scholarly journals Distance from the Forest Edge Influences Soil Fungal Communities Colonizing a Reclaimed Soil Borrow Site in Boreal Mixedwood Forest

Forests ◽  
2020 ◽  
Vol 11 (4) ◽  
pp. 427 ◽  
Author(s):  
Tod Ramsfield ◽  
Philip-Edouard Shay ◽  
Tony Trofymow ◽  
Colin Myrholm ◽  
Bradley Tomm ◽  
...  
Keyword(s):  
Ectomycorrhizal Fungi ◽  
Arbuscular Mycorrhizae ◽  
Plant Pathogens ◽  
Forest Edge ◽  
Natural Forest ◽  
Fungal Communities ◽  
Saprotrophic Fungi ◽  
Reclaimed Soil ◽  
Undisturbed Forest ◽  
Mineral Soils

Soil fungi are important components of boreal forest ecosystems; for example, saprotrophic fungi regulate nutrient cycling, and mycorrhizal species facilitate nutrient uptake by plants. This study aimed to assess soil fungal communities in a reclaimed area and an adjacent natural mixedwood forest and to identify the distribution of taxa available for seedling colonization. Soil fungal microbiomes were assessed along three transects (from 10 m inside the interior of the undisturbed forest to 40 m inside the reclaimed area) and in the roots of small aspen within the natural forest. Using high-throughput deoxyribonucleic acid (DNA) sequencing of internal transcribed spacer amplicons, a total of 2796 unique fungal taxa were detected across fine roots, forest floor, and mineral soils collected along the transects, whereas 166 taxa were detected in the aspen roots from the natural forest. Within the interior of the forest, ectomycorrhizal fungi were more common, whereas in the reclaimed areas, arbuscular mycorrhizae and saprophytes were more common. This survey showed that natural areas of adjacent undisturbed forest can act as a source of ectomycorrhizal fungi for dispersal into reclaimed areas. Notably, soil fungal taxa colonizing the root systems of small aspen included species that are specifically associated with soils from the undisturbed forest (primarily ectomycorrhizae) or the reclaimed clearing (saprotrophs and plant pathogens).

scholarly journals Impact of nitrogen and phosphorus addition on resident soil and root mycobiomes in beech forests

2021 ◽  
Author(s):  
S. Clausing ◽  
L. E. Likulunga ◽  
D. Janz ◽  
H. Y. Feng ◽  
D. Schneider ◽  
...  
Keyword(s):  
Ectomycorrhizal Fungi ◽  
N Fertilization ◽  
Fungal Communities ◽  
P Availability ◽  
Nitrogen And Phosphorus ◽  
Saprotrophic Fungi ◽  
Phosphorus Addition ◽  
Different Response ◽  
P Addition ◽  
Total P

AbstractN and P are essential macronutrients for all organisms. How shifts in the availability of N or P affect fungal communities in temperate forests is not well understood. Here, we conducted a factorial P × N fertilization experiment to disentangle the effects of nutrient availability on soil-residing, root-associated, and ectomycorrhizal fungi in beech (Fagus sylvatica) forests differing in P availability. We tested the hypotheses that in P-poor forests, P fertilization leads to enhanced fungal diversity in soil and roots, resulting in enhanced P nutrition of beech, and that N fertilization aggravates P shortages, shifting the fungal communities toward nitrophilic species. In response to fertilizer treatments (1 × 50 kg ha−1 P and 5 × 30 kg ha−1 N within 2 years), the labile P fractions increased in soil and roots, regardless of plant-available P in soil. Root total P decreased in response to N fertilization and root total P increased in response to P addition at the low P site. Ectomycorrhizal species richness was unaffected by fertilizer treatments, but the relative abundances of ectomycorrhizal fungi increased in response to P or N addition. At the taxon level, fungal assemblages were unaffected by fertilizer treatments, but at the order level, different response patterns for saprotrophic fungi among soil and ectomycorrhizal fungi on roots were found. Boletales increased in response to P, and Russulales decreased under N + P addition. Our results suggest that trait conservatism in related species afforded resistance of the resident mycobiome composition to nutritional imbalances.

