scholarly journals Population structure, genetic connectivity, and adaptation in the Olympia oyster (Ostrea lurida) along the west coast of North America

2018 ◽  
Author(s):  
Katherine Silliman
Keyword(s):  
Population Structure ◽  
Gene Flow ◽  
North America ◽  
West Coast ◽  
Marine Species ◽  
Genetic Connectivity ◽  
Ostrea Lurida ◽  
The West ◽  
Olympia Oyster ◽  
Outlier Loci

ABSTRACTEffective management of threatened and exploited species requires an understanding of both the genetic connectivity among populations and local adaptation. The Olympia oyster (Ostrea lurida), patchily distributed from Baja California to the central coast of Canada, has a long history of population declines due to anthropogenic stressors. For such coastal marine species, population structure could follow a continuous isolation-by-distance model, contain regional blocks of genetic similarity separated by barriers to gene flow, or be consistent with a null model of no population structure. To distinguish between these hypotheses in O. lurida, 13,444 single-nucleotide polymorphisms (SNPs) were used to characterize rangewide population structure, genetic connectivity, and adaptive divergence. Samples were collected across the species range on the west coast of North America, from southern California to Vancouver Island. A conservative approach for detecting putative loci under selection identified 288 SNPs across 129 GBS loci, which were functionally annotated and analyzed separately from the remaining neutral loci. While strong population structure was observed on a regional scale in both neutral and outlier markers, neutral markers had greater power to detect fine-scale structure. Geographic regions of reduced gene flow aligned with known marine biogeographic barriers, such as Cape Mendocino, Monterey Bay, and the currents around Cape Flattery. The outlier loci identified as under putative selection included genes involved in developmental regulation, sensory information processing, energy metabolism, immune response, and muscle contraction. These loci are excellent candidates for future research and may provide targets for genetic monitoring programs. Beyond specific applications for restoration and management of the Olympia oyster, this study lends to the growing body of evidence for both population structure and adaptive differentiation across a range of marine species exhibiting the potential for panmixia. Computational notebooks are available to facilitate reproducibility and future open-sourced research on the population structure of O. lurida.

scholarly journals Widespread Dispersal of the Crown-of-Thorns Sea Star,Acanthaster planci, across the Hawaiian Archipelago and Johnston Atoll

2011 ◽  
Vol 2011 ◽  
pp. 1-10 ◽  
Author(s):  
Molly A. Timmers ◽  
Kimberly R. Andrews ◽  
Chris E. Bird ◽  
Marta J. deMaintenton ◽  
Russell E. Brainard ◽  
...  
Keyword(s):  
Population Structure ◽  
Gene Flow ◽  
Larval Dispersal ◽  
Hawaiian Islands ◽  
Marine Species ◽  
Sea Star ◽  
Acanthaster Planci ◽  
The West ◽  
Geographic Population ◽  
Hawaiian Archipelago

The population structure of marine species is variable along the Hawaiian Archipelago; thus, it is important to understand dispersal and recruitment patterns for economically and ecologically important taxa to inform Ecosystem-based Management. Connectivity of the coral-eating crown-of-thorns sea star,Acanthaster planci, was examined from Johnston Atoll and 12 locations across the Hawaiian Archipelago. Sequences of mitochondrial DNA from 383 individuals were analyzed to infer patterns of gene flow among the Northwestern Hawaiian Islands (NWHIs), the main Hawaiian Islands, and Johnston Atoll. Population samples were genetically similar across the Hawaiian Archipelago with the exception of the west side of the Big Island of Hawaii, which was significantly differentiated from the majority of Hawaiian samples (pairwise , ). Although differentiated, Hawai`i West shares haplotypes with every other site across the Hawaiian Archipelago. Johnston Atoll was genetically distinct from every location (pairwise , ) except French Frigate Shoals (, ), supporting connectivity between the central NWHIs and Johnston Atoll. Taken together with the lack of geographic population structure and haplotypes shared among all populations, these results indicate widespread larval dispersal with few restrictions to gene flow along the archipelago.

