scholarly journals Transcriptome Profiling of Potato (Solanum tuberosum L.) Responses to Root-Knot Nematode (Meloidogyne javanica) Infestation during A Compatible Interaction

2020 ◽  
Vol 8 (9) ◽  
pp. 1443
Author(s):  
Teresia N. Macharia ◽  
Daniel Bellieny-Rabelo ◽  
Lucy N. Moleleki
Keyword(s):  
Solanum Tuberosum ◽  
Transcriptome Profiling ◽  
Meloidogyne Javanica ◽  
Physiological Adaptation ◽  
Post Inoculation ◽  
Disease Development ◽  
Compatible Interaction ◽  
Root Knot Nematode ◽  
Transcriptional Responses ◽  
Down Regulation

Root-knot nematode (RKN) Meloidogyne javanica presents a great challenge to Solanaceae crops, including potato. In this study, we investigated transcriptional responses of potato roots during a compatible interaction with M. javanica. In this respect, differential gene expression of Solanum tuberosum cultivar (cv.) Mondial challenged with M. javanica at 0, 3 and 7 days post-inoculation (dpi) was profiled. In total, 4948 and 4484 genes were detected, respectively, as differentially expressed genes (DEGs) at 3 and 7 dpi. Functional annotation revealed that genes associated with metabolic processes were enriched, suggesting they might have an important role in M. javanica disease development. MapMan analysis revealed down-regulation of genes associated with pathogen perception and signaling suggesting interference with plant immunity system. Notably, delayed activation of pathogenesis-related genes, down-regulation of disease resistance genes, and activation of host antioxidant system contributed to a susceptible response. Nematode infestation suppressed ethylene (ET) and jasmonic acid (JA) signaling pathway hindering JA/ET responsive genes associated with defense. Genes related to cell wall modification were differentially regulated while transport-related genes were up-regulated, facilitating the formation of nematode feeding sites (NFSs). Several families of transcription factors (TFs) were differentially regulated by M. javanica infestation. Suggesting that TFs play an indispensable role in physiological adaptation for successful M. javanica disease development. This genome-wide analysis reveals the molecular regulatory networks in potato roots which are potentially manipulated by M. javanica. Being the first study analyzing transcriptome profiling of M. javanica-diseased potato, it provides unparalleled insight into the mechanism underlying disease development.

scholarly journals Transcriptional profiling of potato (Solanum tuberosum L.) during a compatible interaction with the root-knot nematode, Meloidogyne javanica

2019 ◽  
Author(s):  
Teresia Nyambura Macharia ◽  
Daniel Bellieny-Rabelo ◽  
Lucy Novungayo Moleleki
Keyword(s):  
Solanum Tuberosum ◽  
Expression Profiles ◽  
Meloidogyne Javanica ◽  
Nematode Infection ◽  
Transcriptional Level ◽  
Post Inoculation ◽  
Disease Development ◽  
Compatible Interaction ◽  
Root Knot Nematode ◽  
Down Regulation

AbstractRoot-knot nematode (RKN, Meloidogyne javanica) presents a great challenge to Solanaceae crops, including the potato. In this report, we conducted an investigation to understand the transcriptional regulation of molecular responses in potato roots during a compatible interaction following RKN infection. In this study, analysis of gene expression profiles using RNA-seq of Solanum tuberosum cv Mondial with RKN interaction at 0, 3- and 7-days post-inoculation (dpi). In total, 4,948 and 4,484 genes were respectively detected as differentially expressed genes (DEGs) at 3 and 7 dpi. Functional annotation revealed that genes associated with metabolic process were enriched at the transcriptional level suggesting they have an important role in RKN disease development. Nematode infection caused down-regulation of 282 genes associated with pathogen perception hence interfering with activation plant immune system. Further, late activation of pathogenesis-related genes, down-regulation disease resistance genes and activation of host antioxidant system contributed to a susceptible response. Activation of Jasmonic acid (JA) pathway and protease inhibitors was due to wounding during nematode migration and feeding. Nematode infection suppressed ethylene (ET) and salicylic acid (SA) signalling pathway hindering SA/ET responsive genes involved with defense. Induction of auxin biosynthesis genes, regulation of cytokinin levels and up-regulation of transporter genes facilitated of nematode feeding sites (NFSs) initiation. The regulation of several families of transcription factors (TFs) in the plant, such as WRKY, GRAS, ERF BHLH and MYB, was affected by RKN infection disrupting plant defense signalling pathways. This clearly suggest that TFs played an indispensable role in physiological adaptation for successful RKN disease development. This genome-wide analysis revealed the molecular regulatory networks in potato roots which are successfully manipulated by RKN. Being the first study analysing transcriptome profiling of RKN diseased potato, it will provide unparalleled insight into the mechanism underlying disease development.

