Systems Biology and Regulatory Genomics - Lecture Notes in Computer Science
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Published By Springer Berlin Heidelberg

9783540482932, 9783540485407

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A Bayesian Approach for Integrating Transcription Regulation and Gene Expression: Application to Saccharomyces Cerevisiae Cell Cycle Data

Systems Biology and Regulatory Genomics - Lecture Notes in Computer Science ◽

10.1007/978-3-540-48540-7_15 ◽

2007 ◽

pp. 178-187

Author(s):

Sudhakar Jonnalagadda ◽

Rajagopalan Srinivasan

Keyword(s):

Gene Expression ◽

Saccharomyces Cerevisiae ◽

Cell Cycle ◽

Transcription Regulation ◽

Bayesian Approach

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An Interaction-Dependent Model for Transcription Factor Binding

Systems Biology and Regulatory Genomics - Lecture Notes in Computer Science ◽

10.1007/978-3-540-48540-7_19 ◽

2007 ◽

pp. 225-234 ◽

Cited By ~ 6

Author(s):

Li-San Wang ◽

Shane T. Jensen ◽

Sridhar Hannenhalli

Keyword(s):

Transcription Factor ◽

Transcription Factor Binding ◽

Factor Binding ◽

Dependent Model

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Improvement of Computing Times in Boolean Networks Using Chi-square Tests

Systems Biology and Regulatory Genomics - Lecture Notes in Computer Science ◽

10.1007/978-3-540-48540-7_7 ◽

2007 ◽

pp. 70-79

Author(s):

Haseong Kim ◽

Jae K. Lee ◽

Taesung Park

Keyword(s):

Boolean Networks ◽

Chi Square ◽

Chi Square Tests

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Decomposition of Overlapping Protein Complexes: A Graph Theoretical Method for Analyzing Static and Dynamic Protein Associations

Systems Biology and Regulatory Genomics - Lecture Notes in Computer Science ◽

10.1007/978-3-540-48540-7_3 ◽

2007 ◽

pp. 23-38 ◽

Cited By ~ 6

Author(s):

Elena Zotenko ◽

Katia S. Guimarães ◽

Raja Jothi ◽

Teresa M. Przytycka

Keyword(s):

Protein Complexes ◽

Theoretical Method

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Topological Robustness of the Protein-Protein Interaction Networks

Systems Biology and Regulatory Genomics - Lecture Notes in Computer Science ◽

10.1007/978-3-540-48540-7_14 ◽

2007 ◽

pp. 166-177 ◽

Cited By ~ 2

Author(s):

Chien-Hung Huang ◽

Jywe-Fei Fang ◽

Jeffrey J. P. Tsai ◽

Ka-Lok Ng

Keyword(s):

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks ◽

Topological Robustness

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Improved Pattern-Driven Algorithms for Motif Finding in DNA Sequences

Systems Biology and Regulatory Genomics - Lecture Notes in Computer Science ◽

10.1007/978-3-540-48540-7_17 ◽

2007 ◽

pp. 198-211 ◽

Cited By ~ 9

Author(s):

Sing-Hoi Sze ◽

Xiaoyan Zhao

Keyword(s):

Dna Sequences ◽

Motif Finding

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Build a Dictionary, Learn a Grammar, Decipher Stegoscripts, and Discover Genomic Regulatory Elements

Systems Biology and Regulatory Genomics - Lecture Notes in Computer Science ◽

10.1007/978-3-540-48540-7_8 ◽

2007 ◽

pp. 80-94

Author(s):

Guandong Wang ◽

Weixiong Zhang

Keyword(s):

Regulatory Elements

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Characterization of the Effects of TF Binding Site Variations on Gene Expression Towards Predicting the Functional Outcomes of Regulatory SNPs

Systems Biology and Regulatory Genomics - Lecture Notes in Computer Science ◽

10.1007/978-3-540-48540-7_5 ◽

2007 ◽

pp. 51-61

Author(s):

Michal Lapidot ◽

Yitzhak Pilpel

Keyword(s):

Gene Expression ◽

Binding Site ◽

Functional Outcomes ◽

Regulatory Snps

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Computational Characterization and Identification of Core Promoters of MicroRNA Genes in C. elegans, H. sapiens and A. thaliana

Systems Biology and Regulatory Genomics - Lecture Notes in Computer Science ◽

10.1007/978-3-540-48540-7_20 ◽

2007 ◽

pp. 235-248

Author(s):

Xuefeng Zhou ◽

Jianhua Ruan ◽

Guandong Wang ◽

Weixiong Zhang

Keyword(s):

Core Promoters ◽

C Elegans ◽

Microrna Genes

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Combinatorial Genetic Regulatory Network Analysis Tools for High Throughput Transcriptomic Data

Systems Biology and Regulatory Genomics - Lecture Notes in Computer Science ◽

10.1007/978-3-540-48540-7_13 ◽

2007 ◽

pp. 150-165 ◽

Cited By ~ 12

Author(s):

Elissa J. Chesler ◽

Michael A. Langston

Keyword(s):

Network Analysis ◽

High Throughput ◽

Regulatory Network ◽

Genetic Regulatory Network ◽

Transcriptomic Data ◽

Analysis Tools

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Systems Biology and Regulatory Genomics - Lecture Notes in Computer ScienceLatest Publications

TOTAL DOCUMENTS

H-INDEX

Published By Springer Berlin Heidelberg

A Bayesian Approach for Integrating Transcription Regulation and Gene Expression: Application to Saccharomyces Cerevisiae Cell Cycle Data

An Interaction-Dependent Model for Transcription Factor Binding

Improvement of Computing Times in Boolean Networks Using Chi-square Tests

Decomposition of Overlapping Protein Complexes: A Graph Theoretical Method for Analyzing Static and Dynamic Protein Associations

Topological Robustness of the Protein-Protein Interaction Networks

Improved Pattern-Driven Algorithms for Motif Finding in DNA Sequences

Build a Dictionary, Learn a Grammar, Decipher Stegoscripts, and Discover Genomic Regulatory Elements

Characterization of the Effects of TF Binding Site Variations on Gene Expression Towards Predicting the Functional Outcomes of Regulatory SNPs

Computational Characterization and Identification of Core Promoters of MicroRNA Genes in C. elegans, H. sapiens and A. thaliana

Combinatorial Genetic Regulatory Network Analysis Tools for High Throughput Transcriptomic Data

Systems Biology and Regulatory Genomics - Lecture Notes in Computer Science
Latest Publications