrence Zhou ◽  
...  
Keyword(s):  
Vegetation Index ◽  
Normalized Difference Vegetation Index ◽  
Temporal Dynamics ◽  
Rio Grande ◽  
Maximum Temperature ◽  
Black Flies ◽  
Southern Mexico ◽  
Black Fly ◽  
The Usa ◽  
Vesicular Stomatitis

Vesicular stomatitis virus (VSV) emerges periodically from its focus of endemic transmission in southern Mexico to cause epizootics in livestock in the US. The ecology of VSV involves a diverse, but largely undefined, repertoire of potential reservoir hosts and invertebrate vectors. As part of a larger program to decipher VSV transmission, we conducted a study of the spatiotemporal dynamics of Simulium black flies, a known vector of VSV, along the Rio Grande in southern New Mexico, USA from March to December 2020. Serendipitously, the index case of VSV-Indiana (VSIV) in the USA in 2020 occurred at a central point of our study. Black flies appeared soon after the release of the Rio Grande’s water from an upstream dam in March 2020. Two-month and one-year lagged precipitation, maximum temperature, and vegetation greenness, measured as Normalized Difference Vegetation Index (NDVI), were associated with increased black fly abundance. We detected VSIV RNA in 11 pools comprising five black fly species using rRT-PCR; five pools yielded a VSIV sequence. To our knowledge, this is the first detection of VSV in the western US from vectors that were not collected on premises with infected domestic animals.

Host–Parasite Behavioral Interactions in a Recently Introduced, Whooping Crane Population

2015 ◽  
Vol 6 (1) ◽  
pp. 220-226 ◽  
Author(s):  
Richard S. King ◽  
Patrick C. McKann ◽  
Brian R. Gray ◽  
Michael S. Putnam
Keyword(s):  
Reproductive Performance ◽  
Black Flies ◽  
Behavioral Differences ◽  
Whooping Crane ◽  
Black Fly ◽  
Grus Canadensis ◽  
Sandhill Crane ◽  
Conservation History ◽  
Whooping Cranes ◽  
Sandhill Cranes

Abstract The whooping crane Grus americana has a long conservation history, but despite multiple attempts across North America, introduction success is lacking. Recently introduced, captively reared whooping cranes have had periods of poor reproductive performance in central Wisconsin that sometimes coincided with black fly (Diptera: Simuliidae) emergences. Sandhill crane Grus canadensis reproductive performance in central Wisconsin is approximately double that of whooping cranes. We used comfort behaviors as a measure of black fly harassment to infer whether behavioral differences existed between nesting sandhill cranes and nesting whooping cranes and between successful and unsuccessful whooping crane pairs. To further explore the interaction between black flies and incubating whooping cranes, we examined differences in behaviors between incubating birds and their off-nest mates. Compared to their off-nest mates, incubating whooping cranes exhibited elevated comfort behaviors, suggesting a bird at a nest may experience greater harassment from black flies. Sandhill cranes had elevated head-flicks over whooping cranes. Whooping cranes exhibited more head-rubs than sandhill cranes, and successful whooping crane pairs had elevated head-rubs over pairs that deserted their nests. Behavioral differences between sandhill cranes and whooping cranes as well as differences in reproductive performance, could be explained by exposure to local breeding conditions. Whereas sandhill cranes have nested in the area for hundreds, if not thousands, of years, whooping cranes were only recently introduced to the area. Behavioral differences between the species as well as those between successful and unsuccessful whooping crane pairs could also be explained by the effect of captive exposure, which could affect all whooping crane introductions.

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