Fungal and bacterial communities across meadow–forest ecotones in the western Cascades of Oregon

2008 ◽  
Vol 38 (5) ◽  
pp. 1053-1060 ◽  
Author(s):  
Stacie A. Kageyama ◽  
Nancy Ritchie Posavatz ◽  
Kirk E. Waterstripe ◽  
Sarah J. Jones ◽  
Peter J. Bottomley ◽  
...  
Keyword(s):  
Forest Soils ◽  
Bacterial Communities ◽  
Fungal Biomass ◽  
Bacterial Biomass ◽  
Forest Edge ◽  
Fungal Communities ◽  
Gradual Transition ◽  
Dynamic Features ◽  
Tree Roots ◽  
Saprotrophic Fungi

Meadows are natural dynamic features of forested mountain landscapes of the Pacific Northwest. Proportions of meadows and forests change with environmental conditions and disturbance history. We investigated the belowground microbial communities associated with these two vegetation types and how they change across the meadow–forest transition at two sites in Oregon. Soils were sampled along replicate transects extending from meadow into forest. We quantified total bacterial and fungal biomass using direct microscopy and described the composition of bacterial and fungal communities using a DNA-based fingerprinting technique. Bacterial biomass was similar in meadow and forest soils, but fungal biomass was significantly higher in forest soil. Meadow and forest soils had distinct communities of bacteria and fungi. Bacterial communities near the meadow–forest boundary reflected current vegetation, but fungal communities under meadow vegetation near the forest edge were intermediate in composition between those found in meadow and forest soils. The more gradual transition observed with fungal communities may reflect the influence of tree roots and their associated ectomycorrhizal fungi or possibly colonization by saprotrophic fungi associated with tree litter accumulating near the forest edge. Invasion of forest-associated fungi into the meadow soils may presage subsequent expansion of forest vegetation into meadows.

scholarly journals Spheres of Influence: Host Tree Proximity and Soil Chemistry Shape rRNA, but Not DNA, Communities of Symbiotic and Free-Living Soil Fungi in a Mixed Hardwood-Conifer Forest

2021 ◽  
Vol 9 ◽  
Author(s):  
Gabriel C. Runte ◽  
Alex H. Smith ◽  
Holly V. Moeller ◽  
Laura M. Bogar
Keyword(s):  
Ectomycorrhizal Fungi ◽  
Nitrogen Availability ◽  
Host Tree ◽  
Fungal Communities ◽  
Quercus Douglasii ◽  
Conifer Forest ◽  
Internal Transcribed Spacer Region ◽  
Free Living ◽  
Saprotrophic Fungi ◽  
Canopy Species

Host and symbiont diversity are inextricably linked across partnerships and ecosystems, with degree of partner reliance governing the strength of this correlation. In many forest soils, symbiotic ectomycorrhizal fungi coexist and compete with free-living saprotrophic fungi, with the outcomes of these interactions shaping resource availability and competitive outcomes for the trees aboveground. Traditional approaches to characterizing these communities rely on DNA sequencing of a ribosomal precursor RNA gene (the internal transcribed spacer region), but directly sequencing the precursor rRNA may provide a more functionally relevant perspective on the potentially active fungal communities. Here, we map ectomycorrhizal and saprotrophic soil fungal communities through a mixed hardwood-conifer forest to assess how above- and belowground diversity linkages compare across these differently adapted guilds. Using highly spatially resolved transects (sampled every 2 m) and well-mapped stands of varying host tree diversity, we sought to understand the relative influence of symbiosis versus environment in predicting fungal diversity measures. Canopy species in this forest included two oaks (Quercus agrifolia and Quercus douglasii) and one pine (Pinus sabiniana). At the scale of our study, spatial turnover in rRNA-based communities was much more predictable from measurable environmental attributes than DNA-based communities. And while turnover of ectomycorrhizal fungi and saprotrophs were predictable by the presence and abundance of different canopy species, they both responded strongly to soil nutrient characteristics, namely pH and nitrogen availability, highlighting the niche overlap of these coexisting guilds and the strong influence of aboveground plants on belowground fungal communities.