scholarly journals A Comprehensive Transcriptional Profiling of Pepper Responses to Root-Knot Nematode

Genes ◽  
2020 ◽  
Vol 11 (12) ◽  
pp. 1507
Author(s):  
Weiming Hu ◽  
Krista Kingsbury ◽  
Shova Mishra ◽  
Peter DiGennaro
Keyword(s):  
Transcriptional Profiling ◽  
Genetic Resistance ◽  
Nematode Resistance ◽  
Plant Responses ◽  
Post Inoculation ◽  
Susceptible Cultivar ◽  
Root Knot Nematode ◽  
Transcriptional Responses ◽  
Breeding Programs ◽  
Feeding Site

Genetic resistance remains a key component in integrated pest management systems. The cosmopolitan root-knot nematode (RKN; Meloidogyne spp.) proves a significant management challenge as virulence and pathogenicity vary among and within species. RKN greatly reduces commercial bell pepper yield, and breeding programs continuously develop cultivars to emerging nematode threats. However, there is a lack of knowledge concerning the nature and forms of nematode resistance. Defining how resistant and susceptible pepper cultivars mount defenses against RKN attacks can help inform breeding programs. Here, we characterized the transcriptional responses of the highly related resistant (Charleston Belle) and susceptible (Keystone Resistance Giant) pepper cultivars throughout early nematode infection stages. Comprehensive transcriptomic sequencing of resistant and susceptible cultivar roots with or without Meloidogyneincognita infection over three-time points; covering early penetration (1-day), through feeding site maintenance (7-days post-inoculation), produced > 300 million high quality reads. Close examination of chromosome P9, on which nematode resistance hotspots are located, showed more differentially expressed genes were upregulated in resistant cultivar at day 1 when compared to the susceptible cultivar. Our comprehensive approach to transcriptomic profiling of pepper resistance revealed novel insights into how RKN causes disease and the plant responses mounted to counter nematode attack. This work broadens the definition of resistance from a single loci concept to a more complex array of interrelated pathways. Focus on these pathways in breeding programs may provide more sustainable and enduring forms of resistance.

scholarly journals Mineral composition of beetroot treated with potential elicitors and inoculated with Meloidogyne javanica

2020 ◽  
Vol 7 (1) ◽  
Author(s):  
Paula Juliana Grotto Débia ◽  
Beatriz Cervejeira Bolanho ◽  
Claudia Regina Dias-Arieira
Keyword(s):  
Population Density ◽  
Mineral Composition ◽  
Integrated Management ◽  
Meloidogyne Javanica ◽  
Nematode Population ◽  
Root Knot Nematode ◽  
Cu Content ◽  
Manganese Zinc ◽  
Nematode Population Density ◽  
Elicitor Treatments

Abstract Background The root-knot nematode Meloidogyne javanica can infect beetroots, causing extensive damage to this food crop. As chemical and genetic control tactics have shown limited efficacy, new strategies are needed to improve the integrated management of this parasite. This study assessed the influence of potential defence elicitors and M. javanica infection on the mineral composition of beetroot. Plants were treated with acibenzolar-S-methyl (ASM), citrus biomass, or a mannanoligosaccharide-based product (MOS) and inoculated with 1000 eggs and second-stage juveniles of M. javanica. At 60 days after inoculation, beetroot plants were harvested and evaluated for nematode population density, vegetative growth, and mineral content. Results All potential elicitors reduced nematode population density in beetroots (p ≤ 0.10) and improved the vegetative parameters of inoculated plants (p ≤ 0.05), except shoot fresh weight. Some minerals were found to be negatively affected by treatments, particularly calcium, whose levels were consistently lower in treated plants. On the other hand, M. javanica inoculation increased magnesium, iron, manganese, zinc, and copper contents in beetroots. However, the latter mineral (Cu content) of inoculated plants was positively influenced by MOS and ASM. Conclusion Potential elicitor treatments did not improve the mineral composition of beetroot, but were effective in reducing nematode population density. Plants inoculated with M. javanica had higher mineral levels. However, gall formation decreases the commercial value of the crop and might render it unsuitable for commercialisation. M. javanica-infected beetroots may be used for nutrient extraction or sold to food processing industries.

