Morphofunctional characteristic of the unstirred water layer intestinal epithelium and its role in absorption/bioavailability of drugs (literature review)

The aim of the article – analysis of the main morphological and functional characteristics of intestine epithelium unstirred water layer (UWL) and its role in molecular mechanisms of absorption/bioavailability of orally administered drugs. The method of UWL thickness determination based on effective permeability (Peff) values under various speed of intestinal perfusion flow as well as this indicator importance for solutions absorption determination there was also discussed the process of drugs is discussed absorption in the gastrointestinal tract which is provided by such physical processes as passive diffusion, facilitated diffusion and active transport, involving the UWL, membranes and endothelial tight junctions. The diffusion of small molecules to the cytoplasm is a rather fast process, thus passive transcellular permeability is determined by only the intestinal apical membrane diffusion. The mechanisms of transcellular and paracellular drugs transport in the intestinal epithelium are described. The possible molecular mechanisms of drugs molecules permeability by facilitated diffusion without energy consumption with channel formers and transfer proteins are discussed. The attention was to the active transport process through the enterocyte membrane with the help of transporters against the concentration gradient which is fulfilled with energy consumption due to ATP or other energy supplies. The classification of such transporters is given based an the transport direction (inside the cell – influx, or out off the cell – efflux) and regarding the organic substance transferred. The role of enterocyte enzymatic system CYP3A4 in drugs metabolism processes regulation is mentioned, which can influence their bioavailability. Key words: drugs, absorption, intestine epithelium, unstirred water layer, entherocyte, transcellular transport, intercellular transport

Testing the time-of-flight model for flagellar length sensing

Cilia and flagella are microtubule-based organelles that protrude from the surface of most cells, are important to the sensing of extracellular signals, and make a driving force for fluid flow. Maintenance of flagellar length requires an active transport process known as intraflagellar transport (IFT). Recent studies reveal that the amount of IFT injection negatively correlates with the length of flagella. These observations suggest that a length-dependent feedback regulates IFT. However, it is unknown how cells recognize the length of flagella and control IFT. Several theoretical models try to explain this feedback system. We focused on one of the models, the “time-of-flight” model, which measures the length of flagella on the basis of the travel time of IFT protein in the flagellar compartment. We tested the time-of-flight model using Chlamydomonas dynein mutant cells, which show slower retrograde transport speed. The amount of IFT injection in dynein mutant cells was higher than that in control cells. This observation does not support the prediction of the time-of-flight model and suggests that Chlamydomonas uses another length-control feedback system rather than that described by the time-of-flight model.

C11orf70 mutations causing primary ciliary dyskinesia disrupt a conserved step in the intraflagellar transport-dependent assembly of multiple axonemal dyneins

Primary ciliary dyskinesia (PCD) is a genetically and phenotypically heterogeneous disorder characterized by destructive respiratory disease and laterality abnormalities due to randomised left-right body asymmetry. PCD is mostly caused by mutations affecting components of the core axoneme structure of motile cilia that are essential for cilia movement. In addition, there is a growing group of PCD genes that encode proteins essential for the assembly of the ciliary dynein motors and the active transport process that delivers them from their cytoplasmic assembly site into the axoneme. We screened a cohort of affected individuals for disease-causing mutations using a targeted next generation sequencing panel and identified 2 unrelated families (3 affected children) with mutations in the uncharacterized C11orf70 gene. The affected children share a consistent PCD phenotype from early life with laterality defects and immotile respiratory cilia displaying combined loss of inner and outer dynein arms (IDA+ODA). Phylogenetic analysis shows C11orf70 is highly conserved, distributed across species similarly to proteins involved in the intraflagellar transport (IFT)-dependant assembly of axonemal dyneins. Paramecium C11orf70 RNAi knockdown led to combined loss of ciliary IDA+ODA with reduced cilia beating and swim velocity. Fluorescently tagged C11orf70 in Paramecium and Chlamydomonas localises mainly in the cytoplasm with a small amount in the ciliary component, its abundance in the axoneme being IFT-dependant. During ciliogenesis, C11orf70 accumulates at the ciliary tips in a similar distribution to the IFT-B protein IFT46. In summary, C11orf70 is essential for IFT-dependant assembly of dynein arms and C11orf70 mutations cause defective cilia motility and PCD.

