scholarly journals Boundaries in ground beetle (Coleoptera: Carabidae) and environmental variables at the edges of forest patches with residential developments

PeerJ ◽  
2018 ◽  
Vol 6 ◽  
pp. e4226 ◽  
Author(s):  
Doreen E. Davis ◽  
Sara A. Gagné
Keyword(s):  
Community Structure ◽  
Edge Effects ◽  
Environmental Variables ◽  
Management Practices ◽  
Spatial Scales ◽  
Ground Beetle ◽  
Boundary Structure ◽  
Forest Patches ◽  
Individual Property ◽  
Residential Developments

BackgroundFew studies of edge effects on wildlife objectively identify habitat edges or explore non-linear responses. In this paper, we build on ground beetle (Coleoptera: Carabidae) research that has begun to address these domains by using triangulation wombling to identify boundaries in beetle community structure and composition at the edges of forest patches with residential developments. We hypothesized that edges are characterized by boundaries in environmental variables that correspond to marked discontinuities in vegetation structure between maintained yards and forest. We expected environmental boundaries to be associated with beetle boundaries.MethodsWe collected beetles and measured environmental variables in 200 m by 200 m sampling grids centered at the edges of three forest patches, each with a rural, suburban, or urban context, in Charlotte, North Carolina, USA. We identified boundaries within each grid at two spatial scales and tested their significance and overlap using boundary statistics and overlap statistics, respectively. We complemented boundary delineation withk-means clustering.ResultsBoundaries in environmental variables, such as temperature, grass cover, and leaf litter depth, occurred at or near the edges of all three sites, in many cases at both scales. The beetle variables that exhibited the most pronounced boundary structure in relation to edges were total species evenness, generalist abundance, generalist richness, generalist evenness, andAgonum punctiformeabundance. Environmental and beetle boundaries also occurred within forest patches and residential developments, indicating substantial localized spatial variation on either side of edges. Boundaries in beetle and environmental variables that displayed boundary structure at edges significantly overlapped, as did boundaries on either side of edges. The comparison of boundaries and clusters revealed that boundaries formed parts of the borders of patches of similar beetle or environmental condition.DiscussionWe show that edge effects on ground beetle community structure and composition and environmental variation at the intersection of forest patches and residential developments can be described by boundaries and that these boundaries overlap in space. However, our results also highlight the complexity of edge effects in our system: environmental boundaries were located at or near edges whereas beetle boundaries related to edges could be spatially disjunct from them; boundaries incompletely delineated edges such that only parts of edges were well-described by sharp transitions in beetle and/or environmental variables; and the occurrence of boundaries related to edges was apparently influenced by individual property management practices, site-specific characteristics such as development geometry, and spatial scale.

scholarly journals Fine-Scale Mapping of Mega-Epibenthic Communities and Their Patch Characteristics on Two New Zealand Seamounts

2021 ◽  
Vol 8 ◽  
Author(s):  
Savannah L. Goode ◽  
Ashley A. Rowden ◽  
David A. Bowden ◽  
Malcolm R. Clark ◽  
Fabrice Stephenson
Keyword(s):  
Community Structure ◽  
New Zealand ◽  
Environmental Variables ◽  
Community Dynamics ◽  
Spatial Scales ◽  
Benthic Communities ◽  
Environmental Drivers ◽  
Fine Scale ◽  
Patch Characteristics ◽  
Epibenthic Communities

