Genetic Connectivity Patterns of CoralsPocillopora damicornisandPorites panamensis(Anthozoa: Scleractinia) Along the West Coast of Mexico

2012 ◽  
Vol 66 (1) ◽  
pp. 43-61 ◽  
Author(s):  
David A. Paz-García ◽  
Héctor E. Chávez-Romo ◽  
Francisco Correa-Sandoval ◽  
Héctor Reyes-Bonilla ◽  
Andrés López-Pérez ◽  
...  
Keyword(s):  
West Coast ◽  
Genetic Connectivity ◽  
The West ◽  
Connectivity Patterns

scholarly journals Population structure, genetic connectivity, and adaptation in the Olympia oyster (Ostrea lurida) along the west coast of North America

2018 ◽  
Author(s):  
Katherine Silliman
Keyword(s):  
Population Structure ◽  
Gene Flow ◽  
North America ◽  
West Coast ◽  
Marine Species ◽  
Genetic Connectivity ◽  
Ostrea Lurida ◽  
The West ◽  
Olympia Oyster ◽  
Outlier Loci

ABSTRACTEffective management of threatened and exploited species requires an understanding of both the genetic connectivity among populations and local adaptation. The Olympia oyster (Ostrea lurida), patchily distributed from Baja California to the central coast of Canada, has a long history of population declines due to anthropogenic stressors. For such coastal marine species, population structure could follow a continuous isolation-by-distance model, contain regional blocks of genetic similarity separated by barriers to gene flow, or be consistent with a null model of no population structure. To distinguish between these hypotheses in O. lurida, 13,444 single-nucleotide polymorphisms (SNPs) were used to characterize rangewide population structure, genetic connectivity, and adaptive divergence. Samples were collected across the species range on the west coast of North America, from southern California to Vancouver Island. A conservative approach for detecting putative loci under selection identified 288 SNPs across 129 GBS loci, which were functionally annotated and analyzed separately from the remaining neutral loci. While strong population structure was observed on a regional scale in both neutral and outlier markers, neutral markers had greater power to detect fine-scale structure. Geographic regions of reduced gene flow aligned with known marine biogeographic barriers, such as Cape Mendocino, Monterey Bay, and the currents around Cape Flattery. The outlier loci identified as under putative selection included genes involved in developmental regulation, sensory information processing, energy metabolism, immune response, and muscle contraction. These loci are excellent candidates for future research and may provide targets for genetic monitoring programs. Beyond specific applications for restoration and management of the Olympia oyster, this study lends to the growing body of evidence for both population structure and adaptive differentiation across a range of marine species exhibiting the potential for panmixia. Computational notebooks are available to facilitate reproducibility and future open-sourced research on the population structure of O. lurida.

scholarly journals Barrier to Gene Flow of Grey Mangrove Avicennia marina Populations in the Malay Peninsula as Revealed From Nuclear Microsatellites and Chloroplast Haplotypes

2021 ◽  
Vol 2 ◽  
Author(s):  
Ludwig Triest ◽  
Behara Satyanarayana ◽  
Olga Delange ◽  
Kishore Kumar Sarker ◽  
Tim Sierens ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Genetic Structure ◽  
West Coast ◽  
East Coast ◽  
Avicennia Marina ◽  
Genetic Connectivity ◽  
Malay Peninsula ◽  
The West ◽  
Genetic Break ◽  
Strait Of Malacca

Contemporary mangrove forest areas took shape historically and their genetic connectivity depends on sea-faring propagules, subsequent settlement, and persistence in suitable environments. Mangrove species world-wide may experience genetic breaks caused by major land barriers or opposing ocean currents influencing their population genetic structure. For Malay Peninsula, several aquatic species showed strong genetic differentiation between East and West coast regions due to the Sunda shelf flooding since the Last Glacial Maximum. In this study genetic diversity and structure of Avicennia marina populations in Malay Peninsula were assessed using nuclear microsatellite markers and chloroplast sequences. Even though all populations showed identical morphological features of A. marina, three evolutionary significant units were obtained with nuclear and cytoplasmic markers. Avicennia marina along a 586 km stretch of the West coast differed strongly from populations along an 80 km stretch of the East coast featuring chloroplast capture of Avicennia alba in an introgressive A. marina. Over and above this expected East-West division, an intra-regional subdivision was detected among A. marina populations in the narrowest region of the Strait of Malacca. The latter genetic break was supported by an amova, structure, and barrier analysis whereas RST > FST indicated an evolutionary signal of long-lasting divergence. Two different haplotypes along the Western coast showed phylogeographic relationship with either a northern or a putative southern lineage, thereby assuming two Avicennia sources facing each other during Holocene occupation with prolonged separation in the Strait of Malacca. Migrate-n model testing supported a northward unidirectional stepping-stone migration route, although with an unclear directionality at the genetic break position, most likely due to weak oceanic currents. Low levels of genetic diversity and southward connectivity was detected for East coast Avicennia populations. We compared the fine-scale spatial genetic structure (FSGS) of Avicennia populations along the exposed coast in the East vs. the sheltered coast in the West. A majority of transects from both coastlines revealed no within-site kinship-based FSGS, although the remoteness of the open sea is important for Avicennia patches to maintain a neighborhood. The results provide new insights for mangrove researchers and managers for future in-depth ecological-genetic-based species conservation efforts in Malay Peninsula.

