MINTEQA2/PRODEFA2-A Geochemical Speciation Model and Interactive Preprocessor

Author(s):  
Jerry D. Allison ◽  
David S. Brown
Author(s):  
Zhiliang Chen ◽  
Peng Zhang ◽  
Kevin G. Brown ◽  
Janelle L. Branch ◽  
Hans A. van der Sloot ◽  
...  

2019 ◽  
Vol 16 (33) ◽  
pp. 736-748
Author(s):  
M. A. KLUNK ◽  
S. DASGUPTA ◽  
M. DAS ◽  
P. R. WANDER ◽  
A. DI CAPUA

Geochemical modeling has been frequently used to understand and interpret water-rock interactions in sedimentary basins. Thermodynamic data, kinetic parameters, numerical methods, boundary history, and boundary conditions are factors affecting any geochemical modeling system. In the present study, we have attempted to establish a geochemical speciation model by comparing the interaction of formation water and carbonate rock in the carbonate depositional settings of Cambrian successions of Bachu and Tarim area. A comparative study of geochemical speciation has been performed using four different software: PHREEQCTM, GWBTM, TOUGHREACTTM, and GEODELING. GEODELING is a geochemical code simulator that we have developed, and the details are presented further in this work. All the software has been analyzed minutely, considering the distribution, mobility, and availability of chemical species in geological environments. Very similar results in speciation are observed while working with low-temperature systems. A discrepancy can be observed in the results while working with high temperatures. However, a thorough Newton-Raphson formulation, scaling of algebraic equations and master-species switching helps to reduce the possibility of failures of the numerical method used in PHREEQCTM.


1994 ◽  
Vol 353 ◽  
Author(s):  
M. B. Crawford ◽  
J. J. W. Higgo ◽  
J. Davis

AbstractNatural organic compounds can play an important role in the transport of radionuclides through the geosphere, but the inclusion of polyelectrolytic fulvic and humic acids into geochemical speciation codes is not straightforward. Schubert ion-exchange experiments have been used to parameterise an equilibrium-based, discrete site-electrostatic model, Model V, which is concerned with predicting trace metal-humic interactions in solution. However, before such a model can be applied to natural groundwaters, its ability to deal with competition between trace cations and anionic ligands has to be tested.PHREEQEV, which incorporates Model V with the inorganic speciation code PHREEQE, has been used to guide experiments based on a modified Hummel-Dreyer method. To improve speed and precision, these experiments used a HPLC method rather than Sephadex gel, and measured the effect of Ca on Co and Ni binding to fulvic acid. The results were compared with the predictions made by PHREEQEV. Although the system was further complicated by the need to add citric acid to prevent binding of metals to the HPLC column, predictions at pH 5 were good for both metals. At pH 7, the Co binding results were not well predicted and the reasons for this are still unclear. Comparisons between the Schubert and Hummel-Dreyer-type experiments show that the two methods are compatible.


2020 ◽  
Vol 108 (11) ◽  
pp. 873-877
Author(s):  
Tetsuji Yamaguchi ◽  
Saki Ohira ◽  
Ko Hemmi ◽  
Logan Barr ◽  
Asako Shimada ◽  
...  

AbstractSorption distribution coefficient (Kd) of niobium-94 on minerals are an important parameter in safety assessment of intermediate-depth disposal of waste from core internals etc. The Kd of Nb on clay minerals in Ca(ClO4)2 solutions were, however, not successfully modeled in a previous study. The high distribution coefficients of Nb on illite in Ca(ClO4)2 solutions were successfully reproduced by taking Ca–Nb–OH surface species into account. Solubility of Nb was studied in Ca(ClO4)2 solutions and the results were reproduced by taking an aqueous Ca–Nb–OH complex species, CaNb(OH)6+, into account in addition to previously reported Nb(OH)6− and Nb(OH)72−. Based on this aqueous speciation model, the Ca–Nb–OH surface species responsible for the sorption of Nb on illite in Ca(ClO4)2 solutions was presumed to be X_OCaNb(OH)6. Although uncertainties exist in the speciation of aqueous Ca–Nb–OH species, the result of this study proposed a possible mechanism for high distribution coefficient of Nb on illite in Ca(ClO4)2 solutions. The mechanism includes Ca–Nb–OH complex formation in aqueous, solid and surface phases.


2015 ◽  
Vol 77 (2) ◽  
pp. 145-147
Author(s):  
Lyn L. Countryman ◽  
Jill D. Maroo

Considerable anecdotal evidence indicates that some of the most difficult concepts that both high school and undergraduate elementary-education students struggle with are those surrounding evolutionary principles, especially speciation. It’s no wonder that entry-level biology students are confused, when biologists have multiple definitions of “species.” We developed this speciation activity to provide clarity and allow students a hands-on experience with a speciation model.


2016 ◽  
Vol 32 (3) ◽  
pp. 221-237 ◽  
Author(s):  
Qingpeng Meng ◽  
Jing Zhang ◽  
Jicheng Feng ◽  
Zhaoyu Zhang ◽  
Tairan Wu

2016 ◽  
Vol 13 (10) ◽  
pp. 2901-2911 ◽  
Author(s):  
Torsten Hauffe ◽  
Christian Albrecht ◽  
Thomas Wilke

Abstract. The Balkan Lake Ohrid is the oldest and most diverse freshwater lacustrine system in Europe. However, it remains unclear whether species community composition, as well as the diversification of its endemic taxa, is mainly driven by dispersal limitation, environmental filtering, or species interaction. This calls for a holistic perspective involving both evolutionary processes and ecological dynamics, as provided by the unifying framework of the “metacommunity speciation model”.The current study used the species-rich model taxon Gastropoda to assess how extant communities in Lake Ohrid are structured by performing process-based metacommunity analyses. Specifically, the study aimed (1) to identifying the relative importance of the three community assembly processes and (2) to test whether the importance of these individual processes changes gradually with lake depth or discontinuously with eco-zone shifts.Based on automated eco-zone detection and process-specific simulation steps, we demonstrated that dispersal limitation had the strongest influence on gastropod community composition. However, it was not the exclusive assembly process, but acted together with the other two processes – environmental filtering and species interaction. The relative importance of the community assembly processes varied both with lake depth and eco-zones, though the processes were better predicted by the latter.This suggests that environmental characteristics have a pronounced effect on shaping gastropod communities via assembly processes. Moreover, the study corroborated the high importance of dispersal limitation for both maintaining species richness in Lake Ohrid (through its impact on community composition) and generating endemic biodiversity (via its influence on diversification processes). However, according to the metacommunity speciation model, the inferred importance of environmental filtering and biotic interaction also suggests a small but significant influence of ecological speciation. These findings contribute to the main goal of the Scientific Collaboration on Past Speciation Conditions in Lake Ohrid (SCOPSCO) deep drilling initiative – inferring the drivers of biotic evolution – and might provide an integrative perspective on biological and limnological dynamics in ancient Lake Ohrid.


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