scholarly journals SAPP: functional genome annotation and analysis through a semantic framework using FAIR principles

2018 ◽  
Author(s):  
P.J. Schaap
Keyword(s):  
Genome Annotation ◽  
Semantic Framework ◽  
Fair Principles ◽  
Functional Genome Annotation ◽  
Functional Genome

scholarly journals SAPP: functional genome annotation and analysis through a semantic framework using FAIR principles

2017 ◽  
Vol 34 (8) ◽  
pp. 1401-1403 ◽  
Author(s):  
Jasper J Koehorst ◽  
Jesse C J van Dam ◽  
Edoardo Saccenti ◽  
Vitor A P Martins dos Santos ◽  
Maria Suarez-Diez ◽  
...  
Keyword(s):  
Genome Annotation ◽  
Semantic Framework ◽  
Fair Principles ◽  
Functional Genome Annotation ◽  
Functional Genome

scholarly journals Genomic Resources for Gene Discovery, Functional Genome Annotation, and Evolutionary Studies of Maize and Its Close Relatives

Genetics ◽  
2013 ◽  
Vol 195 (3) ◽  
pp. 723-737 ◽  
Author(s):  
Chao Wang ◽  
Xue Shi ◽  
Lin Liu ◽  
Haiyan Li ◽  
Jetty S.S. Ammiraju ◽  
...  
Keyword(s):  
Genome Annotation ◽  
Gene Discovery ◽  
Genomic Resources ◽  
Evolutionary Studies ◽  
Close Relatives ◽  
Functional Genome Annotation ◽  
Functional Genome

Functional genome annotation depicts probiotic properties of Bacillus velezensis FTC01

Gene ◽  
2019 ◽  
Vol 713 ◽  
pp. 143971 ◽  
Author(s):  
Jamile Queiroz Pereira ◽  
Ana Carolina Ritter ◽  
Samuel Cibulski ◽  
Adriano Brandelli
Keyword(s):  
Genome Annotation ◽  
Probiotic Properties ◽  
Bacillus Velezensis ◽  
Functional Genome Annotation ◽  
Functional Genome

Functional genome annotation through phylogenomic mapping

2005 ◽  
Vol 23 (6) ◽  
pp. 691-698 ◽  
Author(s):  
Balaji S Srinivasan ◽  
Nora B Caberoy ◽  
Garret Suen ◽  
Rion G Taylor ◽  
Radhika Shah ◽  
...  
Keyword(s):  
Genome Annotation ◽  
Functional Genome Annotation ◽  
Functional Genome

scholarly journals Assembly and Analysis of the Genome Sequence of the Yeast Brettanomyces naardenensis CBS 7540

2019 ◽  
Vol 7 (11) ◽  
pp. 489 ◽  
Author(s):  
Ievgeniia A. Tiukova ◽  
Huifeng Jiang ◽  
Jacques Dainat ◽  
Marc P. Hoeppner ◽  
Henrik Lantz ◽  
...  
Keyword(s):  
Genome Annotation ◽  
Biotechnological Applications ◽  
Genetic Determinants ◽  
Alcohol Content ◽  
Protein Coding ◽  
Biotechnological Potential ◽  
High Attenuation ◽  
Spoilage Yeast ◽  
Functional Genome Annotation ◽  
Low Alcohol

Brettanomyces naardenensis is a spoilage yeast with potential for biotechnological applications for production of innovative beverages with low alcohol content and high attenuation degree. Here, we present the first annotated genome of B. naardenensis CBS 7540. The genome of B. naardenensis CBS 7540 was assembled into 76 contigs, totaling 11,283,072 nucleotides. In total, 5168 protein-coding sequences were annotated. The study provides functional genome annotation, phylogenetic analysis, and discusses genetic determinants behind notable stress tolerance and biotechnological potential of B. naardenensis.

VIVO: A Semantic Framework for Interdisciplinary Research

2012 ◽  
Author(s):  
Hal Warren ◽  
Jon Corson-Rikert ◽  
Gary Vandenbos ◽  
Kristi Holmes ◽  
Eva Winer
Keyword(s):  
Interdisciplinary Research ◽  
Semantic Framework
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