Seamounts are common features of the deep seafloor that are often associated with aggregations of mega-epibenthic fauna, including deep-sea corals and sponges. Globally, many seamounts also host abundant fish stocks, supporting commercial bottom trawl fisheries that impact non-target benthic species through damage and/or removal of these non-target species. However, the effects of bottom trawling on seamount benthic communities, as well as their recovery potential, will vary over the total seamount area because of differences in within seamount habitat and community structure. It is therefore important to understand fine-scale community dynamics, community patch characteristics, and the environmental drivers contributing to these patterns to improve habitat mapping efforts on seamounts and to determine the potential for benthic communities on seamounts to recover from fishing disturbances. Here we analysed the structure and distribution of mega-epibenthic communities on two New Zealand seamounts with different physical environments to determine which environmental variables best correlated with variation in community structure within each seamount. We used the identified environmental variables to predict the distribution of communities beyond the sampled areas, then described the spatial patterns and patch characteristics of the predicted community distributions. We found the environmental variables that best explained variations in community structure differed between the seamounts and at different spatial scales. These differences were reflected in the distribution models: communities on one seamount were predicted to form bands with depth, while on the other seamount communities varied mostly with broadscale aspect and the presence of small pinnacles. The number and size of community patches, inter-patch distances, and patch connectedness were found to differ both within and between seamounts. These types of analyses and results can be used to inform the spatial management of seamount ecosystems.

Comparative assessment of aquatic macroinvertebrate diversity in irrigated rice fields and wetlands through different spatial scales: an additive partitioning approach

2016 ◽  
Vol 67 (3) ◽  
pp. 368 ◽  
Author(s):  
Mateus Marques Pires ◽  
Carla Bender Kotzian ◽  
Marcia Regina Spies ◽  
Vanessa dos Anjos Baptista
Keyword(s):  
Community Structure ◽  
Management Practices ◽  
Spatial Scales ◽  
Climatic Conditions ◽  
Rice Fields ◽  
Environmental Complexity ◽  
Irrigated Rice ◽  
Wetland Drainage ◽  
Hydrographic Basin ◽  
Natural Wetlands

The role of rice fields as refuges for wetland macroinvertebrates was assessed at multiple spatial scales, and macroinvertebrate diversity was compared between fields and natural wetlands. Because irrigated rice fields are highly disturbed environments, and have lower environmental complexity and heterogeneity in the irrigated phase than do wetlands, we hypothesised that the fields would sustain lower diversity than do wetlands, especially at broader spatial scales. Wetlands and rice fields from three regions in southern Brazil were simultaneously sampled. In wetlands, the broadest scale (hydrographic basin) contributed the most to macroinvertebrate diversity. In rice fields, besides hydrographic basin level, narrower scales (site level) also contributed to macroinvertebrate γ diversity. Different cultivation and management systems may be responsible for the contribution of narrower scales to γ diversity in rice fields. Differences in community structure in both environments were determined by wetland drainage practices, and they were affected by the ENSO climatic phenomenon, which influenced macrophyte diversity in wetlands. Wetland communities were characterised by macrophyte-associated, passive-dispersing taxa, whereas rice fields contained short-lived, active-dispersing macroinvertebrates. The present study demonstrated that rice fields do not represent suitable refugia for wetland-expelled macroinvertebrates because they do not support similar community structure, at least under some management practices and climatic conditions influenced by ENSO.

scholarly journals Effects of Organic Fertilizers on the Soil Microorganisms Responsible for N2O Emissions: A Review

2021 ◽  
Vol 9 (5) ◽  
pp. 983
Author(s):  
Cristina Lazcano ◽  
Xia Zhu-Barker ◽  
Charlotte Decock
Keyword(s):  
Community Structure ◽  
Microbial Community ◽  
Best Management Practices ◽  
Management Practices ◽  
Organic Fertilizers ◽  
N2o Emissions ◽  
Soil C ◽  
Best Management ◽  
C Stocks ◽  
Denitrifying Microorganisms

