Crystal and molecular structure of potassium [Δ,Λ-racemic-(1-phenylethylenediamine-N,N,N',N'-tetraacetato)cobaltate(III)] sesquihydrate

1990 ◽  
Vol 55 (4) ◽  
pp. 1002-1009 ◽  
Author(s):  
Viktor Kettmann ◽  
Marián E. Kalina ◽  
Ján Lučanský ◽  
Milan Strašák
Keyword(s):  
Molecular Structure ◽  
Crystal And Molecular Structure ◽  
Phenyl Group ◽  
Van Der Waals Interactions ◽  
Orthorhombic System ◽  
X Ray ◽  
Cell Parameters ◽  
Out Of Plane ◽  
Main Factors ◽  
Energy Preference

The crystal and molecular structure of the title compound was determined by X-ray analysis. It crystallizes in the orthorhombic system, space group Ccc2, with cell parameters a = 3.773(3), b = 1.404(11), c = 0.6962(6) nm, V = 3.687 nm3, and Z = 8. The main factors determining stereochemistry of the complex are intramolecular hydrophobic stacking interaction between the methylene hydrogens of the out-of-plane R1 ring and the aromatic ring of the phenyl group, and the nonbonding van der Waals interactions between the methylene hydrogens of the central ethylenediamine (E), in-plane glycinate (G) and R rings as well as of the hydrogens of the phenyl group. The observed stereospecific coordination is due to an energy preference for the equatorially located phenyl group on the E ring.

Crystal and molecular structure of 3-ethyl-4-hydroxy-1,2,3(4H)-benzotriazine and 6-chloro-4-hydroxy-3-methyl-4-phenyl-1,2,3-benzotriazine

1985 ◽  
Vol 63 (3) ◽  
pp. 581-585 ◽  
Author(s):  
Kwong Khee Lai ◽  
Carl H. Schwalbe ◽  
Keith Vaughan ◽  
Ronald J. Lafrance ◽  
Clive D. Whiston
Keyword(s):  
Molecular Structure ◽  
Hydrogen Bonds ◽  
Least Squares ◽  
Least Squares Method ◽  
Crystal And Molecular Structure ◽  
Tetrahedral Geometry ◽  
Orthorhombic System ◽  
Full Matrix ◽  
X Ray ◽  
R Factor

The crystal structures of the title compounds have been determined from X-ray data collected on a four-circle diffractometer and refined by the full-matrix least-squares method. The former compound crystallizes in the orthorhombic system, space group Pbcn, with a = 14.346(8), b = 7.239(1), c = 17.276(2) Å, and has been refined to a conventional R factor of 0.043 for 890 observed reflections. Corresponding results for the latter compound are monoclinic, P21/n, a = 12.222(4), b = 7.482(2), c = 14.170(8) Å, β = 94.06(4)°, R = 0.060 for 2128 observed data. The triazine rings of both compounds exhibit short N(1)—N(2) bonds and tetrahedral geometry at C(4); however, the ring is puckered in the first compound but flat in the second. Molecules in both crystals are linked by [Formula: see text] hydrogen bonds.

The crystal and molecular structure of a 1:1 complex of 5-bromouridine and dimethylsulphoxide

1968 ◽  
Vol 302 (1469) ◽  
pp. 225-236 ◽  
Keyword(s):  
Molecular Structure ◽  
Hydrogen Bonds ◽  
Oxygen Atom ◽  
Diffraction Data ◽  
Crystal And Molecular Structure ◽  
X Ray Diffraction ◽  
Unit Cell Parameters ◽  
X Ray ◽  
Cell Parameters ◽  
Anisotropic Temperature

