The art and design of genetic screens: Drosophila melanogaster

2002 ◽  
Vol 3 (3) ◽  
pp. 176-188 ◽  
Author(s):  
Daniel St Johnston
Genetics ◽  
2000 ◽  
Vol 156 (1) ◽  
pp. 269-282
Author(s):  
Toshiyuki Takano-Shimizu

Abstract Interspecific cross is a powerful means to uncover hidden within- and between-species variation in populations. One example is a bristle loss phenotype of hybrids between Drosophila melanogaster and D. simulans, although both the pure species have exactly the same pattern of bristle formation on the notum. There exists a large amount of genetic variability in the simulans populations with respect to the number of missing bristles in hybrids, and the variation is largely attributable to simulans X chromosomes. Using nine molecular markers, I screened the simulans X chromosome for genetic factors that were responsible for the differences between a pair of simulans lines with high (H) and low (L) missing bristle numbers. Together with duplication-rescue experiments, a single major quantitative locus was mapped to a 13F–14F region. Importantly, this region accounted for most of the differences between H and L lines in three other independent pairs, suggesting segregation of H and L alleles at the single locus in different populations. Moreover, a deficiency screening uncovered several regions with factors that potentially cause the hybrid bristle loss due to epistatic interactions with the other factors.


2002 ◽  
Vol 3 (5) ◽  
pp. 356-369 ◽  
Author(s):  
Erik M. Jorgensen ◽  
Susan E. Mango

2020 ◽  
Vol 10 (3) ◽  
pp. 999-1004
Author(s):  
Juan Carvajal-Garcia ◽  
Evan R. Gales ◽  
Dale A. Ramsden ◽  
Jeff Sekelsky

Repair of damaged DNA is required for the viability of all organisms. Studies in Drosophila melanogaster, driven by the power of genetic screens, pioneered the discovery and characterization of many genes and pathways involved in DNA repair in animals. However, fewer than half of the alleles identified in these screens have been mapped to a specific gene, leaving a potential for new discoveries in this field. Here we show that the previously uncharacterized mutagen sensitive gene mus302 codes for the Drosophila melanogaster ortholog of the E3 ubiquitin ligase RING finger and WD domain protein 3 (RFWD3). In human cells, RFWD3 promotes ubiquitylation of RPA and RAD51 to facilitate repair of collapsed replication forks and double-strand breaks through homologous recombination. Despite the high similarity in sequence to the human ortholog, our evidence fails to support a role for Mus302 in the repair of these types of damage. Last, we observe that the N-terminal third of RFWD3 is only found in mammals, but not in other vertebrates or invertebrates. We propose that the new N-terminal sequence accounts for the acquisition of a new biological function in mammals that explains the functional differences between the human and the fly orthologs, and that Drosophila Mus302 may retain the ancestral function of the protein.


2005 ◽  
Vol 6 (7) ◽  
pp. 557-567 ◽  
Author(s):  
Benjamin T. Kile ◽  
Douglas J. Hilton

Genetics ◽  
2006 ◽  
Vol 172 (4) ◽  
pp. 2309-2324 ◽  
Author(s):  
Matt B. Mahoney ◽  
Annette L. Parks ◽  
David A. Ruddy ◽  
Stanley Y. K. Tiong ◽  
Hanife Esengil ◽  
...  

2008 ◽  
Vol 9 (3) ◽  
pp. 192-203 ◽  
Author(s):  
Héctor Candela ◽  
Sarah Hake

2003 ◽  
Vol 4 (6) ◽  
pp. 419-431 ◽  
Author(s):  
Howard A. Shuman ◽  
Thomas J. Silhavy

2016 ◽  
Author(s):  
Melissa G. Christianson ◽  
Stephanie E. Mauthner ◽  
W. Daniel Tracey

AbstractThe molecular mechanisms of sensing noxious mechanical force by nociceptive sensory neurons remain poorly understood. Traditional methods for probing mechanical nociception behavioral responses are labor intensive and involve the testing of one animal at a time. This time consuming process of behavioral testing has largely precluded large scale analyses. Indeed, large scale genetic screens that have been performed thus far have been largely restricted to the investigation of ion channel genes [1]. Here we describe a new behavioral assay for mechanical nociception in which tens of animals can be stimulated simultaneously. In this assay, third instar larvae of the genetically tractable organism Drosophila melanogaster are mechanically stimulated with tungsten particles that are fired from a gun. We have used the new assay to carry out a genetic screen in which we investigated the function of 231 nociceptor enriched genes with tissue-specific RNA interference. Targeting of 21 genes resulted in mechanically insensitive phenotypes and targeting of a single gene resulted in a hypersensitive mechanical nociception phenotype. Six of the identified genes were previously uncharacterized and these were named after famed Roman gladiators (Spartacus (CG14186), Commodus (CG1311), Flamma (CG10914), Crixus(CG6685), Spiculus (CG10932), and Verus (CG31324)).


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