scholarly journals Prevalence of Orthohantavirus-Reactive Antibodies in Humans and Peri-Domestic Rodents in Northern Ethiopia

Viruses ◽  
2021 ◽  
Vol 13 (6) ◽  
pp. 1054
Author(s):  
Yonas Meheretu ◽  
Åsa Granberg ◽  
Gebregiorgis Berhane ◽  
Hussein Khalil ◽  
Olivia Wesula Lwande ◽  
...  
Keyword(s):  
Small Mammals ◽  
Small Mammal ◽  
Immunofluorescence Assay ◽  
Northern Ethiopia ◽  
Natural Habitats ◽  
Blood Samples ◽  
Virus Rna ◽  
Close Proximity ◽  
Seasonal Infection ◽  
Low Prevalence

In 2012, Tigray orthohantavirus was discovered in Ethiopia, but its seasonal infection in small mammals, and whether it poses a risk to humans was unknown. The occurrence of small mammals, rodents and shrews, in human inhabitations in northern Ethiopia is affected by season and presence of stone bunds. We sampled small mammals in two seasons from low- and high-density stone bund fields adjacent to houses and community-protected semi-natural habitats in Atsbi and Hagere Selam, where Tigray orthohantavirus was first discovered. We collected blood samples from both small mammals and residents using filter paper. The presence of orthohantavirus-reactive antibodies in blood was then analyzed using immunofluorescence assay (human samples) and enzyme linked immunosorbent assays (small mammal samples) with Puumala orthohantavirus as antigen. Viral RNA was detected by RT-PCR using small mammal blood samples. Total orthohantavirus prevalence (antibodies or virus RNA) in the small mammals was 3.37%. The positive animals were three Stenocephalemys albipes rats (prevalence in this species = 13.04%). The low prevalence made it impossible to determine whether season and stone bunds were associated with orthohantavirus prevalence in the small mammals. In humans, we report the first detection of orthohantavirus-reactive IgG antibodies in Ethiopia (seroprevalence = 5.26%). S. albipes lives in close proximity to humans, likely increasing the risk of zoonotic transmission.

scholarly journals 1648. Prevalence of Orientia tsutsugamushi, Anaplasma phagocytophilum, and Leptospira interrogans in Striped Field Mice in Gwangju, Republic of Korea

2019 ◽  
Vol 6 (Supplement_2) ◽  
pp. S602-S603
Author(s):  
Dong-Min Kim ◽  
Mi Seon Bang ◽  
Choon-Mee Kim ◽  
Na Ra Yun ◽  
Jun-won Seo
Keyword(s):  
Anaplasma Phagocytophilum ◽  
Immunofluorescence Assay ◽  
Republic Of Korea ◽  
Leptospira Interrogans ◽  
Orientia Tsutsugamushi ◽  
Wild Rodents ◽  
Passive Hemagglutination ◽  
Blood Samples ◽  
Suburban Areas ◽  
Close Proximity

Abstract Background Scrub typhus, anaplasmosis, and leptospirosis are well-known diseases that are considered common, widespread rodent-borne infectious diseases Methods This study investigated the prevalence of Orientia tsutsugamushi, Anaplasma phagocytophilum, and Leptospira interrogans in wild rodents through molecular detection using organ samples and through serological assay using blood samples of mice collected from two distinct sites in Gwangju Metropolitan City, Republic of Korea (ROK). Results A total of 47 wild rodents, identified as Apodemus agrarius (A. agrarius), were captured from June to August 2016. The seroprevalence of antibodies against bacterial pathogens in A. agrarius sera was analyzed; 17.4% (8/46) were identified as O. tsutsugamushi through indirect immunofluorescence assay and 2.2% (1/46) were identified as Leptospira species through passive hemagglutination assay. Using polymerase chain reaction, the spleen, kidney and blood samples were investigated for the presence of O. tsutsugamushi, A. phagocytophilum, and L. interrogans. Out of the 47 A. agrarius, 19.1% (9/47) were positive for A. phagocytophilum and 6.4% (3/47) were positive for L. interrogans, while none were positive for O. tsutsugamushi. Four out of 46 (8.7%) blood samples, six out of 45 (13.3%) spleen samples, and one out of 47 (2.1%) kidney samples were positive for A. phagocytophilum. Three out of 47 (6.4%) kidney samples were positive for L. interrogans. The sequencing results of PCR positive samples demonstrated >99% similarity with A. phagocytophilum and L. interrogans sequences Conclusion A. phagocytophilum was mostly detected in the spleen, whereas L. interrogans was mostly detected in the kidneys. Notably, A. phagocytophilum and L. interrogans were detected in A. agrarius living in close proximity to humans in the metropolitan suburbans. The results of this study indicate that rodent-borne bacteria may be present in wild rodents in the metropolitan suburban areas of ROK Disclosures All authors: No reported disclosures.