Effects of selective cuts on the mycorrhizae of regenerating Betula alleghaniensis and Acer saccharum seedlings in two Quebec mixed deciduous forests

2002 ◽  
Vol 32 (6) ◽  
pp. 1094-1102 ◽  
Author(s):  
Tonia DeBellis ◽  
Paul Widden ◽  
Christian Messier
Keyword(s):  
Ectomycorrhizal Fungi ◽  
Acer Saccharum ◽  
Sugar Maple ◽  
Arbuscular Mycorrhizae ◽  
Betula Alleghaniensis ◽  
Yellow Birch ◽  
Negative Effect ◽  
Undisturbed Forest ◽  
Ectomycorrhizal Colonization ◽  
Study Sites

The mycorrhizae of younger (2- to 3-year-old) and older (5- to 12-year-old) yellow birch (Betula alleghaniensis Britton) and sugar maple (Acer saccharum Marsh.) seedlings and saplings were recorded from naturally regenerating plants in gaps created by selective cuts and compared with those of plants of comparable age growing in the undisturbed forest. The levels of ectomycorrhizal colonization and the diversity of ectomycorrhizal fungi (based on morphotyping) were recorded for yellow birch and the levels of colonization and the abundance of arbuscules, vesicles, and coils were reported for the vesicular–arbuscular mycorrhizae of sugar maples. Selective cutting had no negative effect on the mycorrhizal community structure of yellow birch and sugar maple. This may be because of the quick regeneration of the mycorrhizal hosts coupled with the minor levels of soil disruption and relatively small gap size at the study sites. Greater colonization levels in the gaps versus uncut areas were observed in the 2- to 3-year-old maples but not in the 2- to 3-year-old birch seedlings. The types of ectomycorrhizal fungi colonizing the roots of birch seedlings from the gaps did not differ from those in the uncut forest areas.

scholarly journals Ectomycorrhizal Fungi Associated with Pinus densiflora Seedlings under Flooding Stress

2021 ◽  
Vol 13 (8) ◽  
pp. 4367
Author(s):  
Yoonhee Cho ◽  
Shinnam Yoo ◽  
Myung Soo Park ◽  
Ji Seon Kim ◽  
Chang Sun Kim ◽  
...  
Keyword(s):  
Ectomycorrhizal Fungi ◽  
Internal Transcribed Spacer ◽  
Pinus Densiflora ◽  
Red Pine ◽  
Fungal Communities ◽  
Thelephora Terrestris ◽  
Suillus Luteus ◽  
Flooding Stress ◽  
Pine Seedlings ◽  
Rhizopogon Luteolus

Flooding is an environmental stress for plants that not only limits aeration and nutrient acquisition, but also disturbs underground plant-associated fungal communities. Despite frequent flooding, red pine (Pinus densiflora) seedlings thrive in streamside environments. However, whether the compatible ectomycorrhizal fungi (EMF) of red pine are affected by natural flooding is unclear. As EMF are vital symbionts for the development of many trees and allow them to overcome various environmental stresses, in this study, the EMF species associated with red pine seedlings in a streamside environment in Korea were investigated after flooding. The EMF species in 47 seedlings collected from the streamside site were identified by observing their different morphotypes using internal transcribed spacer sequence analysis, and a total of 10 EMF species were identified. The EMF species diversity was lower than that in samples collected from a nearby forest analyzed as a control. The dominant EMF species of streamside seedlings included Amphinema spp., Rhizopogon luteolus, Suillus luteus, and Thelephora terrestris. This study could serve as a basis for investigating the mechanisms by which advantageous EMF aid plant development under flooding stress.

Ectomycorrhizal fungal communities of Dipterocarpus alatus seedlings introduced by soil inocula from a natural forest and a plantation

2014 ◽  
Vol 19 (2) ◽  
pp. 260-267 ◽  
Author(s):  
Tharnrat Kaewgrajang ◽  
Uthaiwan Sangwanit ◽  
Motoichiro Kodama ◽  
Masahide Yamato
Keyword(s):  
Natural Forest ◽  
Fungal Communities ◽  
Dipterocarpus Alatus

scholarly journals Morphological and anatomical comparison of mericarps from different types of umbels of Heracleum sosnowskyi / Sosnovskio barščio skirtingų tipų žiedynų merikarpių morfologinės ir anatominės sandaros palyginamoji analizė