The use of organic fertilizers constitutes a sustainable strategy to recycle nutrients, increase soil carbon (C) stocks and mitigate climate change. Yet, this depends largely on balance between soil C sequestration and the emissions of the potent greenhouse gas nitrous oxide (N2O). Organic fertilizers strongly influence the microbial processes leading to the release of N2O. The magnitude and pattern of N2O emissions are different from the emissions observed from inorganic fertilizers and difficult to predict, which hinders developing best management practices specific to organic fertilizers. Currently, we lack a comprehensive evaluation of the effects of OFs on the function and structure of the N cycling microbial communities. Focusing on animal manures, here we provide an overview of the effects of these organic fertilizers on the community structure and function of nitrifying and denitrifying microorganisms in upland soils. Unprocessed manure with high moisture, high available nitrogen (N) and C content can shift the structure of the microbial community, increasing the abundance and activity of nitrifying and denitrifying microorganisms. Processed manure, such as digestate, compost, vermicompost and biochar, can also stimulate nitrifying and denitrifying microorganisms, although the effects on the soil microbial community structure are different, and N2O emissions are comparatively lower than raw manure. We propose a framework of best management practices to minimize the negative environmental impacts of organic fertilizers and maximize their benefits in improving soil health and sustaining food production systems. Long-term application of composted manure and the buildup of soil C stocks may contribute to N retention as microbial or stabilized organic N in the soil while increasing the abundance of denitrifying microorganisms and thus reduce the emissions of N2O by favoring the completion of denitrification to produce dinitrogen gas. Future research using multi-omics approaches can be used to establish key biochemical pathways and microbial taxa responsible for N2O production under organic fertilization.

scholarly journals Structure, Diversity, and Environmental Determinants of High-Latitude Threatened Conifer Forests

Forests ◽  
2021 ◽  
Vol 12 (6) ◽  
pp. 775
Author(s):  
Carlos Esse ◽  
Francisco Correa-Araneda ◽  
Cristian Acuña ◽  
Rodrigo Santander-Massa ◽  
Patricio De Los Ríos-Escalante ◽  
...  
Keyword(s):  
Water Table ◽  
Environmental Variables ◽  
National Park ◽  
High Water ◽  
Forest Communities ◽  
Competitive Effect ◽  
Forest Patches ◽  
Last Glaciation ◽  
The World ◽  
Local Topography

Pilgerodendron uviferum (D. Don) Florin is an endemic, threatened conifer that grows in South America. In the sub-Antarctic territory, one of the most isolated places in the world, some forest patches remain untouched since the last glaciation. In this study, we analyze the tree structure and tree diversity and characterize the environmental conditions where P. uviferum-dominated stands develop within the Magellanic islands in Kawésqar National Park, Chile. An environmental matrix using the databases WorldClim and SoilGrids and local topography variables was used to identify the main environmental variables that explain the P. uviferum-dominated stands. PCA was used to reduce the environmental variables, and PERMANOVA and nMDS were used to evaluate differences among forest communities. The results show that two forest communities are present within the Magellanic islands. Both forest communities share the fact that they can persist over time due to the high water table that limits the competitive effect from other tree species less tolerant to high soil water table and organic matter. Our results contribute to knowledge of the species’ environmental preference and design conservation programs.

scholarly journals Archaeal ammonia oxidizers respond to soil factors at smaller spatial scales than the overall archaeal community does in a high Arctic polar oasis

2016 ◽  
Vol 62 (6) ◽  
pp. 485-491 ◽  
Author(s):  
Samiran Banerjee ◽  
Nabla Kennedy ◽  
Alan E. Richardson ◽  
Keith N. Egger ◽  
Steven D. Siciliano
Keyword(s):  
Community Structure ◽  
Spatial Scales ◽  
Archaeal Community ◽  
Diversity Indices ◽  
High Arctic ◽  
Total Carbon ◽  
Spatial Dependency ◽  
Edaphic Factors ◽  
Total Carbon Content ◽  
Arctic Soils