scholarly journals Environmental Assessment at the Bakhuis Bauxite Concession: Small- Sized Mammal Diversity and Abundance in the Lowland Humid Forests of Suriname

2009 ◽  
Vol 2 (1) ◽  
pp. 42-53 ◽  
Author(s):  
Burton K. Lim
Keyword(s):  
Small Mammals ◽  
Relative Abundance ◽  
Small Mammal ◽  
Social Impact ◽  
Climatic Conditions ◽  
Wet Season ◽  
Natural Habitats ◽  
Small Areas ◽  
Study Sites ◽  
Molossus Molossus

A small mammal survey was conducted in the Bakhuis Mountains of western Suriname in South America as part of a larger environmental and social impact assessment for a proposed bauxite mining concession. The objectives were to establish a baseline study of species diversity and relative abundance for comparison of seasonality, areas, and habitats to facilitate the identification and monitoring of potential impacts of mining to the environment. There were 83 species of small mammals documented comprising 68 species of bats, 8 species of rats and mice, and 7 species of opossums. The most abundant bat was the Seba’s short-tailed bat, Carollia perspicillata Linnaeus, which was recorded at all six study sites. The most abundant non-volant small mammal was the Guianan spiny rat, Proechimys guyannensis E. Geoffroy. Noteworthy discoveries during the survey include the documentation of four species of bats new to the fauna of Suriname (Cyttarops alecto Thomas, smoky sheath-tailed bat; Saccopteryx gymnura Thomas; least two-lined sac-winged bat; Diaemus youngi Jentink; bird-feeding vampire bat; and Lasiurus egregius Peters, greater red bat). There were no obvious differences between the dry and wet season samplings that were attributable directly to climatic conditions. In terms of spatial variation, the relative abundance of bats among the five study sites within the concession area was similar to each other, but significantly different from a sixth study site at a nearby ecotourism operation, which had large numbers of three species (C. perspicillata; Molossus molossus, common free-tailed bat; and Sturnira lilium, little yellowshouldered bat) that are better adapted to human modified surroundings. This suggests that the recent mining explorations in Bakhuis have had a relatively minor impact on bats and that the otherwise pristine forests within the concession can tolerate low levels of disturbance in proportionally small areas over a short duration. For specific habitats, the xeric forest on plateaus had a reduced subset of species of small mammals that were found in the mesic forest of the surrounding lowland regions, which was acting as a species reservoir for upland areas. Small mammals, in particular bats as primary seed dispersers and flower pollinators, are important components of the ecosystem for the successful reforestation of natural habitats, and factors related to community structure are good indicators of the health of the environment.

scholarly journals Serologic evidence of the exposure of small mammals to spotted-fever Rickettsia and Rickettsia bellii in Minas Gerais, Brazil