Methanobactin transport machinery

Methanotrophic bacteria use methane, a potent greenhouse gas, as their primary source of carbon and energy. The first step in methane metabolism is its oxidation to methanol. In almost all methanotrophs, this chemically challenging reaction is catalyzed by particulate methane monooxygenase (pMMO), a copper-dependent integral membrane enzyme. Methanotrophs acquire copper (Cu) for pMMO by secreting a small ribosomally produced, posttranslationally modified natural product called methanobactin (Mbn). Mbn chelates Cu with high affinity, and the Cu-loaded form (CuMbn) is reinternalized into the cell via an active transport process. Bioinformatic and gene regulation studies suggest that two proteins might play a role in CuMbn handling: the TonB-dependent transporter MbnT and the periplasmic binding protein MbnE. Disruption of the gene that encodes MbnT abolishes CuMbn uptake, as reported previously, and expression of MbnT inEscherichia coliconfers the ability to take up CuMbn. Biophysical studies of MbnT and MbnE reveal specific interactions with CuMbn, and a crystal structure of apo MbnE is consistent with MbnE's proposed role as a periplasmic CuMbn transporter. Notably, MbnT and MbnE exhibit different levels of discrimination between cognate and noncognate CuMbns. These findings provide evidence for CuMbn–protein interactions and begin to elucidate the molecular mechanisms of its recognition and transport.

A Dual Role for Actin and Microtubule Cytoskeleton in the Transport of Golgi Units from the Nurse Cells to the Oocyte Across Ring Canals

Axis specification during Drosophila embryonic development requires transfer of maternal components during oogenesis from nurse cells (NCs) into the oocyte through cytoplasmic bridges. We found that the asymmetrical distribution of Golgi, between nurse cells and the oocyte, is sustained by an active transport process. We have characterized actin basket structures that asymmetrically cap the NC side of Ring canals (RCs) connecting the oocyte. Our results suggest that these actin baskets structurally support transport mechanisms of RC transit. In addition, our tracking analysis indicates that Golgi are actively transported to the oocyte rather than diffusing. We observed that RC transit is microtubule-based and mediated at least by dynein. Finally, we show that actin networks may be involved in RC crossing through a myosin II step process, as well as in dispatching Golgi units inside the oocyte subcompartments.

Bioenergetics and mechanical actuation analysis with membrane transport experiments for use in biomimetic nastic structures

Nastic structures are synthetic constructs capable of controllable deformation and shape change similar to plant motility, designed to imitate the biological process of nastic movement found in plants. This paper considers the mechanics and bioenergetics of a prototype nastic structure system consisting of an array of cylindrical microhydraulic actuators embedded in a polymeric plate. Non-uniform expansion/contraction of the actuators in the array may yield an overall shape change resulting in structural morphing. Actuator expansion/contraction is achieved through pressure changes produced by active transport across a bilayer membrane. The active transport process relies on ion-channel proteins that pump sucrose and water molecules across a plasma membrane against the pressure gradient. The energy required by this process is supplied by the hydrolysis of adenosine triphosphate. After reviewing the biochemistry and bioenergetics of the active transport process, the paper presents an analysis of the microhydraulic actuator mechanics predicting the resulting displacement and output energy. Experimental demonstration of fluid transport through a protein transporter follows this discussion. The bilayer membrane is formed from 1-Palmitoyl-2-Oleoyl-sn-Glycero-3-[Phospho-L-Serine] (Sodium Salt), 1-Palmitoyl-2-Oleoyl-sn-Glycero- 3-Phosphoethanolamine lipids to support the AtSUT4 H+-sucrose cotransporter.

