Lecture Notes in Computer Science - Research in Computational Molecular Biology
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Published By Springer International Publishing

9783319569697, 9783319569703

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Progressive Calibration and Averaging for Tandem Mass Spectrometry Statistical Confidence Estimation: Why Settle for a Single Decoy?

Lecture Notes in Computer Science - Research in Computational Molecular Biology ◽

10.1007/978-3-319-56970-3_7 ◽

2017 ◽

pp. 99-116 ◽

Cited By ~ 6

Author(s):

Uri Keich ◽

William Stafford Noble

Keyword(s):

Mass Spectrometry ◽

Tandem Mass Spectrometry ◽

Tandem Mass ◽

Confidence Estimation ◽

Statistical Confidence

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A Bayesian Active Learning Experimental Design for Inferring Signaling Networks

Lecture Notes in Computer Science - Research in Computational Molecular Biology ◽

10.1007/978-3-319-56970-3_9 ◽

2017 ◽

pp. 134-156 ◽

Cited By ~ 2

Author(s):

Robert Osazuwa Ness ◽

Karen Sachs ◽

Parag Mallick ◽

Olga Vitek

Keyword(s):

Experimental Design ◽

Active Learning ◽

Signaling Networks

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Boosting Alignment Accuracy by Adaptive Local Realignment

Lecture Notes in Computer Science - Research in Computational Molecular Biology ◽

10.1007/978-3-319-56970-3_1 ◽

2017 ◽

pp. 1-17 ◽

Cited By ~ 1

Author(s):

Dan DeBlasio ◽

John Kececioglu

Keyword(s):

Alignment Accuracy ◽

Local Realignment

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$$BBK^$$ (Branch and Bound over $$K^$$ ): A Provable and Efficient Ensemble-Based Algorithm to Optimize Stability and Binding Affinity over Large Sequence Spaces

Lecture Notes in Computer Science - Research in Computational Molecular Biology ◽

10.1007/978-3-319-56970-3_10 ◽

2017 ◽

pp. 157-172 ◽

Cited By ~ 2

Author(s):

Adegoke A. Ojewole ◽

Jonathan D. Jou ◽

Vance G. Fowler ◽

Bruce R. Donald

Keyword(s):

Binding Affinity ◽

Branch And Bound ◽

Sequence Spaces

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The Copy-Number Tree Mixture Deconvolution Problem and Applications to Multi-sample Bulk Sequencing Tumor Data

Lecture Notes in Computer Science - Research in Computational Molecular Biology ◽

10.1007/978-3-319-56970-3_20 ◽

2017 ◽

pp. 318-335 ◽

Cited By ~ 8

Author(s):

Simone Zaccaria ◽

Mohammed El-Kebir ◽

Gunnar W. Klau ◽

Benjamin J. Raphael

Keyword(s):

Copy Number ◽

Mixture Deconvolution ◽

Deconvolution Problem

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A Concurrent Subtractive Assembly Approach for Identification of Disease Associated Sub-metagenomes

Lecture Notes in Computer Science - Research in Computational Molecular Biology ◽

10.1007/978-3-319-56970-3_2 ◽

2017 ◽

pp. 18-33 ◽

Cited By ~ 1

Author(s):

Wontack Han ◽

Mingjie Wang ◽

Yuzhen Ye

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Towards Recovering Allele-Specific Cancer Genome Graphs

Lecture Notes in Computer Science - Research in Computational Molecular Biology ◽

10.1007/978-3-319-56970-3_14 ◽

2017 ◽

pp. 224-240 ◽

Cited By ~ 2

Author(s):

Ashok Rajaraman ◽

Jian Ma

Keyword(s):

Cancer Genome ◽

Specific Cancer ◽

Allele Specific

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aBayesQR: A Bayesian Method for Reconstruction of Viral Populations Characterized by Low Diversity

Lecture Notes in Computer Science - Research in Computational Molecular Biology ◽

10.1007/978-3-319-56970-3_22 ◽

2017 ◽

pp. 353-369 ◽

Cited By ~ 5

Author(s):

Soyeon Ahn ◽

Haris Vikalo

Keyword(s):

Bayesian Method ◽

Low Diversity

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A Fast Approximate Algorithm for Mapping Long Reads to Large Reference Databases

Lecture Notes in Computer Science - Research in Computational Molecular Biology ◽

10.1007/978-3-319-56970-3_5 ◽

2017 ◽

pp. 66-81 ◽

Cited By ~ 13

Author(s):

Chirag Jain ◽

Alexander Dilthey ◽

Sergey Koren ◽

Srinivas Aluru ◽

Adam M. Phillippy

Keyword(s):

Approximate Algorithm ◽

Long Reads ◽

Reference Databases

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AllSome Sequence Bloom Trees

Lecture Notes in Computer Science - Research in Computational Molecular Biology ◽

10.1007/978-3-319-56970-3_17 ◽

2017 ◽

pp. 272-286 ◽

Cited By ~ 15

Author(s):

Chen Sun ◽

Robert S. Harris ◽

Rayan Chikhi ◽

Paul Medvedev

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Lecture Notes in Computer Science - Research in Computational Molecular BiologyLatest Publications

TOTAL DOCUMENTS

H-INDEX

Published By Springer International Publishing

Progressive Calibration and Averaging for Tandem Mass Spectrometry Statistical Confidence Estimation: Why Settle for a Single Decoy?

A Bayesian Active Learning Experimental Design for Inferring Signaling Networks

Boosting Alignment Accuracy by Adaptive Local Realignment

$$BBK^*$$ (Branch and Bound over $$K^*$$ ): A Provable and Efficient Ensemble-Based Algorithm to Optimize Stability and Binding Affinity over Large Sequence Spaces

The Copy-Number Tree Mixture Deconvolution Problem and Applications to Multi-sample Bulk Sequencing Tumor Data

A Concurrent Subtractive Assembly Approach for Identification of Disease Associated Sub-metagenomes

Towards Recovering Allele-Specific Cancer Genome Graphs

aBayesQR: A Bayesian Method for Reconstruction of Viral Populations Characterized by Low Diversity

A Fast Approximate Algorithm for Mapping Long Reads to Large Reference Databases

AllSome Sequence Bloom Trees

Lecture Notes in Computer Science - Research in Computational Molecular Biology
Latest Publications

$$BBK^$$ (Branch and Bound over $$K^$$ ): A Provable and Efficient Ensemble-Based Algorithm to Optimize Stability and Binding Affinity over Large Sequence Spaces