2016 ◽  
Vol 10 (03) ◽  
pp. 275-282 ◽  
Author(s):  
Marcella Gonçalves Coelho ◽  
Vanessa do Nascimento Ramos ◽  
Jean Ezequiel Limongi ◽  
Elba Regina Sampaio De Lemos ◽  
Alexandro Guterres ◽  
...  
Keyword(s):  
Small Mammals ◽  
Small Mammal ◽  
Urban Areas ◽  
Spotted Fever ◽  
Immunofluorescence Assay ◽  
Spotted Fever Group ◽  
Spotted Fever Group Rickettsia ◽  
Tick Vectors ◽  
Rickettsia Bellii ◽  
First Time

Introduction: Sources of pathogenic Rickettsia in wildlife are largely unknown in Brazil. In this work, potential tick vectors and seroreactivity of small mammals against four spotted-fever group Rickettsia (R. rickettsii, R. parkeri, R. amblyommii and R. rhipicephali) and Rickettsia bellii from peri-urban areas of Uberlândia, a major town in Brazil, are described for the first time. Methodology: Small mammals were captured and blood samples collected. Ticks were collected from the surface of the host and the environment and posteriorly identified. Reactivity of small mammal sera to Rickettsia was tested by indirect immunofluorescence assay (IFA) using crude antigens from five Brazilian Rickettsia isolates. Results: Information was obtained from 416 small mammals (48 Marsupialia and 368 Rodentia). Forty-eight animals were parasitized and two tick species, Ixodes loricatus and Amblyomma dubitatum, were found on several host species, with a few tick-host relationships described for the first time. From the 416 tested sera, 70 reacted to at least one Rickettsia antigen (prevalence of 16.8%) and from these, 19 (27.1%) reacted to two or more antigens. Seroprevalence was higher for marsupials (39.6%) than for rodents (13.8%). Marsupial and Rhipidomys spp. sera reacted mainly (highest seroprevalence and titers) to R. bellii, and that of Necromys lasiurus mainly to R. rickettsii. Conclusions: Although the serologic assays poorly discriminate between closely related spotted-fever group Rickettsia, the observed small mammal seroreactivity suggests the circulation of Rickettsia in the peri-urban area of Uberlândia, albeit at low levels.

scholarly journals BABESIA INFECTION OF SMALL MAMMALS FROM SOUTHERN TAIGA OF OMSK REGION

2016 ◽  
Vol 1 (1) ◽  
pp. 59-64
Author(s):  
Боброва ◽  
Oksana Bobrova ◽  
Танцев ◽  
Aleksey Tantsev ◽  
Епихина ◽  
...  
Keyword(s):  
Small Mammals ◽  
Small Mammal ◽  
Nested Pcr ◽  
Southern Taiga ◽  
Babesia Microti ◽  
Ixodes Persulcatus ◽  
Blood Samples ◽  
Genetic Groups ◽  
Tamias Sibiricus ◽  
Babesia Spp

Blood samples were taken from 541 small mammal captured in 2013–2015 in Znamensky district of Omsk region from Ixodes persulcatus and Ixodes trianguliceps sympatric area and examined for the Babesia spp. presence by nested PCR with subsequent sequencing of positive samples. Babesia microti DNA was found in 31,1 % of positive samples; a proportion of infected mammals varied from 5,3 % to 61,6 % in different sampling periods. B. microti DNA was found in samples from three prevailing Myodes species as well as from a root vole (Microtus oeconomus), field voles (Microtus argestis) and Siberian chipmunks (Tamias sibiricus). It was shown that identified B. microti samples belong to two genetic groups: B. microti ‘US’-type and B. microti ‘Munich’-type; notably that > 90 % infected mammals contained DNA of nonpathogenic for human B. microti ‘Munich’-type. We suppose that I. trianguliceps tick is the most probable vector of B. microti ‘Munich’-type.

