3P-097 Structure-based Analysis of Cooperativity in Protein-DNA Recognition(Nucleic acid:Interaction & Complex formation,The 47th Annual Meeting of the Biophysical Society of Japan)

Akihiro Tanaka; Satoshi Fujii; Hidetoshi Kono; Akinori Sarai

doi:10.2142/biophys.49.s167_4

3P-097 Structure-based Analysis of Cooperativity in Protein-DNA Recognition(Nucleic acid:Interaction & Complex formation,The 47th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.49.s167_4 ◽

2009 ◽

Vol 49 (supplement) ◽

pp. S167

Author(s):

Akihiro Tanaka ◽

Satoshi Fujii ◽

Hidetoshi Kono ◽

Akinori Sarai

Keyword(s):

Complex Formation ◽

Annual Meeting ◽

Dna Recognition ◽

Biophysical Society

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2P-088 Role of indirect readout in protein-DNA recognition assessed by a Bayesian approach(Nucleic acid:Interaction & Complex formation,The 47th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.49.s119_7 ◽

2009 ◽

Vol 49 (supplement) ◽

pp. S119-S120

Author(s):

Satoshi Yamasaki ◽

Kazuhiko Fukui ◽

Hidetoshi Kono ◽

Kentaro Shimizu ◽

Akinori Sarai ◽

...

Keyword(s):

Complex Formation ◽

Annual Meeting ◽

Bayesian Approach ◽

Dna Recognition ◽

Biophysical Society ◽

Indirect Readout

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2P-066 The complex formation of Rpp21 and Rpp29 plays an important role in catalytic activity of ribonuclease P.(The 46th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.48.s85_3 ◽

2008 ◽

Vol 48 (supplement) ◽

pp. S85

Author(s):

Takashi Honda ◽

Yoshimitu Kakuta ◽

Makoto Kimura

Keyword(s):

Catalytic Activity ◽

Complex Formation ◽

Annual Meeting ◽

Ribonuclease P ◽

Biophysical Society

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3P128 Metal Cations(2+) Cause the Folding Transition of DNA but Inhibit Spermidine(3+)-Induced Compaction(05B. Nucleic acid: Interaction & Complex formation,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s270_2 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S270

Author(s):

Chika Tongu ◽

Yuko Yoshikawa ◽

Anatoly A Zinchenko ◽

Chen Ning ◽

Takahiro Kenmotsu ◽

...

Keyword(s):

Nucleic Acid ◽

Complex Formation ◽

Annual Meeting ◽

Metal Cations ◽

Acid Interaction ◽

Biophysical Society

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1P-218 Change of interaction in cytoplasmic surface region of ppR with pHtrII in the complex formation as studied by solid-state NMR(Photobiology:Vision & Photoreception, The 47th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.49.s96_6 ◽

2009 ◽

Vol 49 (supplement) ◽

pp. S96

Author(s):

Takahiro Kondo ◽

Izuru Kawamura ◽

Takudo Nisio ◽

Naoki Kamo ◽

Akira Naito

Keyword(s):

Solid State ◽

Complex Formation ◽

Annual Meeting ◽

Solid State Nmr ◽

Surface Region ◽

Cytoplasmic Surface ◽

Biophysical Society

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1P-101 Single-molecule force measurement for 30S-mRNA interaction in translation initiation(Nucleic acid:Interaction & Complex formation, The 47th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.49.s79_5 ◽

2009 ◽

Vol 49 (supplement) ◽

pp. S79

Author(s):

Tomoaki Masuda ◽

Ryo Iizuka ◽

Takashi Funatsu ◽

Sotaro Uemura

Keyword(s):

Complex Formation ◽

Annual Meeting ◽

Single Molecule ◽

Translation Initiation ◽

Force Measurement ◽

Biophysical Society

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2P-086 Genome-wide target prediction of transcriptional facto r: a method based on interaction data(Nucleic acid:Interaction & Complex formation,The 47th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.49.s119_5 ◽

2009 ◽

Vol 49 (supplement) ◽

pp. S119

Author(s):

Hiroaki Ohba ◽

satoshi Fujii ◽

Akinori Sarai

Keyword(s):

Complex Formation ◽

Annual Meeting ◽

Target Prediction ◽

Interaction Data ◽

Genome Wide ◽

Biophysical Society

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1P-080 Supramolecular complex formation and crystallization of isocitrate dehydrogenase from Thermus thermophilus HB8(The 46th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.48.s33_4 ◽

2008 ◽

Vol 48 (supplement) ◽

pp. S33

Author(s):

Noriyuki Ishii ◽

Kazuo Umemura ◽

Kentaro Miyazaki

Keyword(s):

Complex Formation ◽

Annual Meeting ◽

Isocitrate Dehydrogenase ◽

Thermus Thermophilus ◽

Supramolecular Complex ◽

Thermus Thermophilus Hb8 ◽

Biophysical Society

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3P202 CheV proteins are involved in the signaling complex formation in Vibrio cholerae(Cell biology,The 48th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.50.s180_4 ◽

2010 ◽

Vol 50 (supplement2) ◽

pp. S180

Author(s):

Geetha Hiremath ◽

So-ichiro Nishiyama ◽

Ikuro Kawagishi

Keyword(s):

Complex Formation ◽

Vibrio Cholerae ◽

Annual Meeting ◽

Cell Biology ◽

Signaling Complex ◽

Biophysical Society ◽

Cholerae Cell

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1P118 FCS analysis of DNA recognition movements of transcription factor FMBP-1 contains a novel DNA binding domain STPR in situ condition(04. Nucleic acid binding proteins,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s160_4 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S160

Author(s):

Motosuke Tsutsumi ◽

Hideki Muto ◽

Mai Kimoto ◽

Masakatsu Kamiya ◽

Takashi Kikukawa ◽

...

Keyword(s):

Transcription Factor ◽

Nucleic Acid ◽

Dna Binding ◽

Annual Meeting ◽

Dna Recognition ◽

Dna Binding Domain ◽

Nucleic Acid Binding ◽

Biophysical Society ◽

Nucleic Acid Binding Proteins

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2P125 Action of tetrazolato-bridged dinuclear platinum(II) complexes with ester moiety on the higher order structure of DNA(05B. Nucleic acid: Interaction & Complex formation,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s215_5 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S215

Author(s):

Yuta Shimizu ◽

Akira Muramatsu ◽

Yuko Yoshikawa ◽

Takahiro Tsuchiya ◽

Hiroki Yoneyama ◽

...

Keyword(s):

Nucleic Acid ◽

Complex Formation ◽

Annual Meeting ◽

Higher Order ◽

Order Structure ◽

Acid Interaction ◽

Dinuclear Platinum ◽

Biophysical Society ◽

Ester Moiety

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