Eelgrass (Zostera marina) restoration on the west coast of Sweden using seeds

2016 ◽  
Vol 546 ◽  
pp. 31-45 ◽  
Author(s):  
E Infantes ◽  
L Eriander ◽  
PO Moksnes
Keyword(s):  
West Coast ◽  
Zostera Marina ◽  
The West

Changes in soil quality following humping/hollowing and flipping of pakihi soils on the West Coast, South Island New Zealand

2007 ◽  
pp. 265-270 ◽  
Author(s):  
S.M. Thomas ◽  
M.H.Beare C.D. Ford ◽  
V. Rietveld
Keyword(s):  
Organic Matter ◽  
Soil Quality ◽  
West Coast ◽  
Land Development ◽  
Hot Water ◽  
Limited Information ◽  
The West ◽  
Organic Matter Quality ◽  
Pasture Production ◽  
Soil C

Humping/hollowing and flipping are land development practices widely used on the West Coast to overcome waterlogging constraints to pasture production. However, there is very limited information about how the resulting "new" soils function and how their properties change over time following these extreme modifications. We hypothesised that soil quality will improve in response to organic matter inputs from plants and excreta, which will in turn increase nutrient availability. We tested this hypothesis by quantifying the soil organic matter and nutrient content of soils at different stages of development after modification. We observed improvements in soil quality with increasing time following soil modification under both land development practices. Total soil C and N values were very low following flipping, but over 8 years these values had increased nearly five-fold. Other indicators of organic matter quality such as hot water extractable C (HWC) and anaerobically mineralisable N (AMN) showed similar increases. With large capital applications of superphosphate fertiliser to flipped soils in the first year and regular applications of maintenance fertiliser, Olsen P levels also increased from values

From Hard Money to Branch Banking

2016 ◽  
Vol 93 (1) ◽  
pp. 26-44
Author(s):  
Larry Schweikart ◽  
Lynne Pierson Doti
Keyword(s):  
West Coast ◽  
Financial Sector ◽  
Gold Rush ◽  
Test Case ◽  
The West ◽  
Branch Banking

In Gold Rush–era California, banking and the financial sector evolved in often distinctive ways because of the Gold Rush economy. More importantly, the abundance of gold on the West Coast provided an interesting test case for some of the critical economic arguments of the day, especially for those deriving from the descending—but still powerful—positions of the “hard money” Jacksonians.

GEODIVERSIDADE E A PRÁTICA DE CAMPOS (ROTEIROS ESCOLARES) NO LITORAL COMO SUBSÍDIOS AO ENSINO DE GEOGRAFIA (FÍSICA)

2019 ◽  
Vol 21 (2) ◽  
pp. 1006-1018
Author(s):  
Ana Alexandre Santos Rodrigues ◽  
Francisco Asis Aquino Bezerra Filho ◽  
Jáder Onofre de Morais ◽  
Lidrana De Souza Pinheiro
Keyword(s):  
Higher Education ◽  
Scientific Knowledge ◽  
Coastal Plain ◽  
West Coast ◽  
Daily Life ◽  
Higher Education Institutions ◽  
Classical Literature ◽  
The West ◽  
Field Practice ◽  
Teachers And Students

As práticas de campo proporcionam aos discentes uma proximidade com o cotidiano. A metodologia proposta no estudo sugere uma divulgação simplificada do conhecimento cientifico da Planície Litorânea de Almofala, propondo rotas de acesso didáticas para práticas de campo que auxiliem os professores das escolas de Itarema. Para a complementação teórica foram considerados como base os inventários da Geodiversidade cientifica do litoral oeste do estado do Ceará, realizados no âmbito do projeto PRONEX. Isso foi feito por pesquisadores de várias Instituições de Ensino Superior do Ceará, e a literatura clássica local. Enquanto resultados discutidos, considerou-se que estes roteiros de práticas de campo podem ser estabelecidos e decididos em conjunto, entre professores e alunos. Tendo como base o mapa interpretativo dos roteiros, com intuito de realizar o reconhecimento e entendimento da dinâmica costeira.Palavras-chave: Educação; Geodiversidade; Planície Litorânea. ABSTRACTField practices provide students with a closeness to daily life. The methodology proposed in the study suggests a simplified dissemination of scientific knowledge of the Almofala Coastal Plain, proposing didactic access routes for field practices that help teachers of Itarema schools. For theoretical complementation, the inventories of the scientific geodiversity of the west coast of the state of Ceará, carried out under the PRONEX project were considered. It was done by researchers from various Higher Education Institutions in Ceará, and its local classical literature. As results discussed, it was considered that these field practice roadmaps can be jointly established and decided between teachers and students. Based on the interpretative map of the roadmaps, in order to recognize and understand the coastal dynamics.Keywords: Education; Geodiversity; Coastal plain. RESUMENLas prácticas de campo ofrecen a los estudiantes una cercanía a la vida diaria. La metodología propuesta en el estudio sugiere una divulgación simplificada del conocimiento científico sobre la llanura costera de Almofala, proponiendo rutas de acceso didáctico para prácticas de campo que ayudan a los docentes de las escuelas de Itarema. Para la complementación teórica fueron considerados como información base los inventarios de la geodiversidad científica de la costa oeste del estado de Ceará, realizados en el ámbito del proyecto PRONEX. Fue realizado por investigadores de varias instituciones de educación superior en Ceará, y la literatura clásica local. En cuanto a los resultados discutidos, se consideró que estas hojas de ruta de prácticas de campo pueden ser establecidas y escogidas conjuntamente entre docentes y estudiantes, con base en el mapa interpretativo de ruta, con el fin de reconocer y comprender la dinámica costera de esta región.Palabras clave: Educación; Geodiversidad; Llanura costera.

Sign in / Sign up

Export Citation Format

Share Document