Transfer RNA modifications and modifying enzymes in Saccharomyces cerevisiae

2005 ◽  
pp. 87-120 ◽  
Author(s):  
Marcus J.O. Johansson ◽  
Anders S. Byström
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Transfer Rna ◽  
Rna Modifications

scholarly journals Identification of D Modification Sites by Integrating Heterogeneous Features in Saccharomyces cerevisiae

Molecules ◽  
2019 ◽  
Vol 24 (3) ◽  
pp. 380 ◽  
Author(s):  
Pengmian Feng ◽  
Zhaochun Xu ◽  
Hui Yang ◽  
Hao Lv ◽  
Hui Ding ◽  
...  
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Ensemble Classifier ◽  
Transfer Rna ◽  
Test Results ◽  
Accurate Identification ◽  
Jackknife Test ◽  
Heterogeneous Features ◽  
Novel Methods

As an abundant post-transcriptional modification, dihydrouridine (D) has been found in transfer RNA (tRNA) from bacteria, eukaryotes, and archaea. Nonetheless, knowledge of the exact biochemical roles of dihydrouridine in mediating tRNA function is still limited. Accurate identification of the position of D sites is essential for understanding their functions. Therefore, it is desirable to develop novel methods to identify D sites. In this study, an ensemble classifier was proposed for the detection of D modification sites in the Saccharomyces cerevisiae transcriptome by using heterogeneous features. The jackknife test results demonstrate that the proposed predictor is promising for the identification of D modification sites. It is anticipated that the proposed method can be widely used for identifying D modification sites in tRNA.

scholarly journals Transfer RNA modifications and genes for modifying enzymes in Arabidopsis thaliana

2010 ◽  
Vol 10 (1) ◽  
pp. 201 ◽  
Author(s):  
Peng Chen ◽  
Gunilla Jäger ◽  
Bo Zheng
Keyword(s):  
Arabidopsis Thaliana ◽  
Transfer Rna ◽  
Rna Modifications
Sign in / Sign up

Export Citation Format

Share Document