The Influence of Hydrogen Passivation on Conductive Properties of Graphene Nanomesh—Prospect Material for Carbon Nanotubes Growing

Graphene nanomesh (GNM) is one of the most intensively studied materials today. Chemical activity of atoms near GNM’s nanoholes provides favorable adsorption of different atoms and molecules, besides that, GNM is a prospect material for growing carbon nanotubes (CNTs) on its surface. This study calculates the dependence of CNT’s growing parameters on the geometrical form of a nanohole. It was determined by the original methodic that the CNT’s growing from circle nanoholes was the most energetically favorable. Another attractive property of GNM is a tunable gap in its band structure that depends on GNM’s topology. It is found by quantum chemical methods that the passivation of dangling bonds near the hole of hydrogen atoms decreases the conductance of the structure by 2–3.5 times. Controlling the GNM’s conductance may be an important tool for its application in nanoelectronics.

Primary Amine Nucleophilic Addition to Nitrilium Closo-Dodecaborate [B12H11NCCH3]–: A Simple and Effective Route to the New BNCT Drug Design

In the present work, a convenient and straightforward approach to the preparation of borylated amidines based on the closo-dodecaborate anion [B12H11NCCH3NHR]–, R=H, Alk, Ar was developed. This method has two stages. A nitrile derivative of the general form [B12H11NCCH3]− was obtained, using a modified technique, in the first stage. On the second stage the resulting molecular system interacted with primary amines to form the target amidine products. This approach is characterised by a simple chemical apparatus, mild conditions and high yields of the final products. The mechanism of the addition of amine to the nitrile derivative of the closo-dodecaborate anion was studied, using quantum-chemical methods. The interaction between NH3 and [B12H11NCCH3]− ammonia was chosen as an example. It was found that the structure of the transition state determines the stereo-selectivity of the process. A study of the biological properties of borylated amidine sodium salts indicated that the substances had low toxicity and could accumulate in cancer cells in significant amounts.

Is There Any Linkage between Interstellar Aldehyde and Alcohol?

It is speculated that there might be some linkage between interstellar aldehydes and their corresponding alcohols. Here an observational study and astrochemical modeling are coupled together to illustrate the connection between them. The ALMA cycle 4 data of a hot molecular core, G10.47+0.03, are utilized for this study. Various aldehydes (acetaldehyde, propanal, and glycolaldehyde), alcohols (methanol and ethylene glycol), and a ketone (acetone) are identified in this source. The excitation temperatures and column densities of these species were derived via the rotation diagram method assuming local thermodynamic equilibrium conditions. An extensive investigation is carried out to understand the formation of these species. Six pairs of aldehyde–alcohol are considered for this study: (i) methanal and methanol, (ii) ethanal and ethanol, (iii) propanal and 1-propanol, (iv) propenal and allyl alcohol, (v) propynal and propargyl alcohol, and (vi) glycolaldehyde and ethylene glycol. One pair of ketone–alcohol (acetone and isopropanol) and ketene–alcohol (ethenone and vinyl alcohol) are also considered. Two successive hydrogenation reactions in the ice phase are examined to form these alcohols from aldehydes, ketone, and ketene, respectively. Quantum chemical methods are extensively executed to review the ice-phase formation route and the kinetics of these species. Based on the obtained kinetic data, astrochemical modeling is employed to derive the abundances of these aldehydes, alcohols, ketone, and ketene in this source. It is seen that our model could successfully explain the observed abundances of various species in this hot molecular core.

Monomolecular Films of Organic Diacyl Diperoxides on the Interface of the Phases Water–Air

Monomolecular films of diacyl diperoxides at the water–air phase interface have been studied. Their behaviour is influenced by the structure of the molecule and the solvent. The numerical values of the areas of molecules that are extrapolated to zero pressure are different, which indicates a different conformation of the molecules in the monolayer. The conformational states of diperoxides were calculated by quantum chemical methods. Experimental data and quantum chemical calculations are consistent with each other.

Cubic Octa-Carbon: Quantum-Chemical Design of Molecular Structure and Potential Way of Its Synthesis from Cubane

Quantum-chemical calculation of most important parameters of molecular and electronic structures of octa-carbon C8 having cubic form (bond lengths, bond and torsion angles) using CCSD(T)/QZVP and DFT B3PW91/QZVP methods, has been carried out. NBO analysis data and HOMO/LUMO images for this compound are presented, too. Good agreement was found between the structural data obtained using the above two quantum-chemical methods and, also, with corresponding experimental data. Also, the standard thermodynamic parameters of formation of cubic C8 considered here, and namely standard enthalpy ΔfH0(298K), entropy Sf0(298K) and Gibbs’ energy ΔfG0(298K) of formation for this compound were calculated. By using this data, a theoretically possible variant of the synthesis of this compound by dehydrogenation of cubane C8H8 is considered, and the thermodynamic characteristics of each of the four stages of this process have been calculated. It is noted that each of the four stages of this process is characterized by a very high (about 500 kJ/mol) enthalpy of activation, as a result of that, for their realization within a sufficiently short time, the use of appropriate catalysts is necessary.

Elaboration of a Predictive Qsar Model of the Anti-Paludial Activity of a Series of Dihydrothiophenone Molecules at Theory Level B3LYP/ 6-31G (d, p)

The purpose of this study is to develop a QSAR model predictive of the antimalarial activity of a series of Dihydrothiophenone molecules using quantum chemical methods. The molecules were optimized from the B3LYP/6-31G (d, p) level of theory. The extracted descriptors are the vibrational frequency of the carbonyl group (Ѵ(C=O)), enthalpy of formation (Δ f H°), the valence angle between the carbon-nitrogen-carbon atoms α(C-N-C) and the ionization potential (I); The application of the RLM method of the XLSTAT program allowed us to develop a regression model. The statistical indicators (R²=93.50%, S=0.211, F=43.678) of the developed model attest to its robustness and reliability. Internal and external validation parameters (Q2loo et Q2ext) reveal that the established model performs well in predicting the antimalarial activity of the series of molecules studied. It can therefore be used to design new HD molecules belonging to its field of applicability at a 95% confidence level.

Hydration dynamics gives the distinctive brown color in the "brown ring" nitrate test

The brown ring test is one of the most popular and visually appealing reagent tests, commonly known to chemistry undergrads and familiar even to school students. The exact composition, mechanism and structure of the complex has been investigated for nearly a century. Recent studies have elucidated its UV-vis, EPR and Mossbauer spectra, mechanistic details and kinetics, followed by crystallization and structure determination in solid state. Nonetheless these studies were unable to address the aspects of solution structure and dynamics of the brown ring complex. We have conducted ab initio molecular dynamics simulations of the classic brown ring complex in aqueous solution. In the process from the simulation trajectory, we have identified that the classically established pseudo-octahedral [Fe(H2O)5(NO)]2+ complex is in chemical equilibrium with the square-pyramidal [Fe(H2O)4(NO)]2+ complex through the exchange of one of the coordinated H2O molecules. The dynamics in aqueous solution between the penta-aqua and tetra-aqua complexes in the brown ring system has to our knowledge never been suggested earlier. Interestingly we find, using ab initio multi-reference quantum chemical methods i.e. CASSCF/NEVPT2 and CASPT2 calculations, that the mixture of these two complexes is what gives the distinctive brown coloration to the brown ring test. We show that its UV-vis spectrum can be theoretically reproduced only by accounting these two species, and not solely the classically established [Fe(H2O)5(NO)]2+ complex. The energetics of the penta-aqua and tetra-aqua complexes is also investigated at the level of multi-reference quantum chemical methods.