Group-I intron family in the nuclear ribosomal RNA small subunit genes ofCenococcum geophilum isolates

1996 ◽  
Vol 29 (4) ◽  
pp. 377-387 ◽  
Author(s):  
Mari L. Shinohara ◽  
Katherine F. LoBuglio ◽  
Scott O. Rogers
1996 ◽  
Vol 29 (4) ◽  
pp. 377-387 ◽  
Author(s):  
M. L. Shinohara ◽  
K. F. LoBuglio ◽  
S. O. Rogers

1999 ◽  
Vol 31 (5) ◽  
pp. 441-449 ◽  
Author(s):  
Arne Thell

AbstractPhylogenetic trees based on group I intron sequences and on internal transcribed spacer (ITS) sequences of mycobiont ribosomal genes were calculated and compared. Eight cetrarioid and four non-cetrarioid species of the Parmeliaceae were compared. The phylogeny based on group I intron sequences is partly congruent with the ITS sequence phylogeny. Group I intron sequences are presumably less informative for infragenic studies. The introns have a length of 214–233 nucleotides, and differ at up to 33% of the bases between species. All introns analysed are located between the positions 1516 and 1517 of the fungal 18S ribosomal RNA gene. Cetrarioid lichens form a non-homogeneous group within the Parmeliaceae according to both group I intron and ITS sequences.


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