scholarly journals Computationally Selected Epitopes: Integrated Approaches Toward High‐Affinity Artificial Protein Binders Obtained via Computationally Simulated Epitopes for Protein Recognition (Adv. Funct. Mater. 15/2019)

2019 ◽  
Vol 29 (15) ◽  
pp. 1970094
Author(s):  
Zeynep Altintas ◽  
Aref Takiden ◽  
Tillmann Utesch ◽  
Maria A. Mroginski ◽  
Bianca Schmid ◽  
...  
2019 ◽  
Vol 29 (15) ◽  
pp. 1807332 ◽  
Author(s):  
Zeynep Altintas ◽  
Aref Takiden ◽  
Tillmann Utesch ◽  
Maria A. Mroginski ◽  
Bianca Schmid ◽  
...  

2011 ◽  
Vol 123 (8) ◽  
pp. 1863-1867 ◽  
Author(s):  
Lotta T. Tegler ◽  
Guillaume Nonglaton ◽  
Frank Büttner ◽  
Karin Caldwell ◽  
Tony Christopeit ◽  
...  

2018 ◽  
Vol 272 ◽  
pp. 441-447 ◽  
Author(s):  
Alena Semeradtova ◽  
Marcel Stofik ◽  
Lucie Vankova ◽  
Petr Maly ◽  
Ondrej Stanek ◽  
...  

Author(s):  
Kiefer O. Ramberg ◽  
Sylvain Engilberge ◽  
Francesca Guagnini ◽  
Peter B. Crowley

Cucurbit[6]uril can recognize and bind the N-terminal Met-Lys motif in proteins. However, the intrapeptide Met-Lys feature does not bind the macrocycle.


2015 ◽  
Vol 6 (10) ◽  
pp. 5419-5425 ◽  
Author(s):  
Linor Unger-Angel ◽  
Bhimsen Rout ◽  
Tal Ilani ◽  
Miriam Eisenstein ◽  
Leila Motiei ◽  
...  

The selective and sensitive identification of different proteins becomes possible by modifying the known intercalating dye, thiazole orange, with two protein binders. These ‘turn-on’ fluorescence probes enable the identification of acetylcholinesterase, glutathione-s-transferases and avidin with high affinity, specificity, and high signal-to-noise ratio.


2011 ◽  
Vol 50 (8) ◽  
pp. 1823-1827 ◽  
Author(s):  
Lotta T. Tegler ◽  
Guillaume Nonglaton ◽  
Frank Büttner ◽  
Karin Caldwell ◽  
Tony Christopeit ◽  
...  

2020 ◽  
Author(s):  
César Carrasco-López ◽  
Evan M. Zhao ◽  
Agnieszka A. Gil ◽  
Nathan Alam ◽  
Jared E. Toettcher ◽  
...  

ABSTRACTCustomizable, high affinity protein-protein interactions, such as those mediated by antibodies and antibody-like molecules, are invaluable to basic and applied research and have become pillars for modern therapeutics. The ability to reversibly control the binding activity of these proteins to their targets on demand would significantly expand their applications in biotechnology, medicine, and research. Here we present, as proof-of-principle, a light-controlled monobody (OptoMB) that works in vitro and in vivo, whose affinity for its SH2-domain target exhibits a 300-fold shift in binding affinity upon illumination. We demonstrate that our αSH2-OptoMB can be used to purify SH2-tagged proteins directly from crude E. coli extract, achieving 99.8% purity and over 40% yield in a single purification step. This OptoMB belongs to a new class of light-sensitive protein binders we call OptoBinders (OptoBNDRs) which, by virtue of their ability to be designed to bind any protein of interest, have the potential to find new powerful applications as light-switchable binders of untagged proteins with high affinity and selectivity, and with the temporal and spatial precision afforded by light.


2021 ◽  
Vol 172 ◽  
pp. 112784
Author(s):  
Jiří Smejkal ◽  
Petr Malý ◽  
Milan Kuchař ◽  
Natalya Panova ◽  
Alena Semerádtová ◽  
...  

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