scholarly journals How Sorghum Root Traits can Contribute to Cereal Yield Increase

2021 ◽  
Author(s):  
Tobias Wojciechowski ◽  
Josefine Kant
Keyword(s):  
Genetic Material ◽  
Root Traits ◽  
Root Systems ◽  
Maize Breeding ◽  
Breeding Programs ◽  
Yield Increase ◽  
Drought Tolerant ◽  
Close Relationship ◽  
Interesting Candidate ◽  
Cereal Root

In recent decades the effects of climate change became more visible and the problems it causes for agricultural production and yield maintenance. Future crops need to be higher yielding than today, but at the same time more resilient to drought and increased temperatures, especially in drought-prone regions with erratic precipitation. Sorghum, more heat and drought tolerant than maize, presents an interesting candidate for potential genetic material to provide this increased resilience, containing traits and the underlying genetic loci conferring better performance. Compared to the above-ground tissues, root systems are less investigated, but an improvement in this “hidden half” also improves yield. Due to their close relationship, findings in sorghum may be easily incorporated into maize breeding programs. In this chapter we will review recent literature on sorghum and other cereal root system improvements and provide unpublished data on the natural variation of sorghum root development.

Root-based Responses of Well-watered and Water-stressed Chickpea (Cicer arietinum L.) Genotypes Varying for Drought Tolerance and Biomass 

2021 ◽  
Author(s):  
Hayati Akman
Keyword(s):  
Drought Tolerance ◽  
Cicer Arietinum ◽  
Root Biomass ◽  
Root Traits ◽  
Grain Legume ◽  
Breeding Programs ◽  
Cicer Arietinum L ◽  
Legume Crop ◽  
Drought Tolerant ◽  
Adaptation Mechanisms

Background: Chickpea is a pivotal grain legume crop and is grown in rain-fed conditions where its production has been challenged by drought. Methods: To understand precisely the root-based responses to well-watered (WW) and water-stressed (WS) treatments, 14 chickpea (Cicer arietinum L.) genotypes differing in drought tolerance and biomass were studied in 100-cm cylinders under glasshouse conditions. Result: The genotypes exhibited significant variations in rooting depths ranging from 84.5 to 100.3 cm and 78.7 to 121 cm in WW and WS treatments, respectively and root biomasses varied from 0.23 to 1.01 g and 0.38 to 0.91 g. The average root biomass of drought-tolerant genotypes was 61.3% in WS treatment and 64.4% in WW treatment higher than that of drought-sensitive genotypes. Moreover, genotype with high biomass revealed greater root biomass and deeper rooting than the genotype with low biomass in both treatments. The root biomass in the deeper soil profile differed between drought-tolerant and drought-sensitive genotypes and was generally greater in WS compared to WW treatment. Overall, screening the variability in root features of chickpea genotypes with varying levels of drought tolerance and biomass contributes to new insights for understanding drought adaptation mechanisms and the improvement of new cultivars with superior root traits in breeding programs. 

scholarly journals Exploring Smallholder Farmers’ Preferences for Climate-Smart Seed Innovations: Empirical Evidence from Southern Ethiopia

2021 ◽  
Vol 13 (5) ◽  
pp. 2786
Author(s):  
Shimelis Araya Geda ◽  
Rainer Kühl
Keyword(s):  
Smallholder Farmers ◽  
Preference Heterogeneity ◽  
Southern Ethiopia ◽  
Significant Preference ◽  
Experiment Data ◽  
Breeding Programs ◽  
Drought Tolerant ◽  
The Face ◽  
Mnl Model ◽  
Participatory Research Methods

Rapid plant breeding is essential to overcome low productivity problems in the face of climatic challenges. Despite considerable efforts to improve breeding practices in Ethiopia, increasing varietal release does not necessarily imply that farmers have access to innovative varietal choices. Prior research did not adequately address whether varietal attributes are compatible with farmers’ preferences in harsh environmental conditions. With an agricultural policy mainly aiming to achieve productivity maximization, existing breeding programs prioritize varietal development based on yield superiority. Against this background, we estimated a multinomial logit (MNL) model based on choice-experiment data from 167 bean growers in southern Ethiopia to explore whether farmers’ attribute preferences significantly diverge from those of breeders’ priorities. Four important bean attributes identified through participatory research methods were used. The results demonstrate that farmers have a higher propensity toward drought-tolerant capability than any of the attributes considered. The model estimates further show the existence of significant preference heterogeneity across farmers. These findings provide important insight to design breeding profiles compatible with specific producer segments. We suggest demand-driven breeding innovations and dissemination strategies in order to accelerate the adoption of climate-smart and higher-yielding bean innovations that contribute to achieve the national and global sustainability goals in Ethiopia.

