dice similarity index
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2021 ◽  
Vol 1 (2) ◽  
Author(s):  
BHARATH BALAJI R ◽  
PRADEPP K V

The segmentation, identification, and extraction of contaminated tumour regions from magnetic resonance (MR) images is a serious problem, but it is a time-consuming and labor-intensive operation carried out by radiologists or clinical experts, whose accuracy is totally reliant on their knowledge. As a consequence, using computer-assisted technologies to circumvent these limits becomes more vital. In this study, we looked into Berkeley wavelet transformation (BWT) based brain tumour segmentation to improve performance and reduce the complexity of the medical image segmentation process. Furthermore, relevant properties are extracted from each segmented tissue to improve the support vector machine (SVM) based classifier's accuracy and quality rate. The experimental results of the recommended technique have been examined and validated for performance and quality analysis on magnetic resonance brain pictures based on accuracy, sensitivity, specificity, and dice similarity index coefficient. With 96.51 percent accuracy, 94.2 percent specificity, and 97.72 percent sensitivity, the recommended technique for discriminating normal and diseased tissues from brain MR images was shown to be effective. The results of the testing revealed an average dice similarity index coefficient of 0.82, showing that the automated (machine) extracted tumour area coincided with the manually determined tumour region by radiologists. The simulation results show the relevance of quality parameters and accuracy when compared to state-of-the-art approaches. The main objective is to develop a smartphone app for identifying brain tumours.


2018 ◽  
Vol 2018 ◽  
pp. 1-8 ◽  
Author(s):  
Bijen Khagi ◽  
Goo-Rak Kwon

Using deep neural networks for segmenting an MRI image of heterogeneously distributed pixels into a specific class assigning a label to each pixel is the concept of the proposed approach. This approach facilitates the application of the segmentation process on a preprocessed MRI image, with a trained network to be utilized for other test images. As labels are considered expensive assets in supervised training, fewer training images and training labels are used to obtain optimal accuracy. To validate the performance of the proposed approach, an experiment is conducted on other test images (available in the same database) that are not part of the training; the obtained result is of good visual quality in terms of segmentation and quite similar to the ground truth image. The average computed Dice similarity index for the test images is approximately 0.8, whereas the Jaccard similarity measure is approximately 0.6, which is better compared to other methods. This implies that the proposed method can be used to obtain reference images almost similar to the segmented ground truth images.


Author(s):  
Nor Hashimah Sulaiman ◽  
Daud Mohamad ◽  
Jamilah Mohd Shariff ◽  
Sharifah Aniza Sayed Ahmad ◽  
Kamilah Abdullah

Comparing fuzzy numbers is an essential process in deducing the output of many fuzzy decision making methods. One of the comparison methods commonly used is by using similarity measure. The main advantage of the similarity measure over other approaches is its ability to minimize the loss of information in the computational process. Several similarity measures have been applied effectively in fuzzy decision making methods. In this paper, a new similarity measure based on the geometric distance, the center of gravity, Hausdorf distance and the set theoretic similarity formula known as the Dice similarity index are incorporated into the Extended Fuzzy Technique for Order Preference by Similarity to Ideal Solution (FTOPSIS) method particularly in calculating the closeness coefficients. This similarity measure is in favor of others as it is able to discriminate two similar shape fuzzy numbers effectively with two different locations. A validation process is carried out by implementing the proposed procedure of the Extended FTOPSIS with the new similarity measure in solving a supplier selection problem and the ranking outcome is then compared with the Extended FTOPSIS with other existing similarity measure. The result shows that the Extended FTOPSIS with the proposed similarity measure gives a consistent result without reducing any information in the computational process.


