Methods in Molecular Biology - Metabolic Network Reconstruction and Modeling
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Published By Springer New York

9781493975273, 9781493975280

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Techniques for Large-Scale Bacterial Genome Manipulation and Characterization of the Mutants with Respect to In Silico Metabolic Reconstructions

Methods in Molecular Biology - Metabolic Network Reconstruction and Modeling ◽

10.1007/978-1-4939-7528-0_13 ◽

2017 ◽

pp. 291-314 ◽

Cited By ~ 1

Author(s):

George C. diCenzo ◽

Turlough M. Finan

Keyword(s):

In Silico ◽

Large Scale ◽

Bacterial Genome ◽

Genome Manipulation

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Computational Prediction of Synthetic Lethals in Genome-Scale Metabolic Models Using Fast-SL

Methods in Molecular Biology - Metabolic Network Reconstruction and Modeling ◽

10.1007/978-1-4939-7528-0_14 ◽

2017 ◽

pp. 315-336 ◽

Cited By ~ 1

Author(s):

Karthik Raman ◽

Aditya Pratapa ◽

Omkar Mohite ◽

Shankar Balachandran

Keyword(s):

Computational Prediction ◽

Metabolic Models ◽

Genome Scale ◽

Synthetic Lethals

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Optimization of Multi-Omic Genome-Scale Models: Methodologies, Hands-on Tutorial, and Perspectives

Methods in Molecular Biology - Metabolic Network Reconstruction and Modeling ◽

10.1007/978-1-4939-7528-0_18 ◽

2017 ◽

pp. 389-408 ◽

Cited By ~ 3

Author(s):

Supreeta Vijayakumar ◽

Max Conway ◽

Pietro Lió ◽

Claudio Angione

Keyword(s):

Scale Models ◽

Hands On ◽

Genome Scale

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Reconstructing High-Quality Large-Scale Metabolic Models with merlin

Methods in Molecular Biology - Metabolic Network Reconstruction and Modeling ◽

10.1007/978-1-4939-7528-0_1 ◽

2017 ◽

pp. 1-36 ◽

Cited By ~ 2

Author(s):

Oscar Dias ◽

Miguel Rocha ◽

Eugénio Campos Ferreira ◽

Isabel Rocha

Keyword(s):

Large Scale ◽

High Quality ◽

Metabolic Models

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Metabolic Model Reconstruction and Analysis of an Artificial Microbial Ecosystem

Methods in Molecular Biology - Metabolic Network Reconstruction and Modeling ◽

10.1007/978-1-4939-7528-0_10 ◽

2017 ◽

pp. 219-238 ◽

Cited By ~ 1

Author(s):

Chao Ye ◽

Nan Xu ◽

Xiulai Chen ◽

Liming Liu

Keyword(s):

Metabolic Model ◽

Model Reconstruction ◽

Microbial Ecosystem

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Integrated Host-Pathogen Metabolic Reconstructions

Methods in Molecular Biology - Metabolic Network Reconstruction and Modeling ◽

10.1007/978-1-4939-7528-0_9 ◽

2017 ◽

pp. 197-217 ◽

Cited By ~ 1

Author(s):

Anu Raghunathan ◽

Neema Jamshidi

Keyword(s):

Host Pathogen

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Using PSAMM for the Curation and Analysis of Genome-Scale Metabolic Models

Methods in Molecular Biology - Metabolic Network Reconstruction and Modeling ◽

10.1007/978-1-4939-7528-0_6 ◽

2017 ◽

pp. 131-150 ◽

Cited By ~ 3

Author(s):

Keith Dufault-Thompson ◽

Jon Lund Steffensen ◽

Ying Zhang

Keyword(s):

Metabolic Models ◽

Genome Scale

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The FASTCORE Family: For the Fast Reconstruction of Compact Context-Specific Metabolic Networks Models

Methods in Molecular Biology - Metabolic Network Reconstruction and Modeling ◽

10.1007/978-1-4939-7528-0_4 ◽

2017 ◽

pp. 101-110 ◽

Cited By ~ 3

Author(s):

Maria Pires Pacheco ◽

Thomas Sauter

Keyword(s):

Metabolic Networks ◽

Fast Reconstruction ◽

Context Specific

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Reconstruction and Analysis of Central Metabolism in Microbes

Methods in Molecular Biology - Metabolic Network Reconstruction and Modeling ◽

10.1007/978-1-4939-7528-0_5 ◽

2017 ◽

pp. 111-129 ◽

Cited By ~ 1

Author(s):

Janaka N. Edirisinghe ◽

José P. Faria ◽

Nomi L. Harris ◽

Benjamin H. Allen ◽

Christopher S. Henry

Keyword(s):

Central Metabolism

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Analyzing and Designing Cell Factories with OptFlux

Methods in Molecular Biology - Metabolic Network Reconstruction and Modeling ◽

10.1007/978-1-4939-7528-0_2 ◽

2017 ◽

pp. 37-76 ◽

Cited By ~ 1

Author(s):

Paulo Vilaça ◽

Paulo Maia ◽

Hugo Giesteira ◽

Isabel Rocha ◽

Miguel Rocha

Keyword(s):

Cell Factories

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Methods in Molecular Biology - Metabolic Network Reconstruction and ModelingLatest Publications

TOTAL DOCUMENTS

H-INDEX

Published By Springer New York

Techniques for Large-Scale Bacterial Genome Manipulation and Characterization of the Mutants with Respect to In Silico Metabolic Reconstructions

Computational Prediction of Synthetic Lethals in Genome-Scale Metabolic Models Using Fast-SL

Optimization of Multi-Omic Genome-Scale Models: Methodologies, Hands-on Tutorial, and Perspectives

Reconstructing High-Quality Large-Scale Metabolic Models with merlin

Metabolic Model Reconstruction and Analysis of an Artificial Microbial Ecosystem

Integrated Host-Pathogen Metabolic Reconstructions

Using PSAMM for the Curation and Analysis of Genome-Scale Metabolic Models

The FASTCORE Family: For the Fast Reconstruction of Compact Context-Specific Metabolic Networks Models

Reconstruction and Analysis of Central Metabolism in Microbes

Analyzing and Designing Cell Factories with OptFlux

Methods in Molecular Biology - Metabolic Network Reconstruction and Modeling
Latest Publications