Molecular Recognition of Organic Compounds by Imprinted Silica

1999 ◽  
Vol 604 ◽  
Author(s):  
Xiaoyi Gong ◽  
Jun Liu ◽  
William D. Samuels

AbstractSpecific interactions between silica and organic molecules play an important role in molecular imprinting, molecular recognition, and enzyme activity. To understand the specific interactions, six pairs of organic compounds were chosen and investigated for their molecular imprinting capabilities on silica. Silica adsorbents imprinted by methyl red or ρ-methyl red, methyl orange or ethyl orange, and histidine-alanine or histidine-leucine can recognize their imprinting molecules. Silica samples “imprinted” with methyl red or ethyl red, 4,9-diaminoflourenone or 3,3'-diaminodiphenylmethane, and l-histidine or d,l-histidine do not recognize their “imprinting” molecules. The molecular recognition is related to the structure of the imprinting molecules. The following lessons were learnt: 1) Three or more strong interaction sites on the imprinting molecules are necessary to endow silica with recognition capability; 2) Position of functional groups is more important than their size to achieve the molecular recognition; 3) Chiral recognition needs stronger interaction and/or more interaction sites

2000 ◽  
Vol 65 (1) ◽  
pp. 47-57 ◽  
Author(s):  
Pavel Hradil ◽  
Jiří Votinský ◽  
Karel Komárek ◽  
Vítězslav Zima ◽  
Jaroslava Kalousová ◽  
...  

Gas chromatographic measurement of specific retention volumes of vapours of selected groups of organic compounds has been used to determine differential molar enthalpy of adsorption of their molecules on the surface of layered vanadyl phosphate substituted with ferric ions having the composition of [Fe(H2O)]0.20(VO)0.80PO4. Various types of bonds of the molecules to the surface of the layered adsorbent including their probable orientation with respect to the layers have been discussed. It was observed a dependence of the specific peak elution volume and shape of chromatographic peak on the sample size in the cases of those compounds whose molecules are chemically bound to the adsorbent surface. A connection is pointed out between the adsorption strength of the organic molecules on the layered adsorbent and the tendency of the system to undergo intercalation reaction.


2014 ◽  
Vol 5 (16) ◽  
pp. 4764-4771 ◽  
Author(s):  
Yuri Kamon ◽  
Ryo Matsuura ◽  
Yukiya Kitayama ◽  
Tooru Ooya ◽  
Toshifumi Takeuchi

We demonstrate a novel synthetic route for molecularly imprinted polymer (MIP) thin films using a bottom-up approach utilizing protein–ligand specific interactions.


2001 ◽  
Vol 19 (3) ◽  
pp. 237-244 ◽  
Author(s):  
Nikolai V. Nikolenko

The energies of unoccupied and occupied orbitals were used as the correlation parameters between the electronic and adsorptive properties of organic molecules. A model describing the chemisorption of organic compounds on CaCO3 involving two types of interaction, i.e. two-electron, donor–acceptor interaction HOMO(adsorbent) → LUMO(adsorbate) and four-electron, three-orbital interaction HOMO(adsorbent) → {LUMO(adsorbate) + HOMO(adsorbate)}, was proposed. It was concluded that strengthening of the bond involved in chemisorption occurred if the energies of the occupied orbitals associated with the adsorbate and adsorbent were concurrent.


2021 ◽  
Author(s):  
Teresa Fornaro ◽  
Giovanni Poggiali ◽  
Maria Angela Corazzi ◽  
Cristina Garcia ◽  
Giulia Dimitri ◽  
...  

