A Comparison of Burglary Near Repeat Victimization Between Rural and Urban Areas Using a Target-Based Assessment of Criminal Opportunity

Numerous studies have shown that near repeat victimization of burglaries can account for a substantial minority of burglaries in urban settings. Using a method based on the distribution of potential targets to determine the size of spatial bandwidths, the presence of burglary near repeats in rural areas was examined and compared to the level of near repeats in urban areas. A significant burglary near repeat pattern was observed in rural areas, but was restricted to the spatial and temporal bands that were closest to and most recently after a previous burglary. The proportion of all burglaries that were near repeats in this nearest spatial and temporal bands was greater than that observed in urban areas. The findings lead to extending how the boost account and offender foraging principles may apply in rural settings, and the identification of crime prevention opportunities that counter near repeats in rural areas.

Antibiotic Resistance, spa Typing and Clonal Analysis of Methicillin-Resistant Staphylococcus aureus (MRSA) Isolates from Blood of Patients Hospitalized in the Czech Republic

Staphylococcus aureus is one of the major causes of bloodstream infections. The aim of our study was to characterize methicillin-resistant Staphylococcus aureus (MRSA) isolates from blood of patients hospitalized in the Czech Republic between 2016 and 2018. All MRSA strains were tested for antibiotic susceptibility, analyzed by spa typing and clustered using a Based Upon Repeat Pattern (BURP) algorithm. The representative isolates of the four most common spa types and representative isolates of all spa clonal complexes were further typed by multilocus sequence typing (MLST) and staphylococcal cassette chromosome mec (SCCmec) typing. The majority of MRSA strains were resistant to ciprofloxacin (94%), erythromycin (95.5%) and clindamycin (95.6%). Among the 618 strains analyzed, 52 different spa types were detected. BURP analysis divided them into six different clusters. The most common spa types were t003, t586, t014 and t002, all belonging to the CC5 (clonal complex). CC5 was the most abundant MLST CC of our study, comprising of 91.7% (n = 565) of spa-typeable isolates. Other CCs present in our study were CC398, CC22, CC8, CC45 and CC97. To our knowledge, this is the biggest nationwide study aimed at typing MRSA blood isolates from the Czech Republic.

Homicide concentration and retaliatory homicide near repeats: An examination in a Latin American urban setting

Despite numerous attempts to decrease homicides in the Latin American region, high homicide levels have persisted. Examining four cities in Rio de Janeiro, the research reveals the intense geographic concentration of homicides in each city, but illustrates differences in the extent of homicide concentration when using a variety of crime concentration measures. Single events involving multiple homicides and a homicide near repeat pattern are observed, with almost all these incidents taking place in areas of homicide concentration. The findings suggest that programmes targeted to areas of homicide concentration, including interventions that suppress the likelihood of future incidents, could decrease homicides.

The Impact of “Strike Hard” on Repeat and Near-Repeat Residential Burglary in Beijing

“Strike Hard” is an enhanced law-enforcement strategy in China that aims to suppress crime, but measurement of the crime-reducing effect and potential changes in the spatiotemporal concentration of crime associated with “Strike Hard” remain unknown. This paper seeks to examine the impact, if any, of “Strike Hard” on the spatiotemporal clustering of burglary incidents. Two and half years of residential burglary incidents from Chaoyang, Beijing are used to examine repeat and near-repeat burglary incidents before, during, and after the “Strike Hard” intervention and a new technique that enables the comparison of repeat and near repeat patterns across different temporal periods is introduced to achieve this. The results demonstrate the intervention disrupted the repeat pattern during the “Strike Hard” period reducing the observed ratio of single-day repeat burglaries by 155%; however, these same single-day repeat burglary events increased by 41% after the cessation of the intervention. Findings with respect to near repeats are less remarkable with nominal evidence to support that the intervention produced a significant decrease, but coupled with other results, suggest that spatiotemporal displacement may have been an undesired by-product of “Strike Hard”. This study from a non-Western setting provides further evidence of the generalizability of findings related to repeat and near repeat patterns of burglary and further highlights the limited preventative effect that the “Strike Hard” enhanced law enforcement campaign had on burglary.

Repeat pattern segmentation of print fabric based on adaptive template matching

Patterned fabrics are generally constructed from the periodic repetition of a primitive pattern unit. Repeat pattern segmentation of printed fabrics has a very significant impact on the pattern retrieval and pattern defect detection. In this paper, we propose a new approach for repeat pattern segmentation by employing the adaptive template matching method. In contrast to the traditional method for template matching, the proposed algorithm first selects an adaptive size template image in the repeat pattern image based on the size of the original image and its local maximum edge density. Then it uses the sum of absolute differences as the matching features to identify the matched regions in the original image, and the minimum envelope border of the primitive pattern, typically as a parallelogram, can be determined from the results of the four adjacent matched templates. Finally, image traversal base on the obtained parallelogram is implemented over the original image using minimum information loss theory to produce a well-segmented primitive pattern with a complete edge structure. The results from the experiments conducted using an extensive database of real fabric images show that the proposed algorithm has the advantage of rotation invariance and scaling invariance and will not be affected when the background or foreground color is changed.

TideHunter: efficient and sensitive tandem repeat detection from noisy long-reads using seed-and-chain

Motivation Pacific Biosciences (PacBio) and Oxford Nanopore Technologies (ONT) sequencing technologies can produce long-reads up to tens of kilobases, but with high error rates. In order to reduce sequencing error, Rolling Circle Amplification (RCA) has been used to improve library preparation by amplifying circularized template molecules. Linear products of the RCA contain multiple tandem copies of the template molecule. By integrating additional in silico processing steps, these tandem sequences can be collapsed into a consensus sequence with a higher accuracy than the original raw reads. Existing pipelines using alignment-based methods to discover the tandem repeat patterns from the long-reads are either inefficient or lack sensitivity. Results We present a novel tandem repeat detection and consensus calling tool, TideHunter, to efficiently discover tandem repeat patterns and generate high-quality consensus sequences from amplified tandemly repeated long-read sequencing data. TideHunter works with noisy long-reads (PacBio and ONT) at error rates of up to 20% and does not have any limitation of the maximal repeat pattern size. We benchmarked TideHunter using simulated and real datasets with varying error rates and repeat pattern sizes. TideHunter is tens of times faster than state-of-the-art methods and has a higher sensitivity and accuracy. Availability and implementation TideHunter is written in C, it is open source and is available at https://github.com/yangao07/TideHunter

Unraveling the 4n − 1 rule for DNA i-motif stability: base pairs vs. loop lengths

The 4n − 1 repeat pattern for poly-2′-deoxycytidine i-motifs results from ideal loop lengths and core base pairs.