Inorganic carbon acquisition and its energization in eustigmatophyte algae

The eustigmatophyceans are primitive unicellular algae that represent the most basal group of ochrophytes. They are believed to be obligate photoautotrophs, occurring mainly in freshwater and soil but with some marine representatives. The freshwater eustigmatophytes Monodus subterraneus and Vischeria stellata, and the marine eustigmatophyte Nannochloropsis gaditana, have been studied by mass spectrometry with respect to their characteristics for inorganic carbon (Ci) uptake. A CO2 concentrating mechanism was found in all three, but an external carbonic anhydrase (CA) was not detected. The acquisition of Ci from the external medium was based on the active transport of HCO3–, CO2, or both. In particular, N. gaditana was able to use HCO3– exclusively as an exogenous carbon source for photosynthesis, with this HCO3– being subsequently converted to CO2 by an intracellular CA for photosynthetic fixation. A unique characteristic of this species was its capacity to transport HCO3– during prolonged periods of time in the dark. In contrast, M. subterraneus utilized CO2 alone through an active transport process, whereas V. stellataexhibited the capacity to transport both HCO3– and CO2. The uptake of CO2 also continued in the dark in V. stellatacells. Regardless of the Ci species taken up, transport was abolished by anoxia and by inhibitors of mitochondrial respiration. These results indicate that that the supply of Ci for photosynthetic CO2 fixation is partly dependent upon mitochondrial activity in these primitive eukaryotes.

Basic Domains Target Protein Subunits of the RNase MRP Complex to the Nucleolus Independently of Complex Association

The RNase MRP and RNase P ribonucleoprotein particles both function as endoribonucleases, have a similar RNA component, and share several protein subunits. RNase MRP has been implicated in pre-rRNA processing and mitochondrial DNA replication, whereas RNase P functions in pre-tRNA processing. Both RNase MRP and RNase P accumulate in the nucleolus of eukaryotic cells. In this report we show that for three protein subunits of the RNase MRP complex (hPop1, hPop4, and Rpp38) basic domains are responsible for their nucleolar accumulation and that they are able to accumulate in the nucleolus independently of their association with the RNase MRP and RNase P complexes. We also show that certain mutants of hPop4 accumulate in the Cajal bodies, suggesting that hPop4 traverses through these bodies to the nucleolus. Furthermore, we characterized a deletion mutant of Rpp38 that preferentially associates with the RNase MRP complex, giving a first clue about the difference in protein composition of the human RNase MRP and RNase P complexes. On the basis of all available data on nucleolar localization sequences, we hypothesize that nucleolar accumulation of proteins containing basic domains proceeds by diffusion and retention rather than by an active transport process. The existence of nucleolar localization sequences is discussed.

Uptake of 2-Oxoglutarate inSynechococcus Strains Transformed with the Escherichia coli kgtP Gene

ABSTRACT A number of cyanobacteria from different taxonomic groups exhibited very low levels of uptake of 2-[U-14C]oxoglutarate.Synechococcus sp. strain PCC 7942 was transformed with DNA constructs carrying the Escherichia coli kgtP gene encoding a 2-oxoglutarate permease and a kanamycin resistance gene cassette. The Synechococcus sp. strains bearing thekgtP gene incorporated 2-oxoglutarate into the cells through an active transport process. About 75% of the radioactivity from the 2-[U-14C]oxoglutarate taken up that was recovered in soluble metabolites was found as glutamate and glutamine. 2-Oxoglutarate was, however, detrimental to the growth of aSynechococcus sp. strain bearing the kgtP gene.

A nuclear localization signal can enhance both the nuclear transport and expression of 1 kb DNA

Although the entry of DNA into the nucleus is a crucial step of non-viral gene delivery, fundamental features of this transport process have remained unexplored. This study analyzed the effect of linear double stranded DNA size on its passive diffusion, its active transport and its NLS-assisted transport. The size limit for passive diffusion was found to be between 200 and 310 bp. DNA of 310–1500 bp entered the nuclei of digitonin treated cells in the absence of cytosolic extract by an active transport process. Both the size limit and the intensity of DNA nuclear transport could be increased by the attachment of strong nuclear localization signals. Conjugation of a 900 bp expression cassette to nuclear localization signals increased both its nuclear entry and expression in microinjected, living cells.