<div> </div> <p><strong>Abstract</strong></p> <p>We present laboratory activities of preparation, characterization, and UV irradiation processing of Mars soil analogues, which are key to support both in situ exploration and sample return missions devoted to detection of molecular biosignatures on Mars.</p> <p>In detail we prepared analog mineral samples relevant to the landing sites of past, present and future Mars exploration missions, such as Gale Crater, Jezero Crater, and Oxia Planum. We doped these samples with a large variety of organic molecules (both biotic and prebiotic molecules) like amino acids, nucleotides, monosaccharides, aldehydes, lipids. We investigated molecular photostability under UV irradiation by monitoring in situ possible modifications of infrared spectroscopic features. These investigations provide pivotal information for ground analysis carried out by rovers on Mars.</p> <p><strong>Introduction</strong></p> <p>Laboratory simulations of Mars are key to support the scientific activity and technology development of life detection instruments on board present and upcoming rover missions such as Mars2020 Perseverance [1] and ExoMars2022 Rosalind Franklin [2]. Studies about the stability of organic molecules in a Martian-like environment allow us to explore the conditions for the preservation of molecular biosignatures and develop models for their degradation in the Martian geological record. A systematic study of the effects of UV radiation on a variety of molecule-mineral complexes mimicking Martian soil can be key for the selection of the most interesting samples to analyse in situ or/and collect for sample return. Testing the sensitivity of different techniques for detection of the diagnostic features of molecular biosignatures embedded into mineral matrices as a function of the molecular concentration helps the choice, design and operation of flight instruments, as well as the interpretation of data collected on the ground during mission operative periods.</p> <p><strong>Methods</strong></p> <p>Experimental analyses were conducted in the Astrobiology Laboratory at INAF-Astrophysical Observatory of Arcetri (Firenze, Italy). Laboratory activities pertain to: (i) synthesis of Mars soil analogues doped with organic compounds that are considered potential molecular biosignatures; (ii) UV-irradiation processing of the Mars soil analogues under Martian-like conditions; and (iii) spectroscopic characterization of the Mars soil analogues.</p> <p><strong>Results</strong></p> <p>Such studies have shown to be very informative in identifying mineral deposits most suitable for preservation of organic compounds, while highlighting the complementarity of different techniques for biomarkers detection, which is critical for ensuring the success of space missions devoted to the search for signs of life on Mars.</p> <p>We will present a series of laboratory results on molecular degradation caused by UV on Mars and possible application to detection of organics by Martian rovers [3,4,5,6]. In detail, we investigated the photostability of several amino acids like glycine, alanine, methionine, valine, tryptophan, phenylalanine, glutamic acid, prebiotic molecules like urea, deoxyribose and glycolaldehyde, and biomarkers like nucleotides and phytane adsorbed on relevant Martian analogs. We monitored the degradation of these molecule-mineral complexes through in situ spectroscopic analysis, investigating the reflectance properties of the samples in the NIR/MIR spectral region. Such spectroscopic characterization of molecular alteration products provides support for two upcoming robotic missions to Mars that will employ NIR spectroscopy to look for molecular biosignatures, through the instruments SuperCam on board Mars 2020, ISEM, Ma_MISS and MicrOmega on board ExoMars 2022.</p> <p><strong>Acknowledgements</strong></p> <p>This research was supported by the Italian Space Agency (ASI) grant agreement ExoMars n. 2017-48-H.0.</p> <p><strong>References</strong></p> <p>[1] Farley K. A. et al. (2020) Space Sci. Rev. 216, 142.</p> <p>[2] Vago, J. L. et al. (2017) Astrobiology 6, 309–347.</p> <p>[3] Fornaro T. et al. (2013) Icarus 226, 1068–1085.</p> <p>[4] Fornaro T. et al. (2018) Icarus 313, 38-60.</p> <p>[5] Fornaro T. et al. (2020) Front. Astron. Space Sci. 7:539289.</p> <p>[6] Poggiali G. et al. (2020) Front. Astron. Space Sci. 7:18.</p>


The Analyst ◽  
2020 ◽  
Vol 145 (20) ◽  
pp. 6668-6676
Author(s):  
Sitanan Sartyoungkul ◽  
Isaya Thaveesangsakulthai ◽  
Mark Kristan Espejo Cabello ◽  
Chadin Kulsing ◽  
Hidehiro Sakurai

Chiral cup-shaped trilactams were used as liquid phase extraction material of volatile organic compounds in perfume analyzed by SPME GC-MS. (+)-material showed higher selective chiral recognition with oxygenated and cyclic volatile compounds.


2019 ◽  
Vol 48 (4) ◽  
pp. 1179-1183 ◽  
Author(s):  
Mingxue Yang ◽  
Xiao-Ning Li ◽  
Ji-Hui Jia ◽  
Xu-Lin Chen ◽  
Can-Zhong Lu

We designed a sensor compound which for the first time combines the solvent effect of ICT organic molecules with large channels adsorbing VOCs.


2020 ◽  
Vol 500 (1) ◽  
pp. 1188-1200
Author(s):  
Killian Leroux ◽  
Lahouari Krim

ABSTRACT Methanol, which is one of the most abundant organic molecules in the interstellar medium, plays an important role in the complex grain surface chemistry that is believed to be a source of many organic compounds. Under energetic processing such as ultraviolet (UV) photons or cosmic rays, methanol may decompose into CH4, CO2, CO, HCO, H2CO, CH3O and CH2OH, which in turn lead to complex organic molecules such as CH3OCHO, CHOCH2OH and HOCH2CH2OH through radical recombination reactions. However, although molecular oxygen and its detection, abundance and role in the interstellar medium have been the subject of many debates, few experiments on the oxidation of organic compounds have been carried out under interstellar conditions. The present study shows the behaviour of solid methanol when treated by UV light and thermal processing in oxygen-rich environments. Methanol has been irradiated in the absence and presence of O2 at different concentrations in order to study how oxidized complex organic molecules may form and also to investigate the O-insertion reaction in the C–H bound to form methanediol HOCH2OH through a CH3OH + O(1D) solid-state reaction. The adding of O2 in the thermal and photochemical reaction of solid methanol leads to the formation of O3, H2O and HO2, in addition to three main organics, HCOOH, CHOCHO and HOCH2OH. We show that in an O2-rich environment, species such as CO, CH4, HCO, CH3OH and CHOCH2OH are oxidized into CO2, CH3OH, HC(O)OO, HOCH2OH and CHOCHO, respectively, while HCOOH might be formed through the H2CO + O(3P) → (OH + HCO)cage → HCOOH hydrogen-abstraction reaction.


Elements ◽  
2020 ◽  
Vol 16 (1) ◽  
pp. 25-31 ◽  
Author(s):  
Eoghan P. Reeves ◽  
Jens Fiebig

Accumulation of molecular hydrogen in geologic systems can create conditions energetically favorable to transform inorganic carbon into methane and other organic compounds. Although hydrocarbons with a potentially abiotic origin have been proposed to form in a number of crustal settings, the ubiquitous presence of organic compounds derived from biological organic matter presents a challenge for unambiguously identifying abiotic organic molecules. In recent years, extensive analysis of methane and other organics in diverse geologic fluids, combined with novel isotope analyses and laboratory simulations, have, however, yielded insights into the distribution of specific abiotic organic molecules in Earth’s lithosphere and the likely conditions and pathways under which they form.


Sign in / Sign up

Export Citation Format

Share Document