scholarly journals EMS Derived Wheat Mutant BIG8-1 (Triticum aestivum L.)—A New Drought Tolerant Mutant Wheat Line

2021 ◽  
Vol 22 (10) ◽  
pp. 5314
Author(s):  
Marlon-Schylor L. le Roux ◽  
Nicolas Francois V. Burger ◽  
Maré Vlok ◽  
Karl J. Kunert ◽  
Christopher A. Cullis ◽  
...  
Keyword(s):  
Amino Acids ◽  
Water Deficit ◽  
Triticum Aestivum L ◽  
Water Deficit Stress ◽  
Drought Response ◽  
Fibrous Root ◽  
Wheat Varieties ◽  
Breeding Programs ◽  
Response Characteristics ◽  
Drought Tolerant

Drought response in wheat is considered a highly complex process, since it is a multigenic trait; nevertheless, breeding programs are continuously searching for new wheat varieties with characteristics for drought tolerance. In a previous study, we demonstrated the effectiveness of a mutant known as RYNO3936 that could survive 14 days without water. In this study, we reveal another mutant known as BIG8-1 that can endure severe water deficit stress (21 days without water) with superior drought response characteristics. Phenotypically, the mutant plants had broader leaves, including a densely packed fibrous root architecture that was not visible in the WT parent plants. During mild (day 7) drought stress, the mutant could maintain its relative water content, chlorophyll content, maximum quantum yield of PSII (Fv/Fm) and stomatal conductance, with no phenotypic symptoms such as wilting or senescence despite a decrease in soil moisture content. It was only during moderate (day 14) and severe (day 21) water deficit stress that a decline in those variables was evident. Furthermore, the mutant plants also displayed a unique preservation of metabolic activity, which was confirmed by assessing the accumulation of free amino acids and increase of antioxidative enzymes (peroxidases and glutathione S-transferase). Proteome reshuffling was also observed, allowing slow degradation of essential proteins such as RuBisCO during water deficit stress. The LC-MS/MS data revealed a high abundance of proteins involved in energy and photosynthesis under well-watered conditions, particularly Serpin-Z2A and Z2B, SGT1 and Calnexin-like protein. However, after 21 days of water stress, the mutants expressed ABC transporter permeases and xylanase inhibitor protein, which are involved in the transport of amino acids and protecting cells, respectively. This study characterizes a new mutant BIG8-1 with drought-tolerant characteristics suited for breeding programs.

scholarly journals A New Breeding Strategy towards Introgression and Characterization of Stay-Green QTL for Drought Tolerance in Sorghum

Agriculture ◽  
2021 ◽  
Vol 11 (7) ◽  
pp. 598
Author(s):  
Nasrein Mohamed Kamal ◽  
Yasir Serag Alnor Gorafi ◽  
Hanan Abdeltwab ◽  
Ishtiag Abdalla ◽  
Hisashi Tsujimoto ◽  
...  
Keyword(s):  
Phenotypic Expression ◽  
Phenotypic Selection ◽  
Breeding Strategy ◽  
Stay Green ◽  
Breeding Programs ◽  
The Public ◽  
Drought Tolerant ◽  
Selection Step ◽  
The Cost

Several marker-assisted selection (MAS) or backcrossing (MAB) approaches exist for polygenic trait improvement. However, the implementation of MAB remains a challenge in many breeding programs, especially in the public sector. In MAB introgression programs, which usually do not include phenotypic selection, undesired donor traits may unexpectedly turn up regardless of how expensive and theoretically powerful a backcross scheme may be. Therefore, combining genotyping and phenotyping during selection will improve understanding of QTL interactions with the environment, especially for minor alleles that maximize the phenotypic expression of the traits. Here, we describe the introgression of stay-green QTL (Stg1–Stg4) from B35 into two sorghum backgrounds through an MAB that combines genotypic and phenotypic (C-MAB) selection during early backcross cycles. The background selection step is excluded. Since it is necessary to decrease further the cost associated with molecular marker assays, the costs of C-MAB were estimated. Lines with stay-green trait and good performance were identified at an early backcross generation, backcross two (BC2). Developed BC2F4 lines were evaluated under irrigated and drought as well as three rainfed environments varied in drought timing and severity. Under drought conditions, the mean grain yield of the most C-MAB-introgression lines was consistently higher than that of the recurrent parents. This study is one of the real applications of the successful use of C-MAB for the development of drought-tolerant sorghum lines for drought-prone areas.

