pevk region
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2020 ◽  
Vol 24 ◽  
pp. 100859
Author(s):  
Dassanayake Mudiyanselage Sudarshi Premawardhana ◽  
Fang Zhang ◽  
Jin Xu ◽  
Matthew J. Gage

2020 ◽  
Vol 21 (11) ◽  
pp. 3974 ◽  
Author(s):  
Kiisa Nishikawa ◽  
Stan L. Lindstedt ◽  
Anthony Hessel ◽  
Dhruv Mishra

Since its belated discovery, our understanding of the giant protein titin has grown exponentially from its humble beginning as a sarcomeric scaffold to recent recognition of its critical mechanical and signaling functions in active muscle. One uniquely useful model to unravel titin’s functions, muscular dystrophy with myositis (mdm), arose spontaneously in mice as a transposon-like LINE repeat insertion that results in a small deletion in the N2A region of titin. This small deletion profoundly affects hypertrophic signaling and muscle mechanics, thereby providing insights into the function of this specific region and the consequences of its dysfunction. The impact of this mutation is profound, affecting diverse aspects of the phenotype including muscle mechanics, developmental hypertrophy, and thermoregulation. In this review, we explore accumulating evidence that points to the N2A region of titin as a dynamic “switch” that is critical for both mechanical and signaling functions in skeletal muscle. Calcium-dependent binding of N2A titin to actin filaments triggers a cascade of changes in titin that affect mechanical properties such as elastic energy storage and return, as well as hypertrophic signaling. The mdm phenotype also points to the existence of as yet unidentified signaling pathways for muscle hypertrophy and thermoregulation, likely involving titin’s PEVK region as well as the N2A signalosome.


2019 ◽  
pp. g3.200714.2018 ◽  
Author(s):  
Kathleen Muenzen ◽  
Jenna Monroy ◽  
Findley R. Finseth
Keyword(s):  

2018 ◽  
Author(s):  
Kathleen Muenzen ◽  
Jenna Monroy ◽  
Findley R. Finseth

ABSTRACTThe protein titin plays a key role in vertebrate muscle where it acts like a giant molecular spring. Despite its importance and conservation over vertebrate evolution, a lack of high quality annotations in non-model species makes comparative evolutionary studies of titin challenging. The PEVK region of titin—named for its high proportion of Pro-Glu-Val-Lys amino acids—is particularly difficult to annotate due to its abundance of alternatively spliced isoforms and short, highly repetitive exons. To understand PEVK evolution across mammals, we first developed a bioinformatics tool, PEVK_Finder, to annotate PEVK exons from genomic sequences of titin and then applied it to a diverse set of mammals. PEVK_Finder consistently outperforms standard annotation tools across a broad range of conditions and improves annotations of the PEVK region in non-model mammalian species. We find that the PEVK region can be divided into two subregions (PEVK-N, PEVK-C) with distinct patterns of evolutionary constraint and divergence. The bipartite nature of the PEVK region has implications for titin diversification. In the PEVK-N region, certain exons are conserved and may be essential, but natural selection also acts on particular codons. This region is also rich in glutamate and may contribute to actin binding. In the PEVK-C, exons are more homogenous and length variation of the PEVK region may provide the raw material for evolutionary adaptation in titin function. Taken together, we find that the very complexity that makes titin a challenge for annotation tools may also promote evolutionary adaptation.


2016 ◽  
Vol 110 (3) ◽  
pp. 302a
Author(s):  
Sudarshi Premawardhana ◽  
Matthew J. Gage

2014 ◽  
Vol 143 (2) ◽  
pp. 215-230 ◽  
Author(s):  
Danielle Buck ◽  
John E. Smith ◽  
Charles S. Chung ◽  
Yasuko Ono ◽  
Hiroyuki Sorimachi ◽  
...  

Titin is a molecular spring that determines the passive stiffness of muscle cells. Changes in titin’s stiffness occur in various myopathies, but whether these are a cause or an effect of the disease is unknown. We studied a novel mouse model in which titin’s stiffness was slightly increased by deleting nine immunoglobulin (Ig)-like domains from titin’s constitutively expressed proximal tandem Ig segment (IG KO). KO mice displayed mild kyphosis, a phenotype commonly associated with skeletal muscle myopathy. Slow muscles were atrophic with alterations in myosin isoform expression; functional studies in soleus muscle revealed a reduced specific twitch force. Exon expression analysis showed that KO mice underwent additional changes in titin splicing to yield smaller than expected titin isoforms that were much stiffer than expected. Additionally, splicing occurred in the PEVK region of titin, a finding confirmed at the protein level. The titin-binding protein Ankrd1 was highly increased in the IG KO, but this did not play a role in generating small titin isoforms because titin expression was unaltered in IG KO mice crossed with Ankrd1-deficient mice. In contrast, the splicing factor RBM20 (RNA-binding motif 20) was also significantly increased in IG KO mice, and additional differential splicing was reversed in IG KO mice crossed with a mouse with reduced RBM20 activity. Thus, increasing titin’s stiffness triggers pathological changes in skeletal muscle, with an important role played by RBM20.


2013 ◽  
Vol 104 (2) ◽  
pp. 310a-311a
Author(s):  
Rebecca Slater ◽  
Charles S. Chung ◽  
Michael Gotthardt ◽  
Henk L. Granzier
Keyword(s):  

2010 ◽  
Vol 2010 ◽  
pp. 1-8 ◽  
Author(s):  
Wei Guo ◽  
Sheila J. Bharmal ◽  
Karla Esbona ◽  
Marion L. Greaser

Titin is an extremely large protein found in highest concentrations in heart and skeletal muscle. The single mammalian gene is expressed in multiple isoforms as a result of alternative splicing. Although titin isoform expression is controlled developmentally and in a tissue specific manner, the vast number of potential splicing pathways far exceeds those described in any other alternatively spliced gene. Over 1 million human splice pathways for a single individual can be potentially derived from the PEVK region alone. A new splicing pattern for the human cardiac N2BA isoform type has been found in which the PEVK region includes only the N2B type exons. The alterations in splicing and titin isoform expression in human heart disease provide impetus for future detailed study of the splicing mechanisms for this giant protein.


2009 ◽  
Vol 105 (6) ◽  
pp. 557-564 ◽  
Author(s):  
Henk L. Granzier ◽  
Michael H. Radke ◽  
Jun Peng ◽  
Dirk Westermann ◽  
O. Lynne Nelson ◽  
...  

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