Archaea are ubiquitous and highly abundant in Arctic soils. Because of their oligotrophic nature, archaea play an important role in biogeochemical processes in nutrient-limited Arctic soils. With the existing knowledge of high archaeal abundance and functional potential in Arctic soils, this study employed terminal restriction fragment length polymorphism (t-RFLP) profiling and geostatistical analysis to explore spatial dependency and edaphic determinants of the overall archaeal (ARC) and ammonia-oxidizing archaeal (AOA) communities in a high Arctic polar oasis soil. ARC communities were spatially dependent at the 2–5 m scale (P < 0.05), whereas AOA communities were dependent at the ∼1 m scale (P < 0.0001). Soil moisture, pH, and total carbon content were key edaphic factors driving both the ARC and AOA community structure. However, AOA evenness had simultaneous correlations with dissolved organic nitrogen and mineral nitrogen, indicating a possible niche differentiation for AOA in which dry mineral and wet organic soil microsites support different AOA genotypes. Richness, evenness, and diversity indices of both ARC and AOA communities showed high spatial dependency along the landscape and resembled scaling of edaphic factors. The spatial link between archaeal community structure and soil resources found in this study has implications for predictive understanding of archaea-driven processes in polar oases.

Impacts of switching tillage to no-tillage and vice versa on soil structure, enzyme activities, and prokaryotic community profiles in Argentinean semi-arid soils

2021 ◽  
Author(s):  
L A Gabbarini ◽  
E Figuerola ◽  
J P Frene ◽  
N B Robledo ◽  
F M Ibarbalz ◽  
...  
Keyword(s):  
Community Structure ◽  
Soil Structure ◽  
Management Practices ◽  
Soil Health ◽  
Amplicon Sequencing ◽  
16S Rrna Genes ◽  
Rrna Genes ◽  
Prokaryotic Community ◽  
C Cycle

Abstract The effects of tillage on soil structure, physiology, and microbiota structure were studied in a long-term field experiment, with side-to-side plots, established to compare effects of conventional tillage (CT) vs. no-till (NT) agriculture. After 27 years, part of the field under CT was switched to NT and vice versa. Soil texture, soil enzymatic profiles, and the prokaryotic community structure (16S rRNA genes amplicon sequencing) were analysed at two soil depths (0–5, 5–10 cm) in samples taken 6, 18, and 30 months after switching tillage practices. Soil enzymatic activities were higher in NT than CT, and enzymatic profiles responded to the changes much earlier than the overall prokaryotic community structure. Beta diversity measurements of the prokaryotic community indicated that the levels of stratification observed in long-term NT soils were already recovered in the new NT soils thirty months after switching from CT to NT. Bacteria and Archaea OTUs, which responded to NT were associated with coarse soil fraction, SOC and C cycle enzymes while CT responders were related to fine soil fractions and S cycle enzymes. This study showed the potential of managing the soil prokaryotic community and soil health through changes in agricultural management practices.

Environmental factors including management practices as correlates of weed community composition in spring seeded crops

1992 ◽  
Vol 70 (10) ◽  
pp. 1931-1939 ◽  
Author(s):  
M. R. T. Dale ◽  
A. G. Thomas ◽  
E. A. John
Keyword(s):  
Community Composition ◽  
Correspondence Analysis ◽  
Canonical Correspondence Analysis ◽  
Environmental Variables ◽  
Management Practices ◽  
Geographic Region ◽  
Climatic Conditions ◽  
Weed Species ◽  
Weed Communities ◽  
Seed Crops

The relationship between the weed communities and environmental variables such as soil, crop, and management was investigated in two provinces of Canada. The frequencies of weed species were recorded in cereal and oilseed fields in Saskatchewan (2244 fields over 4 years) and Manitoba (864 fields over 3 years), Canada. Information on some of the physical characteristics of the fields and on the management practices imposed on them was also collected, in part by questionnaire. The two kinds of data were ordinated together using canonical correspondence analysis to assess the relationships between the species and the environmental variables. In the Saskatchewan data, there was a clear and consistent separation of the species into groups along an axis correlated with soil zone and the associated climatic gradient. In the Manitoba data, the same groups of species did not separate as clearly or as consistently, although geographic region was a major determinant of the weed communities. The greater variability may be due to the fact that the gradient of soil types is much more restricted in Manitoba and not as closely correlated with climatic conditions. In both provinces, culture practices were less important as correlates of the weed community composition than soil type or, to a certain extent, the previous crop. Key words: canonical correspondence analysis, cereal crops, oil seed crops.

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