PHYLOGENETIC RELATIONSHIPS OF SARGASSUM SUBGENUS BACTROPHYCUS (SARGASSACEAE, PHAEOPHYCEAE) INFERRED FROM RDNA ITS SEQUENCES

ALGAE ◽  
2002 ◽  
Vol 17 (4) ◽  
pp. 235-247 ◽  
Author(s):  
Young-Bae Suh
2009 ◽  
Vol 45 (6) ◽  
pp. 696-706 ◽  
Author(s):  
C. Zhang ◽  
X. Fan ◽  
H. Q. Yu ◽  
J. Zeng ◽  
H. Q. Zhang ◽  
...  

Mycoscience ◽  
1999 ◽  
Vol 40 (3) ◽  
pp. 259-268 ◽  
Author(s):  
Susumu Takamatsu ◽  
Tetsuya Hirata ◽  
Yukio Sato ◽  
Yukihiko Nomura

Biologia ◽  
2015 ◽  
Vol 70 (2) ◽  
Author(s):  
Gang Gao ◽  
Jia-bin Deng ◽  
Xue-mei Gou ◽  
Qian Wang ◽  
Chun-bang Ding ◽  
...  

AbstractTo investigate the phylogenetic relationships among Elymus and related diploid genera, the genome donor of Elymus, and the evolutionary history of polyploid Elymus species, nuclear ribosomal internal transcribed spacer (ITS) sequences were analyzed for 10 Elymus species, together with 17 diploid taxa from 5 monogenomic genera. The phylogenetic analyses (Neighbor-Joining) supported two major clades (St and H). Sequence diversity and genealogical analysis suggested that (1) Elymus species were unambiguously closely related to Pseudoroegeria; (2) Pse. stipifolia might be serve as the St genome donor of polyploid Elymus species; (3) the Y genome might be originated from ancestral lineage of Pseudoroegneria (St); (4) the ITS sequences of Elymus were evolutionarily distinct and may clarify parental lineages and phylogenetic relationships in Elymus.


2000 ◽  
Vol 57 (2) ◽  
pp. 151-156 ◽  
Author(s):  
M. MÖLLER

Phylogenetic relationships are frequently inferred from rDNA ITS sequences obtained employing universal primers. Whereas in most cases phylogenetic topologies inferred from ITS data make good biological sense, caution has to be used when a number of taxa vary greatly in PCR yield. The phylogenetic implications of such a scenario are discussed.


Sommerfeltia ◽  
2008 ◽  
Vol 31 (1) ◽  
pp. 161-177 ◽  
Author(s):  
U. Peintner

Cortinarius alpinus as an example for morphological and phylogenetic species concepts in ectomycorrhizal fungiExtensive morphological and molecular analyses of closely related species from alpine, subalpine and montane habitats should enable a comparison of ecological, morphological and phylogenetic species concepts in ectomycorrhizal mushrooms. One fundamental question of this study was whether alpine species really exist, and which criteria, besides the specific habitat, could reliably be used for the de-limitation of such taxa. For this reason, 56 rDNA ITS sequences were generated or downloaded from GenBank for 10 closely related species of Cortinarius subgenus Myxacium, section Myxacium. Several collections were sequenced for each of the following taxa: Cortinarius absarokensis, C. alpinus, C. favrei, C. fennoscandicus, C. grallipes, C. mucosus, C. muscigenus, C. septentrionalis, C. trivialis and C. vernicosus. Moreover, spore statistics were carried out for 38 collections of alpine and subalpine taxa. These data provide clear evidence for C. favrei being a synonym of C. alpinus. C. absarokensis and C. alpinus can clearly be delimited based on pileus diameter and average dry weight per basidiome, even in overlapping habitats, but spore size and shape is not a good distinguishing character. Phylograms have very short branches, and base differences between ITS sequences are generally very low in this group, and give no resolution for the included taxa of this section. Based on these results, species concepts of ectomycorrhizal mushrooms are discussed in detail.


2006 ◽  
Vol 31 (4) ◽  
pp. 764-778 ◽  
Author(s):  
Shirley A. Graham ◽  
John V. Freudenstein ◽  
Melissa Luker

Author(s):  
Chuan Gao ◽  
Fusheng Zhang ◽  
Jun Zhang ◽  
Shunxing Guo ◽  
Hongbo Shao

2006 ◽  
Vol 110 (3) ◽  
pp. 276-287 ◽  
Author(s):  
Andy F.S. Taylor ◽  
Alan E. Hills ◽  
Giampaolo Simonini ◽  
Ernst E. Both ◽  
Ursula Eberhardt

2018 ◽  
Vol 63 (2) ◽  
pp. 39-44
Author(s):  
Ravi S. Patel ◽  
Ajit M. Vasava ◽  
Kishore S. Rajput

AbstractItajahya galericulata (Phallales, Phallaceae) was previously reported from several countries in South America and Africa. Recently we found I. galericulata in the city of Vadodara, Gujarat State, India. To verify its identity we studied its morphology and performed molecular phylogenetic analyses using nuclear rDNA LSU and mitochondrial ATP6 loci. Here we also provide nuclear rDNA ITS sequences for the Indian collection, since up to now no sequences of this region have been available for I. galericulata in GenBank. This study furnishes the first evidence for the occurrence of I. galericulata in India and in Asia as a whole.


Caryologia ◽  
2014 ◽  
Vol 67 (1) ◽  
pp. 36-44 ◽  
Author(s):  
Yan-biao He ◽  
Ying-hong Liu ◽  
Ru-lin Zhan ◽  
Zai-fu Xu ◽  
Guang-ming Sun ◽  
...  

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