scholarly journals Preparation of 5M Guanidine thiocyanate L6 Inactivation Buffer v1 (protocols.io.bfevjje6)

protocols.io ◽  
2020 ◽  
Author(s):  
Nicola O ◽  
Svend Kjaer
2017 ◽  
Vol 38 (4) ◽  
pp. 2201 ◽  
Author(s):  
Gabrielle Silveira de Campos ◽  
Ricardo Antônio Ayub ◽  
Rafael Mazer Etto ◽  
Carolina Weigert Galvão ◽  
Marília Aparecida Stroka ◽  
...  

Melon, a member of the family Cucurbitaceae, is the fourth most important fruit in the world market and, on a volume basis, is Brazil’s main fresh fruit export. Many molecular techniques used to understand the maturation of these fruits require high concentrations of highly purified RNA. However, melons are rich in polyphenolic compounds and polysaccharides, which interfere with RNA extraction. This study aimed to determine the most appropriate method for total RNA extraction from melon fruits. Six extraction buffers were tested: T1) guanidine thiocyanate/phenol/chloroform; T2) sodium azide/?-mercaptoethanol; T3) phenol/guanidine thiocyanate; T4) CTAB/PVP/?-mercaptoethanol; T5) SDS/sodium perchlorate/PVP/?-mercaptoethanol, and T6) sarkosyl/PVP/guanidine thiocyanate, using the AxyPrepTM Multisource Total RNA Miniprep Kit. The best method for extracting RNA from both mature and green fruit was based on the SDS/PVP/?-mercaptoethanol buffer, because it rapidly generated a high quality and quantity of material. In general, higher amounts of RNA were obtained from green than mature fruits, probably due to the lower concentration of polysaccharides and water. The purified material can be used as a template in molecular techniques, such as microarrays, RT-PCR, and in the construction of cDNA and RNA-seq data.


2016 ◽  
Vol 06 (05) ◽  
Author(s):  
Colin B Page ◽  
Peter S Kruger ◽  
Goce Dimeski ◽  
James Walsham

Gut ◽  
2016 ◽  
Vol 65 (9) ◽  
pp. 1574-1575 ◽  
Author(s):  
Yuichiro Nishimoto ◽  
Sayaka Mizutani ◽  
Takeshi Nakajima ◽  
Fumie Hosoda ◽  
Hikaru Watanabe ◽  
...  

2012 ◽  
Vol 27 ◽  
pp. 381-386
Author(s):  
Olesya V. Stepanenko ◽  
Olga V. Stepanenko ◽  
Irina M. Kuznetsova ◽  
Vladyslav V. Verkhusha ◽  
Konstantin K. Turoverov

The guanidine-thiocyanate-induced denaturation-renaturation of sfGFP was studied. It was shown that the disruption of sfGFP native structure occurs in the range of guanidine thiocyanate concentrations from 0.5 to 2.5 M. This process was accompanied by simultaneous changes of all recorded parameters. It was found that the small guanidine thiocyanate concentrations (less then 0.1-0.2 M) triggered local structural disturbances in protein which result in significant decrease of chromophore and tryptophan fluorescence intensity and change of protein visible absorption spectrum.


2004 ◽  
Vol 378 (1) ◽  
pp. 134-143 ◽  
Author(s):  
Wes W. C. Quigley ◽  
Emilia Bramanti ◽  
Bethany A. Staggemeier ◽  
Keith E. Miller ◽  
Abdul Nabi ◽  
...  

2006 ◽  
Vol 32 (6) ◽  
pp. 547-551 ◽  
Author(s):  
A. V. Kravchenko ◽  
E. V. Chetverina ◽  
A. B. Chetverin

PLoS ONE ◽  
2012 ◽  
Vol 7 (11) ◽  
pp. e48809 ◽  
Author(s):  
Olesya V. Stepanenko ◽  
Olga V. Stepanenko ◽  
Irina M. Kuznetsova ◽  
Daria M. Shcherbakova ◽  
Vladislav V. Verkhusha ◽  
...  

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