The Difference of Serum Protein Transport between Echinosides and Verbascoside

2020 ◽  
Vol 42 (3) ◽  
pp. 369-369
Author(s):  
Ming Guo Ming Guo ◽  
Xiaoxue Zhao Xiaoxue Zhao ◽  
Peter E Brodelius Peter E Brodelius ◽  
Ling Fang Ling Fang ◽  
Zhihong Sun and Rui Wang Zhihong Sun and Rui Wang

Verbascoside (VER) is the enzymatic hydrolysis product of echinacoside (ECH). The molecular structures of ECH and VER have different glucosyl groups so they bind to serum albumin in different ways, resulting in different pharmacological actions. In this report, we have examined the binding characteristics between human serum albumin (HSA) and ECH/VER by molecular modeling and spectroscopic approaches. Molecular modeling revealed that VER bound to HSA mainly through hydrogen bonds, van der Waals forces and hydrophobic forces. The spectroscopic results showed that the interactions between HSA and VER/ECH involved a static binding process, and the bonding strength of the VER-HSA complex was stronger than that of the ECH-HSA complex. The value of the binding distances (r) was low, which indicated the occurrence of energy transfer. The reaction conformational pattern of HSA-VER and HSA-ECH gave a “two-state model” based on fluorescent phase diagram analysis. According to the thermodynamic model, the main forces between interaction of VER and HSA were hydrogen bonds and van der Waals forces, whereas the interaction between ECH and HSA was hydrophobic force. The fluorescence polarization analysis demonstrated that the interaction between HSA and VER or ECH generated a non-covalent complex. Compared with ECH, VER was more likely to bind with HSA because of its smaller molecular size and low polarity. The results of the spectral analysis concurred with the molecular modeling data, which provides a helpful reference for the study of the molecular reaction mechanism of VER/ECH binding to HSA.

2012 ◽  
Vol 68 (6) ◽  
pp. o1884-o1884 ◽  
Author(s):  
Ísmail Çelik ◽  
Mehmet Akkurt ◽  
Makbule Yilmaz ◽  
Ahmet Tutar ◽  
Ramazan Erenler ◽  
...  

In the title compound, C11H10Br2O2, the cyclopentene ring fused to the benzene ring adopts an envelope conformation, with the C atom attached to the Br atom as the flap. The crystal structure does not exhibit any classical hydrogen bonds. The molecular packing is stabilized by van der Waals forces and π–π stacking interactions with a centroid–centroid distance of 3.811 (4) Å.


RSC Advances ◽  
2019 ◽  
Vol 9 (8) ◽  
pp. 4530-4538 ◽  
Author(s):  
Siyu He ◽  
Nan Zhang ◽  
Pu Jing

Stability of chlorophylls was improved with self-assembly of chlorophylls and NaCas nanoparticles via van der Waals forces and hydrogen bonds.


1983 ◽  
Vol 38 (9) ◽  
pp. 1054-1061 ◽  
Author(s):  
M. Veith ◽  
O. Recktenwald

Abstract Crystals of Sn4(NtBu)4 (1) are monoclinic, space group P21/c, with cell constants a = 1038.9(4), b = 1468.3(5), c = 1698.8(5) pm, β = 91.6(1)° and Z = 4, while those of Sn4(NtBu)3O (2) are triclinic, space group P 1̄, with dimensions a = 1293.0(5), b = 1027.1(5), c = 1716.7(9) pm, α = 90.9(1), β = 102.5(1), γ = 107.0(1)° and Z = 4. The molecules 1 are held together by van-der-Waals forces, whereas two molecules 2 interact in the crystal by weak 0→Sn donor bonds (290-332 pm) forming dimers. The outstanding structural elements of 1 and 2 are the Sn4N4 and Sn4N3O polyhedra, which can be described by two interpenetrating tetrahedra of tin atoms and of nitrogen or nitrogen and oxygen atoms forming a distorted cube, which approaches 4̄3 m symmetry in the case of 1 and 3m for 2. Characteristic distances are in 1: Sn-N 220.2 pm, in 2: Sn-N 221.3 pm and Sn-O 213.2 pm. An almost ionic bonding model and two covalent models are discussed on the basis of the structural data including Sn4(NtBu)3OAlMe3.