A complex consisting of one molecule of 5-bromouridine ( BUR ) and one molecule of di­methylsulphoxide ( DMSO ) has been prepared in the form of monoclinic crystals. The unit cell parameters are as follows, a = 13⋅65 ± 0⋅01, b = 4.820 ± 0⋅005, c = 12⋅09 ± 0⋅01 Å, β = 91⋅8 ± 0.1°, space group P 2 1 . X-ray diffraction data ( ⋋ = 1⋅5418 Å) for 1389 independent reflexions were collected and the structure was determined from Patterson syntheses which gave the coordinates of the bromine and sulphur atoms. Fourier syntheses followed by least-squares refinement (including anisotropic temperature parameters) reduced the agreement index R to 0⋅067. The bond lengths and angles for each molecule are given, and it is shown that hydrogen bonds are formed between the oxygen atom of the DMSO molecule and the 03' and 05' of the BUR molecules. A comparison is made between the conformation of the BUR molecule in this complex and that of the same molecule in two other structures.

The crystal structure of C.I. Pigment Red 2, 1′-(2,5-dichlorophenyl)azo-2′hydroxy-3′-phenylamidonaphthalene

1977 ◽  
Vol 146 (4-6) ◽  
Author(s):  
A. Whitaker
Keyword(s):  
Molecular Structure ◽  
Crystal Structure ◽  
Hydrogen Bonds ◽  
Crystal And Molecular Structure ◽  
X Ray Diffraction ◽  
Hydrogen Atoms ◽  
Monoclinic System ◽  
X Ray ◽  
Cell Parameters ◽  
Intramolecular Hydrogen

AbstractThe crystal and molecular structure of C.I. Pigment Red 2, l′-(2,5-dichlorophenyl)azo-2′-hydroxy-3′-phenylamidonaphthalene has been determined by x-ray diffraction techniques. It crystallizes in the monoclinic system with cell parametersThe hydrogen atoms have been found and included but not refined. The final residual is 15.3%. The molecule is probably in the form of the hydrazone tautomer. The intramolecular hydrogen bonds keep most of the molecule approximately planar while it appears that the remainder is held in the same plane due to steric hinderence between the molecules. The molecules are packed in columns with alternate molecules antiparallel and are linked by van der Waals forces.

The crystal and molecular structure of syn-9-phenyl-2,11-dithia[3,3]metacyclophane

1984 ◽  
Vol 62 (4) ◽  
pp. 661-666 ◽  
Author(s):  
Willem Anker ◽  
Kathy A. Beveridge ◽  
Gordon W. Bushnell ◽  
Reginald H. Mitchell
Keyword(s):  
Crystal Structure ◽  
Crystal And Molecular Structure ◽  
Variable Temperature ◽  
Phenyl Group ◽  
Outer Side ◽  
X Ray Diffraction ◽  
X Ray ◽  
Out Of Plane ◽  
Boat Form ◽  
The Mean

The crystal structure of syn-9-phenyl-2,11-dithia[3,3]metacyclophane, 6, has been determined by single crystal X-ray diffraction and refined to an R value of 0.0723. The crystal structure is triclinic with a = 9.573(2), b = 12.010(4), c = 8.433(2) Å, α = 108.02(2)°, β = 95.95(2)°, γ = 102.25(3)°, and the space group is [Formula: see text] with two molecules per cell, D(meas) = 1.313 g cm−3, D(calc) = 1.306 g cm−3. The bridging S atoms differ in their conformations so that the S … S distance is 6.391 Å. The metacyclophane rings have a distance of 3.57 Å between their centres and form a dihedral angle of 20.5°. The phenyl substituent forms an angle of 78.6° with the adjacent ring and has an ortho H-atom very close to the internal H-atom of the opposite ring. The phenyl substituted aromatic ring is non-planar and in a shallow boat form, the ring atoms C(11) (internal) and C(14) being 0.038(4) and 0.037(5) Å out-of-plane on the outside, the methylene C substituents are 0.212(5) and 0.199(5) Å out-of-plane on the inside. The first atom of the phenyl group is in the bowsprit position and is 0.274(4) Å above the mean plane on the outer side of the molecule. The opposite metacyclophane ring is less strained but in a similar boat form with the methylene C-atoms 0.092(4) and 0.067(6) Å to the inside. The mean bond angle at S is 103.5(2)°, the angles at C (methylene) range from 113.3(3)° to 118.0(3)°.The variable temperature 1Hmr spectra results are consistent with the syn conformer 6 being dominant in solution and frozen at temperatures <60 °C as conformer A, with only relatively restricted further twisting of the biphenyl being found at ambient temperature.