The Lower Jurassic phosphorites of southeastern British Columbia and terrane accretion to western North America

1989 ◽  
Vol 26 (8) ◽  
pp. 1612-1616 ◽  
Author(s):  
T. P. Poulton ◽  
J. D. Aitken
Keyword(s):  
British Columbia ◽  
North America ◽  
Oceanic Crust ◽  
West Coast ◽  
Cold Water ◽  
Lower Jurassic ◽  
Depositional Model ◽  
Western North America ◽  
The West ◽  
Terrane Accretion

Sinemurian phosphorites in southeastern British Columbia and southwestern Alberta conform with the "West Coast type" phosphorite depositional model. The model indicates that they were deposited on or near the Early Jurassic western cratonic margin, next to a sea or trough from which cold water upwelled. This suggests that the allochthonous terrane Quesnellia lay well offshore in Sinemurian time. The sea separating Quesnellia from North America was partly floored by oceanic crust ("Eastern Terrane") and partly by a thick sequence of rifted, continental terrace wedge rocks comprising the Purcell Supergroup and overlying Paleozoic sequence. This sequence must have been depressed sufficiently that access of upwelling deep currents to the phosphorite depositional area was not impeded.

scholarly journals A taxonomic review of pterotracheoid gastropod mollusks from California Current waters off the west coast of North America

Zoosymposia ◽  
2019 ◽  
Vol 13 (1) ◽  
pp. 147-150
Author(s):  
ROGER R. SEAPY
Keyword(s):  
North America ◽  
West Coast ◽  
Morphological Characteristics ◽  
California Current ◽  
Single Species ◽  
The West ◽  
Taxonomic Review ◽  
Gastropod Mollusks ◽  
Taxonomic Characterization

Taxonomic characterization of pterotracheoid gastropods, morphological characteristics and occurrence in California Current waters are reviewed. Single species of atlantid (Atlanta californiensis) and carinariid (Carinaria japonica) from these waters are described and illustrated.

scholarly journals The Timeless African and the Versatile Indian in Seventeenth-Century Travelogues

2005 ◽  
Vol 14 (1) ◽  
pp. 23-44
Author(s):  
Michel Duquet
Keyword(s):  
Seventeenth Century ◽  
North America ◽  
American Indian ◽  
West Coast ◽  
Tropical Environment ◽  
The West ◽  
The North ◽  
Native Populations ◽  
French And English ◽  
North American Indian

Abstract The seventeenth century saw the early stages of significant trading on the west coast of Africa as well as the establishment of permanent settlements in North America by Dutch, French and English explorers, merchants, colonists and missionaries in a period marked by the imperial contest that had been set in motion on the heels of the discovery of America in 1492. The travelers who wrote about their voyages overseas described at length the natives they encountered on the two continents. The images of the North American Indian and of the African that emerged from these travel accounts were essentially the same whether they be of Dutch, French or English origin. The main characteristic in the descriptions of African native populations was its permanent condemnation while representations of the Indian were imbued with sentiments ranging from compassion, censure and admiration. The root causes for this dichotomy were the inhospitable and deadly (to Europeans) tropical environment of Africa’s West Coast and the growing knowledge of local societies that Europeans acquired in North America. The analysis of the contrasting images of natives on both sides of the Atlantic and the context within which they were produced are the focus of the paper.

scholarly journals Two new marine species of Cocconeis (Bacillariophyceae) from the west coast of Sweden

2019 ◽  
Author(s):  
Adil Y. Al-Handal ◽  
Catherine Riaux-Gobin ◽  
Regine Jahn ◽  
Angela Katarina Wulff ◽  
Alison Minerovic
Keyword(s):  
West Coast ◽  
Light And Electron Microscopy ◽  
Marine Species ◽  
Benthic Diatom ◽  
Small Island ◽  
Coastal Regions ◽  
The West ◽  
Two New Species ◽  
Ulva Intestinalis ◽  
Microscopy Examination

This paper is part of a project of studying benthic diatom biodiversity on marine coastal regions of Sweden with focus on rare and less known species. Two new species of Cocconeis Ehrenb. are described from Vrångö, a small island in the west coast of Sweden. Both species were found as epiphytic on the green alga Ulva intestinalis L. Cocconeis magnoareolata Al-Handal, Riaux-Gob., R.Jahn & A.K.Wulff sp. nov. is a small species not exceeding 9 µm in length and characterized by having large subquadrangular areolae on the sternum valve. Cocconeis vrangoensis Al-Handal & Riaux-Gob. sp. nov. appears similar to some taxa of the ‘Cocconeis scutellum complex’, but differs by its stria density on both valves and variable features of the areola and valvocopula ultrastructure. Detailed descriptions based on light and electron microscopy examination, a comparison with closely related taxa, as well as a description of the habitat of both species are here presented.

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