Detection and Identification of Microbes Using Mass Spectrometry Proteomics

Author(s):  
Charles Wick
Metabolites ◽  
2021 ◽  
Vol 11 (2) ◽  
pp. 66
Author(s):  
Juliet Kinyua ◽  
Aikaterini K. Psoma ◽  
Nikolaos I. Rousis ◽  
Maria-Christina Nika ◽  
Adrian Covaci ◽  
...  

There is a paucity of information on biotransformation and stability of new psychoactive substances (NPS) in wastewater. Moreover, the fate of NPS and their transformation products (TPs) in wastewater treatment plants is not well understood. In this study, batch reactors seeded with activated sludge were set up to evaluate biotic, abiotic, and sorption losses of p-methoxymethylamphetamine (PMMA) and dihydromephedrone (DHM) and identify TPs formed during these processes. Detection and identification of all compounds was performed with target and suspect screening approaches using liquid chromatography quadrupole-time-of-flight mass spectrometry. Influent and effluent 24 h composite wastewater samples were collected from Athens from 2014 to 2020. High elimination rates were found for PMMA (80%) and DHM (97%) after a seven-day experiment and degradation appeared to be related to biological activity in the active bioreactor. Ten TPs were identified and the main reactions were O- and N-demethylation, oxidation, and hydroxylation. Some TPs were reported for the first time and some were confirmed by reference standards. Identification of some TPs was enhanced by the use of an in-house retention time prediction model. Mephedrone and some of its previously reported human metabolites were formed from DHM incubation. Retrospective analysis showed that PMMA was the most frequently detected compound.


2019 ◽  
Vol 108 ◽  
pp. 02005
Author(s):  
Natalia Kmiecik ◽  
Krzysztof Jurek ◽  
Adam Kowalski

Soil contamination with petroleum-derived compounds is one of the most serious ecological problems. Their main source in urbanized areas is public transport. According to the Regulation of the Polish Minister of Environment about the assessment of earth’s surface contamination, hydrocarbon compounds are divided into: gasolines and oils, aromatic hydrocarbons and polycyclic aromatic hydrocarbons (PAHs). The subject of the research is the use of a gas chromatography coupled with mass spectrometry (GC-MS) method to assess the degree of soil contamination in the vicinity of the main communication routes of the Kielce agglomeration. This method is useful for the detection and identification of many organic compounds occurring in samples in very small quantities, which cannot be determined by common methods. For the purpose of this study, 14 soil samples were collected. After carrying out extraction with various methods, the ultrasonic solvent extraction method was chosen as the most effective way of extracting hydrocarbon impurities for the GC-MS studies. During single analysis, both oil fraction and PAHs quantities were determined.


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