Seasonal and interannual variability in the density of the postlarvae of Litopenaeus setiferus and Farfantepenaeus duorarum in Términos Lagoon, Gulf of Mexico

White shrimps, Litopenaeus setiferus (Linnaeus, 1767) and pink shrimps, Farfantepenaeus duorarum (Burkenroad, 1939) are two pivotal species in the southern Gulf of Mexico, due to their ecological and economic importance. In this study we present observational evidence of the seasonal and interannual variability of both species in the Términos Lagoon (southern Gulf of Mexico). The results suggest that the hydrography of the water column and the surface circulation exert a strong influence on the density of both species. The results presented here contribute to a better understanding of the dynamics of both species and highlight the need to combine different methodologies to achieve a better interpretation of this system.

Population Genomics of the Commercially Important Gulf of Mexico Pink Shrimp Farfantepenaeus duorarum (Burkenroad, 1939) Support Models of Juvenile Transport Around the Florida Peninsula

The Gulf of Mexico pink shrimp, Farfantepenaeus duorarum, supports large fisheries in the United States and Mexico, with nearly 7,000 tons harvested from the region in 2016. Given the commercial importance of this species, management is critical: in 1997, the southern Gulf of Mexico pink shrimp fishery was declared collapsed and mitigation strategies went into effect, with recovery efforts lasting over a decade. Fisheries management can be informed and improved through a better understanding of how factors associated with early life history impact genetic diversity and population structure in the recruited population. Farfantepenaeus duorarum are short-lived, but highly fecund, and display high variability in recruitment patterns. To date, modeling the impacts of ecological, physical, and behavioral factors on juvenile settlement has focused on recruitment of larval individuals of F. duorarum to nursery grounds in Florida Bay. Here, we articulate testable hypotheses stemming from a recent model of larval transport and evaluate support for each with a population genomics approach, generating reduced representation library sequencing data for F. duorarum collected from seven regions around the Florida Peninsula. Our research represents the first and most molecular data-rich study of population structure in F. duorarum in the Gulf and reveals evidence of a differentiated population in the Dry Tortugas. Our approach largely validates a model of larval transport, allowing us to make management-informative inferences about the impacts of spawning location and recruitment patterns on intraspecific genetic diversity. Such inferences improve our understanding of the roles of non-genetic factors in generating and maintaining genetic diversity in a commercially important penaeid shrimp species.

An abnormal rostrum in a wild subadult shrimp Farfantepenaeus duorarum (Burkenroad, 1939) (Decapoda, Penaeidae) from the southern Gulf of Mexico

An abnormal bifid rostrum is reported for the first time for a wild-caught subadult female (carapace length = 22.5 mm) of the pink shrimp Farfantepenaeus duorarum (Burkenroad, 1939) from Celestun lagoon, Yucatan, southern Gulf of Mexico. A review of registers on morphological abnormalities in shrimps of the family Penaeidae is provided.

Seasonal abundance and diel behavior of roughneck shrimps (species of Rimapenaeus Pérez Farfante & Kensley, 1997) (Decapoda: Dendrobranchiata: Penaeidae) in northwestern Florida Bay, Florida, USA

A large number of roughneck shrimps, Rimapenaeus Pérez Farfante & Kensley, 1997, were collected in northwestern Florida Bay, southern Florida over four consecutive years (2000–2003) of monthly sampling during new-moon periods. Juveniles of Rimapenaeus spp. were more abundant than pink shrimp Farfantepenaeus duorarum (Burkenroad, 1939) juveniles, which are well-recognized and abundant inhabitants of Florida Bay. High Rimapenaeus spp. abundance was unexpected because the genus was previously reported only as occasional in Florida Bay. The populations of Rimapenaeus spp. were composed of late postlarvae and immature juveniles, suggesting that the northwestern border of Florida Bay serves as a nursery ground for this species. A clear seasonal recruitment pattern was observed with large peaks of postlarvae and small juveniles occurring in summer-fall and large juveniles in spring. The summer-fall peaks occurred during months with high mean water level and sea surface temperature; these two factors significantly predicted Rimapenaeus spp. abundance. Overnight hourly behavioral studies revealed that Rimapenaeus spp. juveniles were almost exclusively present in the water column during the dark hours of the ebb tide during current speed minimum. Juvenile abundance significantly differed between moon phases with shrimps being virtually absent during the illuminated full moon. These results indicate that Rimapenaeus spp. are phototactic negative, which may explain the low presence of this species in previous Florida Bay surveys conducted during daylight hours. This study highlights the previously unrecognized contribution of the abundance of juveniles of Rimapenaeus spp. to benthic-oriented crustacean communities of western Florida Bay and its border at the southwestern Florida Shelf.