2011 ◽  
Vol 107 (18) ◽  
Author(s):  
Biswajit Santra ◽  
Jiří Klimeš ◽  
Dario Alfè ◽  
Alexandre Tkatchenko ◽  
Ben Slater ◽  
...  

2015 ◽  
Vol 71 (12) ◽  
pp. m263-m264
Author(s):  
Yaokang Lv ◽  
Mingxian Liu ◽  
Lvlv Ji ◽  
Cheng Zhang ◽  
Mi Ouyang

The asymmetric unit of the mononuclear title complex, [NiBr2(C3H8O)4], comprises a NiIIcation located on a centre of inversion, one Br−anion and two propan-2-ol ligands. The NiIIcation exhibits a distortedtrans-Br2O4environment. There are O—H...Br hydrogen bonds connecting neighbouring molecules into rows along [100]. These rows are arranged in a distorted hexagonal packing and are held together by van der Waals forces only.


Molecules ◽  
2020 ◽  
Vol 25 (23) ◽  
pp. 5691
Author(s):  
Cyprian M. Chunkang ◽  
Iris E. Ikome ◽  
Emmanuel N. Nfor ◽  
Yuta Mitani ◽  
Natsuki Katsuumi ◽  
...  

Single crystals of two achiral and planar heterocyclic compounds, C9H8H3O(CA1) and C8H5NO2 (CA4), recrystallized from ethanol, were characterized by single crystal X-ray analysis, respectively, and chiral crystallization was observed only for CA1 as P212121 (# 19), whereas it was not observed for CA4 P21/c (# 14). In CA1, as a monohydrate, the hydrogen bonds were pronounced around the water of crystallization (O4), and the planar cyclic sites were arranged in parallel to slightly tilted positions. On the other hand, an anhydride CA4 formed a dimer by hydrogen bonds between adjacent molecules in the crystal, which were aggregated by van der Waals forces and placed in parallel planar cyclic sites.


2002 ◽  
Vol 4 (2) ◽  
pp. 45-50 ◽  
Author(s):  
Jozef Hritz ◽  
Jozef Ulicny ◽  
Pavol Miskovsky

Molecular modeling has been employed to study the interaction of hypericin (Hyp) with human serum albumin (HSA). The structural model for Hyp/HSA complex is presented. Our results indicate that Hyp is bound in II A subdomain of HSA close to the tryptophan 214 (Trp214) (distance 5.12 Å between the centers of masses). In the presented model the carbonyl group of Hyp is hydrogen bonded to the Asn458. Another two candidates for hydrogen bonds have been identified between the bay-region hydroxyl group of Hyp and the carbonyl group of the Trp214 peptidic link and between the peri-region hydroxyl group of Hyp and Asn458 carbonyl group.


Author(s):  
Muzzaffar A. Bhat ◽  
Shalini Jain ◽  
Sanjay K. Srivastava ◽  
Ray J. Butcher ◽  
Jan Wikaira

In the title compound, [Na(C7H14NOS2)(H2O)2]n, the NaIcation is coordinated by five O atoms [Na—O = 2.3142 (11)–2.4677 (10) Å] from three aqua and twoN-butyl-N-(2-hydroxyethyl)dithiocarbamate (L) ligands and one S atom [Na—S = 3.0074 (6) Å] from a thirdLligand in a highly distorted octahedral geometry. Two aqua ligands related by an inversion center bridge two NaIcations, and eachLligand coordinates three NaIcations, leading to a layered arrangement aligned parallel to thebcplane. Intermolecular O—H...S hydrogen bonds are observed in the inner part of each polymeric layer; these are packed along theaaxis and held together by weak van der Waals forces.


2006 ◽  
Vol 62 (7) ◽  
pp. o2683-o2684 ◽  
Author(s):  
Jiong Jia ◽  
Xi-Zhao Wang ◽  
Yan Zhang ◽  
Jian-Wu Wang

In the title compound, C8H6F3NO, the trifluoromethyl group displays rotational disorder. The crystal packing is stabilized by intermolecular O—H...N hydrogen bonds and van der Waals forces.


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