scholarly journals Planktonic marine iron oxidizers drive iron mineralization under low-oxygen conditions

Geobiology ◽  
2016 ◽  
Vol 14 (5) ◽  
pp. 499-508 ◽  
Author(s):  
E. K. Field ◽  
S. Kato ◽  
A. J. Findlay ◽  
D. J. MacDonald ◽  
B. K. Chiu ◽  
...  
Keyword(s):  
Low Oxygen ◽  
Oxygen Conditions ◽  
Iron Oxidizers

scholarly journals Identification and Functional Analysis of ThADH1 and ThADH4 Genes Involved in Tolerance to Waterlogging Stress in Taxodium hybrid ‘Zhongshanshan 406’

Genes ◽  
2021 ◽  
Vol 12 (2) ◽  
pp. 225
Author(s):  
Lei Xuan ◽  
Jianfeng Hua ◽  
Fan Zhang ◽  
Zhiquan Wang ◽  
Xiaoxiao Pei ◽  
...  
Keyword(s):  
Ethanol Metabolism ◽  
Flooding Tolerance ◽  
Transcriptome Data ◽  
Low Oxygen ◽  
Anaerobic Conditions ◽  
Waterlogging Tolerance ◽  
Waterlogging Stress ◽  
Adh Genes ◽  
Oxygen Conditions ◽  
Stems And Leaves

The Taxodium hybrid ‘Zhongshanshan 406’ (T. hybrid ‘Zhongshanshan 406’) [Taxodium mucronatum Tenore × Taxodium distichum (L.). Rich] has an outstanding advantage in flooding tolerance and thus has been widely used in wetland afforestation in China. Alcohol dehydrogenase genes (ADHs) played key roles in ethanol metabolism to maintain energy supply for plants in low-oxygen conditions. Two ADH genes were isolated and characterized—ThADH1 and ThADH4 (GenBank ID: AWL83216 and AWL83217—basing on the transcriptome data of T. hybrid ‘Zhongshanshan 406’ grown under waterlogging stress. Then the functions of these two genes were investigated through transient expression and overexpression. The results showed that the ThADH1 and ThADH4 proteins both fall under ADH III subfamily. ThADH1 was localized in the cytoplasm and nucleus, whereas ThADH4 was only localized in the cytoplasm. The expression of the two genes was stimulated by waterlogging and the expression level in roots was significantly higher than those in stems and leaves. The respective overexpression of ThADH1 and ThADH4 in Populus caused the opposite phenotype, while waterlogging tolerance of the two transgenic Populus significantly improved. Collectively, these results indicated that genes ThADH1 and ThADH4 were involved in the tolerance and adaptation to anaerobic conditions in T. hybrid ‘Zhongshanshan 406’.

Pilot-scale production of cloudy juice from low-quality pear fruit under low-oxygen conditions

2015 ◽  
Vol 173 ◽  
pp. 827-837 ◽  
Author(s):  
Domien De Paepe ◽  
Katleen Coudijzer ◽  
Bart Noten ◽  
Dirk Valkenborg ◽  
Kelly Servaes ◽  
...  
Keyword(s):  
Pilot Scale ◽  
Scale Production ◽  
Low Oxygen ◽  
Pear Fruit ◽  
Pilot Scale Production ◽  
Oxygen Conditions

scholarly journals The radiosensitising effect of gemcitabine and its main metabolite dFdU under low oxygen conditions is in vitro not dependent on functional HIF-1 protein

BMC Cancer ◽  
2014 ◽  
Vol 14 (1) ◽  
Author(s):  
An Wouters ◽  
Bea Pauwels ◽  
Natalie Burrows ◽  
Marc Baay ◽  
Vanessa Deschoolmeester ◽  
...  
Keyword(s):  
Low Oxygen ◽  
Main Metabolite ◽  
Oxygen Conditions

scholarly journals Do low oxygen environments facilitate marine invasions? Relative tolerance of native and invasive species to low oxygen conditions

2017 ◽  
Vol 23 (6) ◽  
pp. 2321-2330 ◽  
Author(s):  
Marcelo E. Lagos ◽  
Diego R. Barneche ◽  
Craig R. White ◽  
Dustin J. Marshall
Keyword(s):  
Invasive Species ◽  
Low Oxygen ◽  
Marine Invasions ◽  
Relative Tolerance ◽  
Oxygen Conditions

Benthic foraminiferal response to relative sea-level changes in the Maastrichtian–Danian succession at the Dakhla Oasis, Western Desert, Egypt

2016 ◽  
Vol 155 (3) ◽  
pp. 729-746 ◽  
Author(s):  
SHERIF FAROUK ◽  
SREEPAT JAIN
Keyword(s):  
Sea Level ◽  
Western Desert ◽  
Level Curve ◽  
Sea Level Changes ◽  
Low Oxygen ◽  
Benthic Environment ◽  
Oxygen Conditions ◽  
Early Paleocene ◽  
Dakhla Oasis ◽  
Regional Tectonics

