Soybean Thrips (Thysanoptera: Thripidae) Harbor Highly Diverse Populations of Arthropod, Fungal and Plant Viruses

Soybean thrips (Neohydatothrips variabilis) are one of the most efficient vectors of soybean vein necrosis virus, which can cause severe necrotic symptoms in sensitive soybean plants. To determine which other viruses are associated with soybean thrips, the metatranscriptome of soybean thrips, collected by the Midwest Suction Trap Network during 2018, was analyzed. Contigs assembled from the data revealed a remarkable diversity of virus-like sequences. Of the 181 virus-like sequences identified, 155 were novel and associated primarily with taxa of arthropod-infecting viruses, but sequences similar to plant and fungus-infecting viruses were also identified. The novel viruses were predicted to have positive-sense RNA, negative-stranded RNA, double-stranded RNA, and single-stranded DNA genomes. The assembled sequences included 100 contigs that represented at least 95% coverage of a virus genome or genome segment. Sequences represented 12 previously described arthropod viruses including eight viruses reported from Hubei Province in China, and 12 plant virus sequences of which six have been previously described. The presence of diverse populations of plant viruses within soybean thrips suggests they feed on and acquire viruses from multiple host plant species that could be transmitted to soybean. Assessment of the virome of soybean thrips provides, for the first time, information on the diversity of viruses present in thrips.

Evaluation of Soybean for Resistance to Neohyadatothrips variabilis (Thysanoptera: Thripidae) Noninfected and Infected With Soybean Vein Necrosis Virus

Soybean vein necrosis virus (SVNV) was first identified in Arkansas and Tennessee in 2008 and is now known to be widespread in the United States and Canada. Multiple species of thrips transmit this and other tospoviruses with Neohydatothrips variabilis (Beach) (soybean thrips) cited as the most efficient vector for SVNV. In this study, 18 soybean, Glycine max (L.) Merr., genotypes were evaluated in four experiments by infesting plants with noninfected and SVNV-infected thrips using choice and no-choice assays. In both choice experiments with noninfected and SVNV-infected thrips, the lowest number of immature soybean thrips occurred on plant introductions (PIs) 229358 and 604464 while cultivars Williams 82 and Williamsfield Illini 3590N supported higher counts of mature thrips. The counts between the two assays (noninfected and SVNV-infected thrips) were positively correlated. In both no-choice experiments with noninfected and SVNV-infected thrips, counts of thrips did not differ by soybean genotypes. Further studies are needed to characterize the inheritance and mechanisms involved in the resistance found in the choice assay.

Alternative Hosts for Soybean vein necrosis virus and Feeding Preferences of Its Vector Soybean Thrips

Soybean vein necrosis virus (SVNV), a tospovirus and one of the most widespread soybean viruses in North America, is primarily transmitted by soybean thrips (Neohydatothrips variabilis). Although soybean is not considered the primary plant host for SVNV, there is a dearth of knowledge about alternative host plants for SVNV. We therefore investigated whether commonly present specialty and cover crops in Iowa can serve as alternative hosts for SVNV. Seventeen cover crops and seven specialty crops were tested using mechanical and thrips inoculations. Clear symptoms of SVNV and systemic infection in buckwheat and clear local infection with possible systemic infection on melon were shown. Additionally, we compared soybean thrips feeding on 18 cover crops and determined that they preferred alfalfa, buckwheat, crimson clover, and red clover. Our results suggested that alternative host crops may harbor SVNV and be a possible source of inoculum for soybean.

Epidemiology of Soybean vein necrosis-associated virus

Soybean vein necrosis-associated virus has been linked to an emerging soybean disease in the United States and Canada. Virus distribution and population structure in major growing areas were evaluated. Data were employed to design and develop sensitive detection protocols, able to detect all virus isolates available in databases. The host range for the virus was assessed and several species were found to sustain virus replication, including ivyleaf morning glory, a common weed species in soybean-growing areas in the United States. Koch's postulates were fulfilled using soybean thrips and transmission efficiency was determined. This article provides significant insight into the biology of the most widespread soybean virus in the United States.

A Survey of Thrips (Thysanoptera) Species Infesting Cotton Seedlings in Alabama, Arkansas, Georgia, Louisiana, Mississippi, and Tennessee

The common species of thrips that are considered pests of cotton, Gossypium hirsutum (L.), include flower thrips, Frankliniella tritici (Fitch); tobacco thrips, Frankliniella fusca (Hinds); western flower thrips, Frankliniella occidentalis (Pergande); onion thrips, Thrips tabaci (Lindeman); and soybean thrips, Neohydatothrips variabilis (Beach). Thrips feeding on cotton seedlings can inhibit plant growth, reduce plant stand, delay crop maturity, and reduce seed-cotton yield. Surveys were conducted in Alabama, Arkansas, Georgia, Louisiana, Mississippi, and Tennessee to determine the thrips species infesting cotton seedlings during 1996 to 1999. Cotton seedlings were sampled weekly between 7 and 48 days after plant emergence at one to four field sites in each state. Over 12,000 thrips adults were collected using plant washing procedures with 9,005 individuals mounted on slides, and identified to species. The tobacco thrips was the most common species collected in all states, except Georgia, and comprised at least 63% of the thrips adults in all instances, except four. The occurrence of flower thrips and soybean thrips was variable; however, neither species accounted for more than 21% of thrips identified in each state. Western flower thrips accounted for less than 15% of adults collected in all instances except two (28% and 30%) in Louisiana. Also, individual specimens of Thrips nigropilosus Uzel and Anophothrips obscurus Müller were collected in Alabama, and several specimens of Microcephalothrips abdominalis (Crawford) were collected in Arkansas and Louisiana.

Seasonal Occurrence of Thrips (Thysanoptera) on Cowpeas in Western Arkansas and Northeast Oklahoma

Three thrips species were commonly found in western Arkansas and northeast Oklahoma cowpea fields during the 1991 and 1992 growing seasons. These were the tobacco thrips, Frankliniella fusca (Hinds), the flower thrips, Frankliniella tritici (Fitch), and the soybean thrips, Sericothrips variabilis (Beach). Earlier planted cowpea fields in each area had higher thrips numbers than later planted fields. Tobacco thrips numbers tended to be higher during the early stages of the crop when the plants were small. As plants began to produce blooms, flower thrips numbers increased considerably. Peak flower thrips numbers typically occurred around two weeks after first bloom. Soybean thrips abundance was generally lower than the other common species and had no apparent pattern. Chirothrips crassus Hinds and Chirothrips spiniceps Hood also were found, but were uncommon.