The effect of organic compost of Caryocar brasiliense waste against Meloidogyne javanica in two vegetable crops

Nematology ◽  
2021 ◽  
pp. 1-8
Author(s):  
Fabíola de J. Silva ◽  
Regina C.F. Ribeiro ◽  
Adelica A. Xavier ◽  
Vanessa A. Gomes ◽  
Paulo V.M. Pacheco ◽  
...  
Keyword(s):  
Integrated Control ◽  
Meloidogyne Javanica ◽  
Control Measures ◽  
Vegetable Crops ◽  
Root Knot Nematode ◽  
Second Stage ◽  
Tomato Roots ◽  
Crop Development ◽  
Caryocar Brasiliense ◽  
Organic Compost

Summary Root-knot nematodes (Meloidogyne spp.) are responsible for various significant crop losses, which require taking integrated control measures. The present study aimed to identify a possible sustainable approach to the management of Meloidogyne javanica in vegetable crops using an organic compound based on pequi (Caryocar brasiliense) fruit residues. A pot experiment was conducted using cultivars of tomato and lettuce susceptible to M. javanica, with three amendments including inorganic fertiliser, cattle manure and five doses of organic compost with pequi residues. All treatments were inoculated with second-stage juveniles of M. javanica to simulate the root-knot nematode disease in field conditions. Increasing doses of organic compost with pequi residues from 5 kg m−3 to 30 kg m−3 promoted a significant decrease in the nematode population in both cultures evaluated. Organic compost (30 kg m−3) reduced the numbers of galls and eggs of M. javanica by 41.6 and 46.5% in tomato roots, and by 80.3 and 59.2% in lettuce roots, respectively, compared with non-treated control. Organic compost also increased crop development considerably. In general, there was a 43.0% increase in plant development compared to non-treated control. Hence, organic compost of pequi residues could be an alternative to toxic chemical nematicides and recommended as eco-friendly management of M. javanica in vegetable crops.

scholarly journals First record of infection of Papaya trees with root-knot nematode (Meloidogyne javanica) in Australia

2008 ◽  
Vol 3 (1) ◽  
pp. 87 ◽  
Author(s):  
Modika R. Perera ◽  
Ruben D. Flores-Vargas ◽  
Michael G. K. Jones
Keyword(s):  
Meloidogyne Javanica ◽  
First Record ◽  
Root Knot Nematode

scholarly journals Transcriptomic analysis of resistant and susceptible responses in a new model root-knot nematode infection system using Solanum torvum and Meloidogyne arenaria

2021 ◽  
Author(s):  
Kazuki Sato ◽  
Taketo Uehara ◽  
Julia Holbein ◽  
Yuko Sasaki-Sekimoto ◽  
Pamela Gan ◽  
...  
Keyword(s):  
Nematode Infection ◽  
Plant Genome ◽  
Root Tip ◽  
Post Inoculation ◽  
Sequencing Analysis ◽  
Class Iii ◽  
Root Knot Nematode ◽  
Cell Wall Modification ◽  
Solanum Torvum

ABSTRACTRoot-knot nematodes (RKNs) are among the most devastating pests in agriculture. Solanum torvum Sw. (turkey berry) has been used as a rootstock for eggplant (aubergine) cultivation because of its resistance to RKNs, including Meloidogyne incognita and M. arenaria. We previously found that a pathotype of M. arenaria, A2-J, is able to infect and propagate in S. torvum. In vitro infection assays showed that S. torvum induces the accumulation of brown pigments during avirulent pathotype A2-O infection, but not during virulent A2-J infection. This experimental system is advantageous because resistant and susceptible responses can be distinguished within a few days, and because a single plant genome can yield information about both resistant and susceptible responses. Comparative RNA-sequencing analysis of S. torvum inoculated with A2-J and A2-O at early stages of infection was used to parse the specific resistance and susceptible responses. Infection with A2-J did not induce statistically significant changes in gene expression within one day post-inoculation (DPI), but afterward, A2-J specifically induced the expression of chalcone synthase, spermidine synthase, and genes related to cell wall modification and transmembrane transport. Infection with A2-O rapidly induced the expression of genes encoding class III peroxidases, sesquiterpene synthases, and fatty acid desaturases at 1 DPI, followed by genes involved in defense, hormone signaling, and the biosynthesis of lignin at 3 DPI. Both isolates induced the expression of suberin biosynthetic genes, which may be triggered by wounding during nematode infection. Histochemical analysis revealed that A2-O, but not A2-J, induced lignin accumulation at the root tip, suggesting that physical reinforcement of cell walls with lignin is an important defense response against nematodes. The S. torvum-RKN system can provide a molecular basis for understanding plant-nematode interactions.

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