AbstractThe Maastrichtian–Danian benthic foraminiferal diversity and assemblages through sequence stratigraphy were studied at Dakhla Oasis, Egypt. Benthic foraminifera numbers (BFN), high-flux species and characteristic benthic foraminiferal species and genera distribution are also incorporated to assess palaeobathymetry, palaeoenvironment and palaeoproductivity. All these proxies are then taken together to construct a sea-level curve and interpreted in terms of regional tectonics, climate and eustasy. Data suggest a remarkably highly equitable benthic environment deposited in a brackish littoral and/or marsh setting with moderate (?) to low oxygen conditions and reduced salinity (oligotrophic), possibly due to increased precipitation and terrestrial runoff. The interrupted dominance of calcareous forms and high-organic-flux species suggests occasional marine incursions and high palaeoproductivity, due to local upwelling. The inferred sea-level curve replicates the global eustatic curve and suggests that the curve is more influenced by the prevailing climate and global eustasy rather than by regional tectonics. The post-Cretaceous–Palaeogene boundary displays improvement in the environment in terms of diversity and number of species and specimens, with a marked reduction in the abundance of high-organic-flux species during early Paleocene (Danian) time, indicating a shift from a more mesotrophic open marine environment to much reduced oligotrophic conditions.

scholarly journals Oxygenated Mesoproterozoic lake revealed through magnetic mineralogy

2018 ◽  
Vol 115 (51) ◽  
pp. 12938-12943 ◽  
Author(s):  
Sarah P. Slotznick ◽  
Nicholas L. Swanson-Hysell ◽  
Erik A. Sperling
Keyword(s):  
Iron Oxide ◽  
Intermediate Water ◽  
Low Oxygen ◽  
Mineral Assemblages ◽  
Oxygen Conditions ◽  
Terrestrial Environments ◽  
Anoxic Environment ◽  
Nuanced Understanding ◽  
Textural Analyses ◽  
Shed Light

Terrestrial environments have been suggested as an oxic haven for eukaryotic life and diversification during portions of the Proterozoic Eon when the ocean was dominantly anoxic. However, iron speciation and Fe/Al data from the ca. 1.1-billion-year-old Nonesuch Formation, deposited in a large lake and bearing a diverse assemblage of early eukaryotes, are interpreted to indicate persistently anoxic conditions. To shed light on these distinct hypotheses, we analyzed two drill cores spanning the transgression into the lake and its subsequent shallowing. While the proportion of highly reactive to total iron (FeHR/FeT) is consistent through the sediments and typically in the range taken to be equivocal between anoxic and oxic conditions, magnetic experiments and petrographic data reveal that iron exists in three distinct mineral assemblages resulting from an oxycline. In the deepest waters, reductive dissolution of iron oxides records an anoxic environment. However, the remainder of the sedimentary succession has iron oxide assemblages indicative of an oxygenated environment. At intermediate water depths, a mixed-phase facies with hematite and magnetite indicates low oxygen conditions. In the shallowest waters of the lake, nearly every iron oxide has been oxidized to its most oxidized form, hematite. Combining magnetics and textural analyses results in a more nuanced understanding of ambiguous geochemical signals and indicates that for much of its temporal duration, and throughout much of its water column, there was oxygen in the waters of Paleolake Nonesuch.

scholarly journals A Microbial Nitrogen Engine Modulated by Bacteriosyncytia in Hexactinellid Sponges: Ecological Implications for Deep-Sea Communities

2021 ◽  
Vol 8 ◽  
Author(s):  
Manuel Maldonado ◽  
María López-Acosta ◽  
Kathrin Busch ◽  
Beate M. Slaby ◽  
Kristina Bayer ◽  
...  
Keyword(s):  
Deep Sea ◽  
Functional Integration ◽  
Ammonium Assimilation ◽  
Ammonium Nitrogen ◽  
Low Oxygen ◽  
Microbial Nitrogen ◽  
Transmission Electron ◽  
Oxygen Conditions ◽  
Aerobic And Anaerobic ◽  
Hexactinellid Sponges

Hexactinellid sponges are common in the deep sea, but their functional integration into those ecosystems remains poorly understood. The phylogenetically related species Schaudinnia rosea and Vazella pourtalesii were herein incubated for nitrogen and phosphorous, returning markedly different nutrient fluxes. Transmission electron microscopy (TEM) revealed S. rosea to host a low abundance of extracellular microbes, while Vazella pourtalesii showed higher microbial abundance and hosted most microbes within bacteriosyncytia, a novel feature for Hexactinellida. Amplicon sequences of the microbiome corroborated large between-species differences, also between the sponges and the seawater of their habitats. Metagenome-assembled genome of the V. pourtalesii microbiota revealed genes coding for enzymes operating in nitrification, denitrification, dissimilatory nitrate reduction to ammonium, nitrogen fixation, and ammonia/ammonium assimilation. In the nitrification and denitrification pathways some enzymes were missing, but alternative bridging routes allow the microbiota to close a N cycle in the holobiont. Interconnections between aerobic and anaerobic pathways may facilitate the sponges to withstand the low-oxygen conditions of deep-sea habitats. Importantly, various N pathways coupled to generate ammonium, which, through assimilation, fosters the growth of the sponge microbiota. TEM showed that the farmed microbiota is digested by the sponge cells, becoming an internal food source. This microbial farming demands more ammonium that can be provided internally by the host sponges and some 2.6 million kg of ammonium from the seawater become annually consumed by the aggregations of V. pourtalesii. Such ammonium removal is likely impairing the development of the free-living bacterioplankton and the survival chances of other sponge species that feed on bacterioplankton. Such nutritional competitive exclusion would favor the monospecific character of the V. pourtalesii aggregations. These aggregations also affect the surrounding environment through an annual release of 27.3 million kg of nitrite and, in smaller quantities, of nitrate and phosphate. The complex metabolic integration among the microbiota and the sponge suggests that the holobiont depends critically on the correct functioning of its N-driven microbial engine. The metabolic intertwining is so delicate that it changed after moving the sponges out of their habitat for a few days, a serious warning on the conservation needs of these sponge aggregations.

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