scholarly journals The crystal and molecular structure of NaBF3OH

1970 ◽  
Vol 48 (3) ◽  
pp. 405-409 ◽  
Author(s):  
M. J. R. Clark ◽  
H. Lynton
Keyword(s):  
Molecular Structure ◽  
Least Squares ◽  
Crystal And Molecular Structure ◽  
Hydroxyl Group ◽  
Hexagonal System ◽  
X Ray ◽  
Cell Parameters ◽  
Anisotropic Temperature ◽  
Final Agreement ◽  
Atomic Parameters

The crystal and molecular structure of sodium hydroxytrifluoborate, NaBF3OH, has been established by X-ray analysis. This compound crystallizes in the hexagonal system, space group P63 with cell parameters a = 8.084 Å and c = 7.958 Å. There are 6 molecules in the unit cell. Atomic parameters have been obtained from a block-diagonal least-squares refinement using anisotropic temperature parameters for boron and fluorine, and isotropic temperature parameters for sodium. The final agreement residual for 195 observed reflections is R = 0.090.The [BF3OH]− anions are distorted tetrahedra. It was not possible to distinguish between the positions of the fluorine atoms and the isoelectronic hydroxyl group.

The crystal structure of C.I. Pigment Red 6, 4-chloro-2-nitrophenylazo-2-naphthol

1977 ◽  
Vol 145 (3-4) ◽  
Author(s):  
A. Whitaker
Keyword(s):  
Molecular Structure ◽  
Crystal Structure ◽  
Crystal And Molecular Structure ◽  
X Ray Diffraction ◽  
Monoclinic System ◽  
X Ray ◽  
Cell Parameters

AbstractThe crystal and molecular structure of C.I. Pigment Red 6, 4-chloro-2-nitrophenylazo-2-naphthol has been determined by x-ray diffraction techniques. It crystallizes in the monoclinic system with cell parameters

The crystal and molecular structure of tris(pentamethylenedithiocarbamate) chromium(III)-chloroform (1 : 2)

1981 ◽  
Vol 46 (1) ◽  
pp. 6-19 ◽  
Author(s):  
Viktor Kettman ◽  
Ján Garaj ◽  
Jaroslav Majer
Keyword(s):  
Molecular Structure ◽  
Structural Analysis ◽  
Crystal And Molecular Structure ◽  
Analysis Method ◽  
Complex Molecules ◽  
Coordination Polyhedra ◽  
X Ray ◽  
Cell Dimensions ◽  
Crustal Density ◽  
Unit Cell Dimensions

The crystal and molecular structure of [Cr(S2CN(CH2)5)3].2 CHCl3 was found by the X-ray structural analysis method. The value R 0.090 was found for 1 131 observed independent reflections. The substance crystallizes in a space group of symmetry P212121 with the following unit cell dimensions: a = 0.8675 (6), b = 1.815(2), c = 2.155(3) nm. The experimentally observed crustal density was 1.48 Mgm-3 and the value calculated for Z = 4 was 1.51 Mgm-3. The CrS6 coordination polyhedron has the shape of a trigonally distorted octahedron, where the D3 symmetry is a approximately retained. The degree of trigonal distortion expressed as the projection of the chelate S-Cr-S angle onto the plane perpendicular to the C3 pseudo axis is Φ = 41.7° (Φ = 60° for an octahedron). The skeleton of the structure formed by the complex molecules contains channels filled with chloroform molecules. The specific type of complex-chloroform interaction consists of the formation of hydrogen bonds of the chloroform protons with the fully occupied pπ-orbitals of the sulphur atoms in the coordination polyhedra. The low stability and crystal decomposition can be explained by loss of chloroform from the channels.

