Internal dynamics of d(CGCAAATTTGCG) 2 : a comparison of NMR relaxation measurements with a molecular dynamics simulation

F. Gaudin; D. Genest; G. Lancelot

doi:10.1007/s002490050076

Internal dynamics of d(CGCAAATTTGCG) 2 : a comparison of NMR relaxation measurements with a molecular dynamics simulation

European Biophysics Journal ◽

10.1007/s002490050076 ◽

1997 ◽

Vol 26 (3) ◽

pp. 239-245 ◽

Cited By ~ 5

Author(s):

F. Gaudin ◽

D. Genest ◽

G. Lancelot

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Nmr Relaxation ◽

Dynamics Simulation ◽

Internal Dynamics ◽

Relaxation Measurements

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A comparison of15N NMR relaxation measurements with a molecular dynamics simulation: Backbone dynamics of the glucocorticoid receptor DNA-binding domain

Proteins Structure Function and Bioinformatics ◽

10.1002/prot.340170406 ◽

1993 ◽

Vol 17 (4) ◽

pp. 375-390 ◽

Cited By ~ 40

Author(s):

Mats A. L. Eriksson ◽

Helena Berglund ◽

Torleif Härd ◽

Lennart Nilsson

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Dna Binding ◽

Glucocorticoid Receptor ◽

Nmr Relaxation ◽

Binding Domain ◽

Dynamics Simulation ◽

Backbone Dynamics ◽

Dna Binding Domain ◽

Relaxation Measurements

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Molecular dynamics simulation of NMR relaxation rates and slow dynamics in lipid bilayers

The Journal of Chemical Physics ◽

10.1063/1.1389469 ◽

2001 ◽

Vol 115 (10) ◽

pp. 4938-4950 ◽

Cited By ~ 87

Author(s):

Erik Lindahl ◽

Olle Edholm

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Lipid Bilayers ◽

Nmr Relaxation ◽

Dynamics Simulation ◽

Relaxation Rates ◽

Slow Dynamics

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Solution Structure of a Type 1 H Antigen Trisaccharide at a Micellar Surface: NMR Relaxation and Molecular Dynamics Simulation Studies

The Journal of Physical Chemistry B ◽

10.1021/jp0136462 ◽

2002 ◽

Vol 106 (20) ◽

pp. 5275-5280 ◽

Cited By ~ 9

Author(s):

Kristina Lycknert ◽

Torgny Rundlöf ◽

Göran Widmalm

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Solution Structure ◽

Nmr Relaxation ◽

Dynamics Simulation ◽

Simulation Studies

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Clathrate formation and dissociation in vapor/water/ice/hydrate systems in SBA-15, sol–gel and CPG porous media, as probed by NMR relaxation, novel protocol NMR cryoporometry, neutron scattering and ab initio quantum–mechanical molecular dynamics simulation

Magnetic Resonance Imaging ◽

10.1016/j.mri.2006.11.022 ◽

2007 ◽

Vol 25 (4) ◽

pp. 533-536 ◽

Cited By ~ 23

Author(s):

J. Beau W. Webber ◽

Ross Anderson ◽

John H. Strange ◽

Bahman Tohidi

Keyword(s):

Molecular Dynamics ◽

Porous Media ◽

Molecular Dynamics Simulation ◽

Sol Gel ◽

Nmr Relaxation ◽

Dynamics Simulation ◽

Quantum Mechanical ◽

Clathrate Formation ◽

Water Ice ◽

Nmr Cryoporometry

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Rotational and translational dynamics and their relation to hydrogen bond lifetimes in an ionic liquid by means of NMR relaxation time experiments and molecular dynamics simulation

The Journal of Chemical Physics ◽

10.1063/1.5011804 ◽

2018 ◽

Vol 148 (19) ◽

pp. 193843 ◽

Cited By ~ 9

Author(s):

Anne Strate ◽

Jan Neumann ◽

Viviane Overbeck ◽

Anne-Marie Bonsa ◽

Dirk Michalik ◽

...

Keyword(s):

Molecular Dynamics ◽

Hydrogen Bond ◽

Ionic Liquid ◽

Relaxation Time ◽

Molecular Dynamics Simulation ◽

Nmr Relaxation ◽

Dynamics Simulation ◽

Nmr Relaxation Time

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Self-Assembley of Dehaloperoxidase-Hemoglobin Probed by Backbone Dynamics using NMR Relaxation Experiments and Molecular Dynamics Simulation

Biophysical Journal ◽

10.1016/j.bpj.2013.11.2638 ◽

2014 ◽

Vol 106 (2) ◽

pp. 466a

Author(s):

Jing Zhao ◽

Mengjun Xue ◽

Hanna Gracz ◽

Stefan Franzen

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Nmr Relaxation ◽

Dynamics Simulation ◽

Backbone Dynamics ◽

Relaxation Experiments

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Characterization of the internal motions of Escherichia coli ribonuclease HI by a combination of 15N-NMR relaxation analysis and molecular dynamics simulation: examination of dynamic models

Biochemistry ◽

10.1021/bi00020a003 ◽

1995 ◽

Vol 34 (20) ◽

pp. 6587-6601 ◽

Cited By ~ 36

Author(s):

Kazuhiko Yamasaki ◽

Minoru Saito ◽

Motohisa Oobatake ◽

Shigenori Kanaya

Keyword(s):

Escherichia Coli ◽

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Dynamic Models ◽

Nmr Relaxation ◽

Dynamics Simulation ◽

15N Nmr ◽

Internal Motions ◽

15N Nmr Relaxation

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Molecular Dynamics Simulation Study of the NMR Relaxation of Xenon-131 Dissolved in 1,3-Dioxane and 1,4-Dioxane

Journal of Magnetic Resonance Series A ◽

10.1006/jmra.1995.1167 ◽

1995 ◽

Vol 115 (2) ◽

pp. 197-205 ◽

Cited By ~ 11

Author(s):

M. Luhmer ◽

J. Reisse

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Simulation Study ◽

Nmr Relaxation ◽

Dynamics Simulation

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Probing Protein Dynamics Using Multifield Variable Temperature NMR Relaxation and Molecular Dynamics Simulation

The Journal of Physical Chemistry B ◽

10.1021/acs.jpcb.8b08578 ◽

2018 ◽

Vol 122 (42) ◽

pp. 9697-9702 ◽

Cited By ~ 3

Author(s):

Baptiste Busi ◽

Jayasubba Reddy Yarava ◽

Albert Hofstetter ◽

Nicola Salvi ◽

Diane Cala-De Paepe ◽

...

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Protein Dynamics ◽

Variable Temperature ◽

Nmr Relaxation ◽

Dynamics Simulation

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Conformational Entropy from Mobile Bond Vectors in Proteins: A Viewpoint that Unifies NMR Relaxation Theory and Molecular Dynamics Simulation Approaches

The Journal of Physical Chemistry B ◽

10.1021/acs.jpcb.0c05846 ◽

2020 ◽

Vol 124 (42) ◽

pp. 9323-9334

Author(s):

Netanel Mendelman ◽

Mirco Zerbetto ◽

Matthias Buck ◽

Eva Meirovitch

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Nmr Relaxation ◽

Dynamics Simulation ◽

Conformational Entropy ◽

Relaxation Theory

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