2016 ◽  
Vol 22 (2) ◽  
pp. 161-168 ◽  
Author(s):  
Sigita Jurkonienė ◽  
Tautvydas Žalnierius ◽  
Virgilija Gavelienė ◽  
Danguolė Švegždienė ◽  
Laurynas Šiliauskas ◽  
...  
Keyword(s):  
Seed Bank ◽  
Invasive Plant ◽  
Forest Edge ◽  
Natural Forest ◽  
Sem Micrographs ◽  
Complete Development ◽  
Heracleum Sosnowskyi ◽  
Morphometrical Analysis ◽  
Different Types

Abstract Sosnowsky’s hogweed (Heracleum sosnowskyi Manden.) mericarps were collected from satellite and stem branch umbels for comparative anatomical investigation. Located near Vilnius city, the habitat of Heracleum sosnowskyi, formerly a natural forest edge has recently been densely occupied by plants of this species. SEM micrographs of abaxial and adaxial surfaces of mericarps obtained from satellite and stem branch umbels of H. sosnowskyi were similar, but morphometrical analysis revealed statistically significant differences in mericarps collected from satellite umbels, which were longer and wider than mericarps from stem branch umbels. The data on longitudinal sections of H. sosnowskyi mericarps clearly showed that embryos of satellite umbels were at later torpedo stage compared to embryos of stem branch umbels, which were at earlier heart stage. These data represent unequal development of the embryos in mericarps from different types of umbels. Such different development can be treated as an adaptation of the invasive plant to occupy the current habitat and survive in the seed bank by allowing the embryo to complete development within a seed and germinate when new conditions permit.

scholarly journals Fungi in Permafrost-Affected Soils of the Canadian Arctic: Horizon- and Site-Specific Keystone Taxa Revealed by Co-Occurrence Network

2021 ◽  
Vol 9 (9) ◽  
pp. 1943
Author(s):  
Milan Varsadiya ◽  
Tim Urich ◽  
Gustaf Hugelius ◽  
Jiří Bárta
Keyword(s):  
Organic Matter ◽  
Soil Organic Matter ◽  
Plant Pathogens ◽  
Close Contact ◽  
Relative Proportion ◽  
Canadian Arctic ◽  
Clustering Coefficient ◽  
Fungal Communities ◽  
Soil Horizon ◽  
Internal Transcribed Spacer Region

Permafrost-affected soil stores a significant amount of organic carbon. Identifying the biological constraints of soil organic matter transformation, e.g., the interaction of major soil microbial soil organic matter decomposers, is crucial for predicting carbon vulnerability in permafrost-affected soil. Fungi are important players in the decomposition of soil organic matter and often interact in various mutualistic relationships during this process. We investigated four different soil horizon types (including specific horizons of cryoturbated soil organic matter (cryoOM)) across different types of permafrost-affected soil in the Western Canadian Arctic, determined the composition of fungal communities by sequencing (Illumina MPS) the fungal internal transcribed spacer region, assigned fungal lifestyles, and by determining the co-occurrence of fungal network properties, identified the topological role of keystone fungal taxa. Compositional analysis revealed a significantly higher relative proportion of the litter saprotroph Lachnum and root-associated saprotroph Phialocephala in the topsoil and the ectomycorrhizal close-contact exploring Russula in cryoOM, whereas Sites 1 and 2 had a significantly higher mean proportion of plant pathogens and lichenized trophic modes. Co-occurrence network analysis revealed the lowest modularity and average path length, and highest clustering coefficient in cryoOM, which suggested a lower network resistance to environmental perturbation. Zi-Pi plot analysis suggested that some keystone taxa changed their role from generalist to specialist, depending on the specific horizon concerned, Cladophialophora in topsoil, saprotrophic Mortierella in cryoOM, and Penicillium in subsoil were classified as generalists for the respective horizons but specialists elsewhere. The litter saprotrophic taxon Cadophora finlandica played a role as a generalist in Site 1 and specialist in the rest of the sites. Overall, these results suggested that fungal communities within cryoOM were more susceptible to environmental change and some taxa may shift their role, which may lead to changes in carbon storage in permafrost-affected soil.

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