Methods in Molecular Biology - Modeling Peptide-Protein Interactions
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Published By Springer New York

9781493967964, 9781493967988

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Modeling Peptide-Protein Structure and Binding Using Monte Carlo Sampling Approaches: Rosetta FlexPepDock and FlexPepBind

Methods in Molecular Biology - Modeling Peptide-Protein Interactions ◽

10.1007/978-1-4939-6798-8_9 ◽

2017 ◽

pp. 139-169 ◽

Cited By ~ 14

Author(s):

Nawsad Alam ◽

Ora Schueler-Furman

Keyword(s):

Monte Carlo ◽

Protein Structure ◽

Monte Carlo Sampling

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Template-Based Prediction of Protein-Peptide Interactions by Using GalaxyPepDock

Methods in Molecular Biology - Modeling Peptide-Protein Interactions ◽

10.1007/978-1-4939-6798-8_4 ◽

2017 ◽

pp. 37-47 ◽

Cited By ~ 6

Author(s):

Hasup Lee ◽

Chaok Seok

Keyword(s):

Peptide Interactions

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Highly Flexible Protein-Peptide Docking Using CABS-Dock

Methods in Molecular Biology - Modeling Peptide-Protein Interactions ◽

10.1007/978-1-4939-6798-8_6 ◽

2017 ◽

pp. 69-94 ◽

Cited By ~ 23

Author(s):

Maciej Paweł Ciemny ◽

Mateusz Kurcinski ◽

Konrad Jakub Kozak ◽

Andrzej Kolinski ◽

Sebastian Kmiecik

Keyword(s):

Peptide Docking ◽

Flexible Protein

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Simplifying the Design of Protein-Peptide Interaction Specificity with Sequence-Based Representations of Atomistic Models

Methods in Molecular Biology - Modeling Peptide-Protein Interactions ◽

10.1007/978-1-4939-6798-8_11 ◽

2017 ◽

pp. 189-200 ◽

Cited By ~ 1

Author(s):

Fan Zheng ◽

Gevorg Grigoryan

Keyword(s):

Atomistic Models ◽

Peptide Interaction

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Enriching Peptide Libraries for Binding Affinity and Specificity Through Computationally Directed Library Design

Methods in Molecular Biology - Modeling Peptide-Protein Interactions ◽

10.1007/978-1-4939-6798-8_13 ◽

2017 ◽

pp. 213-232 ◽

Cited By ~ 2

Author(s):

Glenna Wink Foight ◽

T. Scott Chen ◽

Daniel Richman ◽

Amy E. Keating

Keyword(s):

Binding Affinity ◽

Peptide Libraries ◽

Library Design

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The Usage of ACCLUSTER for Peptide Binding Site Prediction

Methods in Molecular Biology - Modeling Peptide-Protein Interactions ◽

10.1007/978-1-4939-6798-8_1 ◽

2017 ◽

pp. 3-9

Author(s):

Chengfei Yan ◽

Xianjin Xu ◽

Xiaoqin Zou

Keyword(s):

Binding Site ◽

Peptide Binding ◽

Site Prediction ◽

Binding Site Prediction ◽

Peptide Binding Site

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Modeling and Design of Peptidomimetics to Modulate Protein–Protein Interactions

Methods in Molecular Biology - Modeling Peptide-Protein Interactions ◽

10.1007/978-1-4939-6798-8_17 ◽

2017 ◽

pp. 291-307 ◽

Cited By ~ 2

Author(s):

Andrew M. Watkins ◽

Richard Bonneau ◽

Paramjit S. Arora

Keyword(s):

Protein Interactions ◽

Protein Protein Interactions

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Flexible Backbone Methods for Predicting and Designing Peptide Specificity

Methods in Molecular Biology - Modeling Peptide-Protein Interactions ◽

10.1007/978-1-4939-6798-8_10 ◽

2017 ◽

pp. 173-187 ◽

Cited By ~ 1

Author(s):

Noah Ollikainen

Keyword(s):

Peptide Specificity

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Information-Driven, Ensemble Flexible Peptide Docking Using HADDOCK

Methods in Molecular Biology - Modeling Peptide-Protein Interactions ◽

10.1007/978-1-4939-6798-8_8 ◽

2017 ◽

pp. 109-138 ◽

Cited By ~ 15

Author(s):

Cunliang Geng ◽

Siddarth Narasimhan ◽

João P. G. L. M. Rodrigues ◽

Alexandre M. J. J. Bonvin

Keyword(s):

Peptide Docking

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AnchorDock for Blind Flexible Docking of Peptides to Proteins

Methods in Molecular Biology - Modeling Peptide-Protein Interactions ◽

10.1007/978-1-4939-6798-8_7 ◽

2017 ◽

pp. 95-108 ◽

Cited By ~ 1

Author(s):

Michal Slutzki ◽

Avraham Ben-Shimon ◽

Masha Y. Niv

Keyword(s):

Flexible Docking

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Methods in Molecular Biology - Modeling Peptide-Protein InteractionsLatest Publications

TOTAL DOCUMENTS

H-INDEX

Published By Springer New York

Modeling Peptide-Protein Structure and Binding Using Monte Carlo Sampling Approaches: Rosetta FlexPepDock and FlexPepBind

Template-Based Prediction of Protein-Peptide Interactions by Using GalaxyPepDock

Highly Flexible Protein-Peptide Docking Using CABS-Dock

Simplifying the Design of Protein-Peptide Interaction Specificity with Sequence-Based Representations of Atomistic Models

Enriching Peptide Libraries for Binding Affinity and Specificity Through Computationally Directed Library Design

The Usage of ACCLUSTER for Peptide Binding Site Prediction

Modeling and Design of Peptidomimetics to Modulate Protein–Protein Interactions

Flexible Backbone Methods for Predicting and Designing Peptide Specificity

Information-Driven, Ensemble Flexible Peptide Docking Using HADDOCK

AnchorDock for Blind Flexible Docking of Peptides to Proteins

Methods in Molecular Biology - Modeling Peptide-Protein Interactions
Latest Publications