Development of SSR markers from Citrus clementina (Rutaceae) BAC end sequences and interspecific transferability in Citrus

2010 ◽  
Vol 97 (11) ◽  
pp. e124-e129 ◽  
Author(s):  
Frédérique Ollitrault ◽  
Javier Terol ◽  
Jose Antonio Pina ◽  
Luis Navarro ◽  
Manuel Talon ◽  
...  
Keyword(s):  
Ssr Markers ◽  
Citrus Clementina ◽  
End Sequences

Development of indel markers from Citrus clementina (Rutaceae) BAC-end sequences and interspecific transferability in Citrus

2012 ◽  
Vol 99 (7) ◽  
pp. e268-e273 ◽  
Author(s):  
F. Ollitrault ◽  
J. Terol ◽  
A. A. Martin ◽  
J. A. Pina ◽  
L. Navarro ◽  
...  
Keyword(s):  
Citrus Clementina ◽  
Indel Markers ◽  
End Sequences

scholarly journals Novel SSR Markers from BAC-End Sequences, DArT Arrays and a Comprehensive Genetic Map with 1,291 Marker Loci for Chickpea (Cicer arietinum L.)

PLoS ONE ◽  
2011 ◽  
Vol 6 (11) ◽  
pp. e27275 ◽  
Author(s):  
Mahendar Thudi ◽  
Abhishek Bohra ◽  
Spurthi N. Nayak ◽  
Nicy Varghese ◽  
Trushar M. Shah ◽  
...  
Keyword(s):  
Cicer Arietinum ◽  
Ssr Markers ◽  
Genetic Map ◽  
Cicer Arietinum L ◽  
Marker Loci ◽  
End Sequences

Exploiting BAC-end sequences for the mining, characterization and utility of new short sequences repeat (SSR) markers in Citrus

2011 ◽  
Vol 39 (5) ◽  
pp. 5373-5386 ◽  
Author(s):  
Manosh Kumar Biswas ◽  
Lijun Chai ◽  
Christoph Mayer ◽  
Qiang Xu ◽  
Wenwu Guo ◽  
...  
Keyword(s):  
Ssr Markers ◽  
End Sequences

scholarly journals Analysis of BAC-end sequences (BESs) and development of BES-SSR markers for genetic mapping and hybrid purity assessment in pigeonpea (Cajanus spp.)

2011 ◽  
Vol 11 (1) ◽  
pp. 56 ◽  
Author(s):  
Abhishek Bohra ◽  
Anuja Dubey ◽  
Rachit K Saxena ◽  
R Varma Penmetsa ◽  
KN Poornima ◽  
...  
Keyword(s):  
Genetic Mapping ◽  
Ssr Markers ◽  
Purity Assessment ◽  
Hybrid Purity ◽  
End Sequences

Application of SSR Technique for the Identification of Markers Linked to Salinity Tolerance in Rice

2013 ◽  
Vol 19 (2) ◽  
pp. 57-65
Author(s):  
MH Kabir ◽  
MM Islam ◽  
SN Begum ◽  
AC Manidas
Keyword(s):  
Salt Tolerance ◽  
Ssr Markers ◽  
Salinity Tolerance ◽  
Seedling Stage ◽  
Phenotypic Screening ◽  
Salt Tolerant ◽  
Marker Assisted Breeding ◽  
Hydroponic System ◽  
Rice Landrace ◽  
Salt Susceptible

A cross was made between high yielding salt susceptible BINA variety (Binadhan-5) with salt tolerant rice landrace (Harkuch) to identify salt tolerant rice lines. Thirty six F3 rice lines of Binadhan-5 x Harkuch were tested for salinity tolerance at the seedling stage in hydroponic system using nutrient solution. In F3 population, six lines were found as salt tolerant and 10 lines were moderately tolerant based on phenotypic screening at the seedling stage. Twelve SSR markers were used for parental survey and among them three polymorphic SSR markers viz., OSR34, RM443 and RM169 were selected to evaluate 26 F3 rice lines for salt tolerance. With respect to marker OSR34, 15 lines were identified as salt tolerant, 9 lines were susceptible and 2 lines were heterozygous. While RM443 identified 3 tolerant, 14 susceptible and 9 heterozygous rice lines. Eight tolerant, 11 susceptible and 7 heterozygous lines were identified with the marker RM169. Thus the tested markers could be efficiently used for tagging salt tolerant genes in marker-assisted breeding programme.DOI: http://dx.doi.org/10.3329/pa.v19i2.16929 Progress. Agric. 19(2): 57 - 65, 2008

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