Understory use by terrestrial small mammals in an unflooded forest patch in the Pantanal floodplain

Mammalia ◽  
2020 ◽  
Vol 0 (0) ◽  
Author(s):  
Nayara Yoshie Sano ◽  
Heitor Miraglia Herrera ◽  
Grasiela Edith de Oliveira Porfirio ◽  
Filipe Martins Santos
Keyword(s):  
Small Mammals ◽  
Small Mammal ◽  
Understory Vegetation ◽  
Monodelphis Domestica ◽  
Forest Patch ◽  
Habitat Features ◽  
Species Characteristics ◽  
Local Habitat

AbstractTo date, there have been no studies that have evaluated small mammal utilization of the understory of forests. In this study, we described the use of vertical strata by small mammals in patches of unflooded forests, known as “cordilheiras”, in the Nhecolândia sub-region of the Pantanal, Brazil. We collected all species using the ground and understory, including the terrestrial didelphid Monodelphis domestica. We suppose that local habitat features (e.g., Acuri palms), rather than intrinsic species characteristics, may be more conducive to the use of understory vegetation by small mammals in the Nhecolândia region.

scholarly journals Diversity and Diet Differences of Small Mammals in Commensal Habitats

Diversity ◽  
2021 ◽  
Vol 13 (8) ◽  
pp. 346
Author(s):  
Linas Balčiauskas ◽  
Laima Balčiauskienė ◽  
Andrius Garbaras ◽  
Vitalijus Stirkė
Keyword(s):  
Small Mammals ◽  
Small Mammal ◽  
Trophic Ecology ◽  
Mammal Species ◽  
Additional Food ◽  
Δ13c And Δ15n ◽  
Degree Of Separation ◽  
Kitchen Gardens ◽  
Dietary Plasticity ◽  
The Stability

The stability of diversity of syntopic (inhabiting the same habitat in the same time) small mammals in commensal habitats, such as farmsteads and kitchen gardens, and, as a proxy of their diet, their isotopic niches, was investigated in Lithuania in 2019–2020. We tested whether the separation of species corresponds to the trophic guilds, whether their diets are related to possibilities of getting additional food from humans, and whether their diets are subject to seasonal trends. We analyzed diversity, dominance and distribution of hair δ13C and δ15N values. Diversity and dominance was not stable and differed according to human influence. The highest small mammal species richness occurred in commensal habitats that provided additional food. The degree of separation of species was higher in homestead habitats than in kitchen gardens, where a 1.27 to 35.97% overlap of isotopic niches was observed between pairs of species. Temporal changes in δ13C and δ15N values in the hair of the mammals were not equally expressed in different species. The isotopic overlap may depend on dietary plasticity, minimizing interspecific competition and allowing co-existence of syntopic species. Thus, small mammal trophic ecology is likely related to intensity of agricultural activities in the limited space of commensal habitats.

Small mammal mycophagy in hemiboreal forest communities of Lithuania

2011 ◽  
Vol 6 (3) ◽  
pp. 446-456 ◽  
Author(s):  
Marija Kataržytė ◽  
Ernestas Kutorga
Keyword(s):  
Small Mammals ◽  
Small Mammal ◽  
Fungal Spores ◽  
Seasonal Effects ◽  
Deciduous Tree ◽  
Myodes Glareolus ◽  
Mammal Species ◽  
Hypogeous Fungi ◽  
Fecal Samples ◽  
Significant Difference

AbstractThe diets of small mammals in different hemiboreal spruce-dominated, oak-dominated and mixed forests in western part of Lithuania were studied by examination of fungal spores in fresh fecal pellets of caught animals. In the diets of mice (Apodemus spp.), bank voles (Myodes glareolus), and common and pygmy shrews (Sorex araneus and S. minutus), 22 different fungal taxa were identified, 15 of which were hypogeous fungi. The sporocarp abundance and the spores in fecal samples of Elaphomyces fungi prevailed in study area during this investigation. Although most of the captured individuals consumed fungi, the consumption varied among small mammal species. The data show that the fungi were more frequent and taxonomically diverse in Myodes glareolus than in Apodemus spp. diets. The study provided evidence that the fungal component in the diets of insectivorous Sorex species is more diverse than previously known. The availability of sporocarps and the fungal component in the diets of small mammals showed seasonal effects. Annual hypogeous and epigeous sporocarp abundances did not vary significantly across forest types. The significant difference in mycophagy was observed across all forest cover types, with the greatest fungal diversity in fecal samples collected in mixed coniferous-deciduous tree stands.