scholarly journals Phenotypic and molecular characterization of a set of tropical maize inbred lines from a public breeding program in Brazil

BMC Genomics ◽  
2022 ◽  
Vol 23 (1) ◽  
Author(s):  
Sirlene Viana de Faria ◽  
Leandro Tonello Zuffo ◽  
Wemerson Mendonça Rezende ◽  
Diego Gonçalves Caixeta ◽  
Hélcio Duarte Pereira ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Population Structure ◽  
Inbred Lines ◽  
Breeding Program ◽  
Tropical Maize ◽  
Maize Breeding ◽  
Breeding Programs ◽  
The Public ◽  
Maize Inbred Lines

Abstract Background The characterization of genetic diversity and population differentiation for maize inbred lines from breeding programs is of great value in assisting breeders in maintaining and potentially increasing the rate of genetic gain. In our study, we characterized a set of 187 tropical maize inbred lines from the public breeding program of the Universidade Federal de Viçosa (UFV) in Brazil based on 18 agronomic traits and 3,083 single nucleotide polymorphisms (SNP) markers to evaluate whether this set of inbred lines represents a panel of tropical maize inbred lines for association mapping analysis and investigate the population structure and patterns of relationships among the inbred lines from UFV for better exploitation in our maize breeding program. Results Our results showed that there was large phenotypic and genotypic variation in the set of tropical maize inbred lines from the UFV maize breeding program. We also found high genetic diversity (GD = 0.34) and low pairwise kinship coefficients among the maize inbred lines (only approximately 4.00 % of the pairwise relative kinship was above 0.50) in the set of inbred lines. The LD decay distance over all ten chromosomes in the entire set of maize lines with r2 = 0.1 was 276,237 kb. Concerning the population structure, our results from the model-based STRUCTURE and principal component analysis methods distinguished the inbred lines into three subpopulations, with high consistency maintained between both results. Additionally, the clustering analysis based on phenotypic and molecular data grouped the inbred lines into 14 and 22 genetic divergence clusters, respectively. Conclusions Our results indicate that the set of tropical maize inbred lines from UFV maize breeding programs can comprise a panel of tropical maize inbred lines suitable for a genome-wide association study to dissect the variation of complex quantitative traits in maize, mainly in tropical environments. In addition, our results will be very useful for assisting us in the assignment of heterotic groups and the selection of the best parental combinations for new breeding crosses, mapping populations, mapping synthetic populations, guiding crosses that target highly heterotic and yielding hybrids, and predicting untested hybrids in the public breeding program UFV.

scholarly journals Diversity patterns and selective sweeps in a Southeast European panel of maize inbred lines as combined with two West European panels

2020 ◽  
Author(s):  
Vlatko Galić ◽  
Violeta Anđelković ◽  
Natalija Kravić ◽  
Nikola Grčić ◽  
Tatjana Ledenčan ◽  
...  
Keyword(s):  
Selective Sweep ◽  
Genetic Material ◽  
Plant Morphology ◽  
Inbred Lines ◽  
Chromosome 2 ◽  
Selective Sweeps ◽  
Phenotypic Analysis ◽  
Maize Breeding ◽  
Favorable Alleles ◽  
Diversity Patterns

AbstractMore than one third of European grain maize is produced in South Eastearn Europe (SEE) and utilization of historical maize material developed in SEE for its favorable alleles and diversity has long been speculated. However, molecular diversity of the SEE maize genetic material is scarce. The objectives of this study were i) to analyze diversity patterns in a large panel of densely genotyped historical accessions from SEE, ii) to compare the data with those obtained from other two European panels, and iii) to identify genomic regions that have undergone selection (selective sweeps) in response to adaptation to SEE conditions. 572 accessions of the historical inbred lines from Maize Research Institute Zemun Polje representing the SEE material were genotyped using the 600k maize genotyping Axiom array. The genotyping results were merged with two European panels DROPS and TUM. Genetic structure and diversity were analyzed using neighbor-joining cladogram, PcoA, Admixture, Structure and sNMF. To detect the selective sweep signals, Tajima’s D statistic and RAiSD were employed. The best number of ancestral populations was K=7, whereby one of them is a subpopulation containing inbreds belong exclusively to the SEE panel. The prevalence of inbreds linked to historical US inbred lines Wf9, Oh43, Pa91 and A374 was detected in SEE. Possible soft selective sweep was detected in chromosome 2 in region harboring a gene linked to promotion of flowering FPF1. Additional scan for selective sweeps using the RAiSD methodology yielded four signals in chromosomes 5 and 6, all in gene-rich regions. Several candidates of selection were identified, influencing the plant morphology and adaptation. Our study provides the first step towards the utilization of the SEE genetic materials for use in maize breeding. Phenotypic analysis is needed for assessment of SEE accessions for favorable alleles, and identification of breeding targets.