2017 ◽  
Vol 2017 ◽  
pp. 1-12 ◽  
Author(s):  
Nilesh Bhaskarrao Bahadure ◽  
Arun Kumar Ray ◽  
Har Pal Thethi

The segmentation, detection, and extraction of infected tumor area from magnetic resonance (MR) images are a primary concern but a tedious and time taking task performed by radiologists or clinical experts, and their accuracy depends on their experience only. So, the use of computer aided technology becomes very necessary to overcome these limitations. In this study, to improve the performance and reduce the complexity involves in the medical image segmentation process, we have investigated Berkeley wavelet transformation (BWT) based brain tumor segmentation. Furthermore, to improve the accuracy and quality rate of the support vector machine (SVM) based classifier, relevant features are extracted from each segmented tissue. The experimental results of proposed technique have been evaluated and validated for performance and quality analysis on magnetic resonance brain images, based on accuracy, sensitivity, specificity, and dice similarity index coefficient. The experimental results achieved 96.51% accuracy, 94.2% specificity, and 97.72% sensitivity, demonstrating the effectiveness of the proposed technique for identifying normal and abnormal tissues from brain MR images. The experimental results also obtained an average of 0.82 dice similarity index coefficient, which indicates better overlap between the automated (machines) extracted tumor region with manually extracted tumor region by radiologists. The simulation results prove the significance in terms of quality parameters and accuracy in comparison to state-of-the-art techniques.


2016 ◽  
Vol 2016 ◽  
pp. 1-7 ◽  
Author(s):  
Yun Tian ◽  
Yutong Pan ◽  
Fuqing Duan ◽  
Shifeng Zhao ◽  
Qingjun Wang ◽  
...  

The segmentation of coronary arteries is a vital process that helps cardiovascular radiologists detect and quantify stenosis. In this paper, we propose a fully automated coronary artery segmentation from cardiac data volume. The method is built on a statistics region growing together with a heuristic decision. First, the heart region is extracted using a multi-atlas-based approach. Second, the vessel structures are enhanced via a 3D multiscale line filter. Next, seed points are detected automatically through a threshold preprocessing and a subsequent morphological operation. Based on the set of detected seed points, a statistics-based region growing is applied. Finally, results are obtained by setting conservative parameters. A heuristic decision method is then used to obtain the desired result automatically because parameters in region growing vary in different patients, and the segmentation requires full automation. The experiments are carried out on a dataset that includes eight-patient multivendor cardiac computed tomography angiography (CTA) volume data. The DICE similarity index, mean distance, and Hausdorff distance metrics are employed to compare the proposed algorithm with two state-of-the-art methods. Experimental results indicate that the proposed algorithm is capable of performing complete, robust, and accurate extraction of coronary arteries.


2015 ◽  
Vol 2015 ◽  
pp. 1-10 ◽  
Author(s):  
Dong-Kyun Lee ◽  
Uicheul Yoon ◽  
Kichang Kwak ◽  
Jong-Min Lee

While segmentation of the cerebellum is an indispensable step in many studies, its contrast is not clear because of the adjacent cerebrospinal fluid, meninges, and cerebra peduncle. Thus, various cerebellar segmentation methods, such as a deformable model or a template-based algorithm might exhibit incorrect segmentation of the venous sinuses and the cerebellar peduncle. In this study, we propose a fully automated procedure combining cerebellar tissue classification, a template-based approach, and morphological operations sequentially. The cerebellar region was defined approximately by removing the cerebral region from the brain mask. Then, the noncerebellar region was trimmed using a morphological operator and the brain-stem atlas was aligned to the individual brain to define the brain-stem area. The proposed method was validated with the well-known FreeSurfer and ITK-SNAP packages using the dice similarity index and recall and precision scores. As a result, the proposed method was significantly better than the other methods for the dice similarity index (0.93, FreeSurfer: 0.92, ITK-SNAP: 0.87) and precision (0.95, FreeSurfer: 0.90, ITK-SNAP: 0.93). Therefore, it could be said that the proposed method yielded a robust and accurate segmentation result. Moreover, additional postprocessing with the brain-stem atlas could improve its result.


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