An attempt to determine the size of the Common Barn-owl’s (Tyto alba) hunting area based on its prey composition

2021 ◽  
pp. 175815592110660
Author(s):  
Jenő J Purger ◽  
Dávid Szép
Keyword(s):  
Functional Groups ◽  
Small Mammals ◽  
Small Mammal ◽  
Barn Owl ◽  
Tyto Alba ◽  
Mammal Species ◽  
Open Forest ◽  
Prey Composition ◽  
Small Mammal Species ◽  
Owl Pellets

The relative abundance of small mammal species detected from Common Barn-owl pellets reflects the landscape structure and habitat pattern of the owl’s hunting area, but it is also affected by the size of the collected pellet sample and the size of the supposed hunting area. The questions arise: how many pellets should be collected and analyzed as well as how large hunting area should be taken into consideration in order to reach the best correspondence between the owl’s prey composition and the distribution of habitats preferred by small mammals preyed in supposed hunting areas? For this study, we collected 1045 Common Barn-owl pellets in a village in southern Hungary. All detected small mammal species were classified into functional groups (guilds) preferring urban, open, forest and wetland habitats. The proportion of functional groups was compared to the proportion of these habitats around the pellet collection site within circles of one, two, and three km radius. Saturation curves showed that at least 300 pellets or ca. 600 mammalian remains are required for the detection of the 19 small mammal species. The share of small mammals detected in the prey and their functional groups according to their habitat preference showed an increasing consistency with the distribution of real habitats in the potential hunting area of a radius of 3 km around the owl’s breeding or resting place.

Changes in small mammal communities after logging in north-central Ontario

1983 ◽  
Vol 61 (5) ◽  
pp. 970-980 ◽  
Author(s):  
Arthur M. Martell
Keyword(s):  
Small Mammals ◽  
Small Mammal ◽  
Vegetative Cover ◽  
North Central ◽  
Clear Cut ◽  
Clear Cutting ◽  
Small Mammal Community ◽  
Small Mammal Communities ◽  
Mammal Community ◽  
Mammal Communities

Changes in small mammal communities following logging were monitored in clear-cut and strip-cut upland black spruce (Picea mariana) stands and in selectively cut mixed wood stands in north-central Ontario. Clear-cutting and subsequent scarification essentially eliminated the vegetative cover. Much of the ground cover recovered within 5 years and shrubs within 12 years, but mosses and lichens took much longer. The small mammal community in both clear-cut and strip-cut stands changed over the first three years after logging from one dominated by southern red-backed voles (Clethrionomys gapperi) to one dominated by deer mice (Peromyscus maniculatus) and then remained relatively stable for up to 13 years after harvest. That shift was not apparent in selectively cut mixed wood stands where the composition of the small mammal community was similar between uncut stands and stands 4–23 years after harvest. There was relatively little change in total numbers of small mammals after logging. In general, the diversity and evenness of small mammals increased or remained stable in the first 1–3 years following harvest, decreased on older (3–16 years) cuts, and then increased to values similar to those in uncut stands on the oldest (19–23 years) cuts.

On Small Mammal Remains in Archaeological Context

1982 ◽  
Vol 47 (4) ◽  
pp. 822-829 ◽  
Author(s):  
Peter W. Stahl
Keyword(s):  
Small Mammals ◽  
Small Mammal ◽  
Live Weight ◽  
High Ratio ◽  
Great Abundance ◽  
Prehistoric Diet

Analysis of the dissected remains of certain small mammals suggests a consistently high ratio of edible meat to live weight. These figures, together with the great abundance of small mammals in natural and culturally modified settings, are combined to support the argument that they may have been important elements in prehistoric diet. Their dietary status may be consistently underestimated because of a number of biases.

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