scholarly journals Maize gene bank collections as potentially valuable breeding material

Genetika ◽  
2010 ◽  
Vol 42 (1) ◽  
pp. 9-21 ◽  
Author(s):  
Jelena Vancetovic ◽  
Snezana Mladenovic-Drinic ◽  
Milosav Babic ◽  
Dragana Ignjatovic-Micic ◽  
Violeta Andjelkovic
Keyword(s):  
Genetic Resources ◽  
Herbicide Tolerance ◽  
Gene Bank ◽  
Maize Breeding ◽  
Breeding Programs ◽  
Effective Utilization ◽  
Maize Populations ◽  
Predominant Type ◽  
Superior Genotypes ◽  
Maize Gene

Characterization and evaluation of the genetic resources provide breeders with valuable information on an effective utilization of the genetic resources in breeding programs. In this paper we present the results of different research programs aimed at identification of superior genotypes among MRI gene bank accessions, regarding stress tolerance (drought and herbicides), better nutritional quality (phosphorus) and specific traits (cytoplasmic male sterility - CMS). Fifty-two genotypes were identified as a potential source for drought tolerance. Considering herbicide tolerance only genotypes with resistance to the Pivot were found. Within 100 sources of CMS in the collection S cytoplasm was identified as the predominant type. Phytate analysis of 60 maize populations identified three groups of populations - with low (8), intermediate (25) and high (27) phytate content. The results of these researches, which are a part of pre-breeding activities, will be included in MRI breeding programs, with the aim of developing new genotypes with improved traits important in commercial maize breeding and seed production.

Drought Response of Rice in Northeastern Thailand Assessed via Fourier Transform Infrared Spectroscopy

2021 ◽  
Vol 74 ◽  
Author(s):  
Piyaporn Phansak ◽  
Supatcharee Siriwong ◽  
Nantawan Kanawapee ◽  
Kanjana Thumanu ◽  
Wuttichai Gunnula ◽  
...  
Keyword(s):  
Fourier Transform ◽  
Drought Stress ◽  
Lignin Content ◽  
Principal Component ◽  
Fourier Transform Infrared ◽  
Breeding Programs ◽  
Treatment Groups ◽  
Drought Tolerant ◽  
Relative Water ◽  
Rice Landrace

Abstract Drought isa major constraint in many rainfed areas and affects rice yield. We aimed to characterize the physiological changes in rice in response to drought using Fourier transform infrared (FTIR) spectroscopy. Eighty rice landrace seedlings were subjected to drought in the greenhouse using a PEG 6000. Physiological parameters, including total chlorophyll content, relative water content, electrolyte leakage, and biochemical changes were evaluated. Based on the FTIR results, the landraces were divided into three main groups: tolerant, moderately tolerant, and susceptible. Principal component analysis revealed spectral differences between the control and drought stress treatment groups. Lipid, pectin, and lignin content increased after drought stress. The biochemical components of plants at different drought tolerance levels were also compared. The lipid (CH2 and CH3), lignin (C=C), pectin (C=O), and protein (C=O, N–H) contents were the highest in the drought-tolerant cultivars, followed by the moderately tolerant and susceptible cultivars, respectively. Cultivar 17 and 49 were the most tolerant, and the functional groups were identified and characterized using FTIR. Overall, these results will be useful in selecting parental cultivars for rice breeding programs.

scholarly journals Seed Quality Assurance in Maize Breeding Programs: Tests to Explain Variations in Maize Inbreds and Populations

2008 ◽  
Vol 100 (2) ◽  
pp. 337-343
Author(s):  
A. Susana Goggi ◽  
Petrutza Caragea ◽  
Linda Pollak ◽  
Gina McAndrews ◽  
Mindy DeVries ◽  
...  
Keyword(s):  
Quality Assurance ◽  
Seed Quality ◽  
Maize Breeding ◽  
Breeding Programs ◽  
Maize Inbreds
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