Pink Shrimp Farfantepenaeus duorarum Spatiotemporal Abundance Trends Along an Urban, Subtropical Shoreline Slated for Restoration

The Biscayne Bay Coastal Wetlands (BBCW) project of the Comprehensive Everglades Restoration Plan (CERP) aims to reduce point-source freshwater discharges and spread freshwater flow along the mainland shoreline of southern Biscayne Bay to approximate conditions in the coastal wetlands and bay that existed prior to construction of canals and water control structures. An increase in pink shrimp (Farfantepenaeus duorarum) density to ≥ 2 individuals m−2 during the wet season (i.e., August-October) along the mainland shoreline was previously proposed as an indicator of BBCW success. This study examined pre-BBCW baseline densities and compared them with the proposed target. Densities were monitored by seasonal (wet, dry) throw-trapping (1 m2 replicated in triplicate) at 47 sites along ~22 km of the southwestern Biscayne Bay coastline over 10 years (2007-2016). Densities varied across years and were most often higher in dry seasons. Quantile regression revealed density limitation by four habitat attributes: water temperature (°C), depth (m), salinity (ppt), and submerged aquatic vegetation (SAV: % cover). Procrustean analyses that tested for congruence between shrimp densities and habitat metrics found that water temperature, water depth, and salinity explained ~ 28%, 28%, and 22% of density variability, respectively. No significant relationship with SAV was observed. Hierarchical clustering was used to identify spatially and temporally similar groupings of pink shrimp densities by sites or season-years. Significant groupings were later investigated with respect to potentially limiting habitat attributes. Six site and four year-season clusters were identified. Although habitat attributes significantly differed among spatial clusters, within-cluster median pink shrimp densities did not correlate with within-cluster minima, maxima, medians, or standard deviations of habitat attributes. Pink shrimp densities corresponded significantly with salinity and appeared limited by it. Salinity is an environmental attribute that will be directly influenced by CERP implementation.

Diel variation in the catch of the shrimp Farfantepenaeus duorarum (Decapoda, Penaeidae) and length-weight relationship, in a nursery area of the Terminos Lagoon, Mexico

The pink shrimp, Farfantepenaeus duorarum is an important commercial species in the Gulf of Mexico, which supports significant commercial fisheries near Dry Tortugas, in Southern Florida and in Campeche Sound, Southern Gulf of Mexico. There is information about the nictemeral behavior of the pink shrimp related to sunset, what is crucial to more accurate estimation of shrimp population biomass, and to assess the potential of this resource and its proper management. To contribute to the knowledge and the population dynamics of the species, shrimp surveys were conducted in a nursery area near “El Cayo” in the Northeastern part of Terminos Lagoon, Mexico during October 2010. Three sampling sites with substrate covered by submerged vegetation were chosen; two set of samples were collected at each site, one in the morning and the other just after sunset. Three trawls were performed per sampling site using a small otter trawl. A total of 1 418 shrimp (between 5.5 to 28.8 mm Carapace Length (CL)) were collected during the study; 1 416 F. duorarum and only two individuals of Litopenaeus setiferus. Shrimps CL and Total Length (TL) were measured in mm and individuals were weighted to the nearest 0.01 g. In general, shrimp biomass and density were significantly higher in all sites during dusk (biomass = 46.36 g.100 m-2, n = 1 344), than daylight samples (biomass = 2.78 g.100 m-2, n = 72). The One-way ANOVA and the Tukey test performed to evaluate variability in CL found significant differences between sites (CL = 14.12 mm, 12.46 mm and 15.13 mm, for site 1, 2 and 3 respectively, F = 64.92, P < 0.001) which might be related to the substrate type. The length-weight relationships reflected positive allometric growth for juveniles but isometric for subadults and two nonlinear power functions were estimated (W = 0.0004CL3.157 for juveniles, and W = 0.0009CL2.902 for subadults). The results of the analysis of covariance (ANCOVA) test indicated that the Total Length - Carapace Length (TL-CL) relationships were significantly different between juveniles and subadults, and two linear equations (TL = 2.615 + 4.476CL and TL = 8.931 + 4.062CL for juveniles and subadults respectively) were fitted. It is important that population assessment takes into account the day or night period as a bias factor when sampling the abundance of the juveniles of F. duorarum in this important nursery ground of the Campeche Sound.

Model selection for determining the growth of juveniles and sub-adults of two species of shrimp (Decapoda, Penaeidae) in a tropical coastal lagoon

To select the model that allows the growth curves of juvenile and sub-adult shrimp to be described more accurately, a study was carried out in a coastal lagoon in the south of the Gulf of Mexico on the speciesFarfantepenaeus brasiliensis(Latreille, 1817) andFarfantepenaeus duorarum(Burkenroad, 1939). The data were obtained from 11 monthly samplings, taken between April 2011 and February 2012, applying the catch strategies used by the local fishermen, including the fishing gear used. The carapace length (CL)-total weight (TW) relationship was estimated for both species. Frequency analyses were performed in order to follow the best represented cohorts over time and fit three non-asymptotic growth models: Power, Generalised Schnute and the Indeterminate Tanaka model. The CL-TW relationship of juvenile and sub-adultF. brasiliensiswas TW = 3 × 10−5CL3.75and TW = 8 × 10−5CL3.50forF. duorarum, both of which presented positive allometric growth. In both species the Indeterminate Tanaka model proved to be the best fit to the modal groups of the juvenile and sub-adult shrimp due to its ability to describe the seasonal oscillations in shrimp growth.