The Crystal and Molecular Structure of sym-fac-(1,4,7-Triazaheptane)-(S)-aspartatocobalt(III) Diperchlorate Dihydrate

1994 ◽  
Vol 59 (5) ◽  
pp. 1052-1058 ◽  
Author(s):  
Jan Ondráček ◽  
Jana Ondráčková ◽  
Jaroslav Maixner ◽  
František Jursík
Keyword(s):  
Molecular Structure ◽  
Aspartic Acid ◽  
Crystal And Molecular Structure ◽  
Heavy Atom ◽  
Membered Ring ◽  
Boat Conformation ◽  
Hydrogen Atoms ◽  
Orthorhombic System ◽  
Anisotropic Temperature ◽  
Heavy Atom Method

The crystal and molecular structure of s-fac-[Co((S)-Asp)(dien)]ClO4 . HClO4 .2 H2O (dien = 1,4,7-triazaheptane) was solved by the heavy atom method. The position parameters of the non-hydrogen atoms and their anisotropic temperature parameters were refined based on 1 726 observed reflections with a final value of R = 0.073. The substance crystallizes in the orthorhombic system in the space group P212121, Z = 4, a = 8.506(1), b = 17.171(2), c = 13.277(1) Å. The structure involves hydrogen bonds between the O2, O4 and HN2 atoms of aspartic acid and the two molecules of water. The five-membered dien chelate rings take the asymmetric envelope conformations. The five-membered ring of (S)-aspartic acid possesses the symmetric envelope conformation whereas the six-membered ring exhibits the skew boat conformation.

scholarly journals Structural Characterization of Heterodinuclear ZnII-LnIII Complexes (Ln = Pr, Nd) with a Ring-Contracted H2valdien-Derived Schiff Base Ligand

2021 ◽  
Author(s):  
Shabana Noor ◽  
Richard Goddard ◽  
Fehmeeda Khatoon ◽  
Sarvendra Kumar ◽  
Rüdiger W. Seidel
Keyword(s):  
Molecular Structure ◽  
Schiff Base ◽  
Structural Characterization ◽  
Schiff Base Ligand ◽  
Crystal And Molecular Structure ◽  
X Ray ◽  
X Ray Crystallography ◽  
Imidazoline Ring

AbstractSynthesis and structural characterization of two heterodinuclear ZnII-LnIII complexes with the formula [ZnLn(HL)(µ-OAc)(NO3)2(H2O)x(MeOH)1-x]NO3 · n H2O · n MeOH [Ln = Pr (1), Nd (2)] and the crystal and molecular structure of [ZnNd(HL)(µ-OAc)(NO3)2(H2O)] [ZnNd(HL)(OAc)(NO3)2(H2O)](NO3)2 · n H2O · n MeOH (3) are reported. The asymmetrical compartmental ligand (E)-2-(1-(2-((2-hydroxy-3-methoxybenzylidene)amino)-ethyl)imidazolidin-2-yl)-6-methoxyphenol (H2L) is formed from N1,N3-bis(3-methoxysalicylidene)diethylenetriamine (H2valdien) through intramolecular aminal formation, resulting in a peripheral imidazoline ring. The structures of 1–3 were revealed by X-ray crystallography. The smaller ZnII ion occupies the inner N2O2 compartment of the ligand, whereas the larger and more oxophilic LnIII ions are found in the outer O2O2’ site. Graphic Abstract Synthesis and structural characterization of two heterodinuclear ZnII-LnIII complexes (Ln = Pr, Nd) bearing an asymmetrical compartmental ligand formed in situ from N1,N3-bis(3-methoxysalicylidene)diethylenetriamine (H2valdien) through intramolecular aminal formation are reported.

Sign in / Sign up

Export Citation Format

Share Document