Karyotype Analysis of Four Blind Snake Species (Reptilia: Squamata: Scolecophidia) and Karyotypic Changes in Serpentes

2019 ◽  
Vol 157 (1-2) ◽  
pp. 98-106 ◽  
Author(s):  
Kazumi Matsubara ◽  
Yoshinori Kumazawa ◽  
Hidetoshi Ota ◽  
Chizuko Nishida ◽  
Yoichi Matsuda
Keyword(s):  
Chromosome Numbers ◽  
Chromosome Pair ◽  
Karyotype Evolution ◽  
Karyotype Analysis ◽  
Early Stage ◽  
Gene Location ◽  
Z Chromosome ◽  
Chromosome 4 ◽  
Broad Distribution ◽  
Chromosome Fusions

The suborder Serpentes is divided into 2 infraorders, Scolecophidia and Alethinophidia, which diverged at an early stage of snake diversification. In this study, we examined karyotypes of 4 scolecophidian species (Letheobia simonii, Xerotyphlops vermicularis, Indotyphlops braminus, and Myriopholis macrorhyncha) and performed FISH with 18S-28S rDNA as well as microchromosomal and Z chromosome-linked genes of Elaphe quadrivirgata (Alethinophidia) to investigate the karyotype evolution in the scolecophidian lineage. Diploid chromosome numbers of X. vermicularis and L. simonii were 30 (16 macrochromosomes and 14 microchromosomes) and 32 (16 macrochromosomes and 16 microchromosomes), respectively. The karyotype of a female M. macrorhyncha consisted of 15 macrochromosomes and 19 microchromosomes, including a heterochromatic microchromosome, indicating the presence of a heteromorphic chromosome pair. E. quadrivirgata Z-linked genes mapped to chromosome 4 of M. macrorhyncha, not to the heteromorphic pair. Therefore, M. macrorhyncha may have differentiated ZW sex chromosomes which are not homologous to those of E. quadrivirgata. One of the E. quadrivirgata microchromosomal genes mapped to the terminal region of chromosome 4q in X. vermicularis, suggesting that fusions between microchromosomes and macrochromosomes occurred in this species. rDNA was localized in different macrochromosomal pairs in the 2 diploid scolecophidian snakes examined here, whereas the gene location in a microchromosomal pair was conserved in 5 alethinophidian species examined. These results might imply the occurrence of chromosome fusions in the scolecophidian lineages. In I. braminus, a unique parthenogenetic snake with a triploid karyotype (21 macrochromosomes and 21 microchromosomes), morphological heteromorphisms were identified in chromosomes 1 and 7. Such heteromorphisms in 2 chromosomes were also observed in individuals from distant locations in the broad distribution range of this species, suggesting that the heteromorphisms were fixed in the genome at an early stage of its speciation.

scholarly journals Karyotype analysis and karyological relationships of Turkish Bunium species (Apiaceae)

2020 ◽  
Vol 72 (2) ◽  
pp. 203-209
Author(s):  
Mustafa Çelik ◽  
Yavuz Bağcı ◽  
Esra Martin ◽  
Halil Eroğlu
Keyword(s):  
Ploidy Level ◽  
Chromosome Numbers ◽  
Karyotype Evolution ◽  
Karyotype Analysis ◽  
The Other ◽  
Monophyletic Group ◽  
Polyploid Species ◽  
Chromosomal Data ◽  
Group B ◽  
First Time

Chromosomal data and karyological relationships provide valuable information about karyotype evolution and speciation. For the genus Bunium, the chromosomal data are limited. In the present study, the chromosomal data of 10 taxa are provided, 6 of which are given for the first time, 2 present new chromosome numbers, and 2 agree with previous reports. Four different chromosome numbers (2n=18, 20, 22 and 40) were detected, and 2n=40 is a new number in the genus Bunium. B. brachyactis is the first polyploid species of the genus with a ploidy level of 4x. The most asymmetric karyotypes are those of B. pinnatifolium and B. sayae. Regarding karyological relationships, B. pinnatifolium forms a monophyletic group by quite different karyological features such as large chromosomes, more submedian chromosomes and the most asymmetric karyotypes. In addition, the other 5 taxa form a strong monophyletic group. B. verruculosum and B. ferulaceum are cytotaxonomically very close species, as are B. sayae and B. elegans var. elegans. The chromosome numbers of 2 Turkish species, B. nudum and B. sivasicum, remain unknown. The presented results provide important contributions to the cytotaxonomy of Bunium.

Karyotype evolution and chromosome numbers in Chrysopsis (Nutt.) Ell. sensu Semple (Compositae–Astereae)

1980 ◽  
Vol 58 (2) ◽  
pp. 164-171 ◽  
Author(s):  
J. C. Semple ◽  
C. C. Chinnappa
Keyword(s):  
Chromosome Numbers ◽  
Karyotype Evolution ◽  
Organizer Region ◽  
Nucleolar Organizer Region ◽  
Nucleolar Organizer ◽  
Acrocentric Chromosomes

The karyotypes of all species of Chrysopsis were analysed and four basic complements were recognised. The X = 5 karyotype was possessed by all seven n = 5 species and consisted of three submetacentric and two acrocentric chromosomes, one bearing the nucleolar organizer region medially on its short arm. Each X = 4 species had a distinct karyotype. The n = 4 karyotype of C. mariana had diverged less from the X = 5 karyotype than that of C. pilosa. The X2 = 9 karyotype shared by three n = 9 taxa was found to be little more than a combination of the X = 5 karyotype and the X = 4 mariana karyotype and was therefore of allopolyploid origin. Some shifting in the location of the nucleolar organizer region has occurred in each group.

scholarly journals Descending Dysploidy and Bidirectional Changes in Genome Size Accompanied Crepis (Asteraceae) Evolution

Genes ◽  
2021 ◽  
Vol 12 (9) ◽  
pp. 1436
Author(s):  
Magdalena Senderowicz ◽  
Teresa Nowak ◽  
Magdalena Rojek-Jelonek ◽  
Maciej Bisaga ◽  
Laszlo Papp ◽  
...  
Keyword(s):  
Genome Size ◽  
Dna Sequences ◽  
Chromosome Numbers ◽  
Karyotype Evolution ◽  
Base Number ◽  
Ancestral State ◽  
Ancestral Genome ◽  
Independent Events ◽  
Karyotype Asymmetry ◽  
Major Direction

The evolution of the karyotype and genome size was examined in species of Crepis sensu lato. The phylogenetic relationships, inferred from the plastid and nrITS DNA sequences, were used as a framework to infer the patterns of karyotype evolution. Five different base chromosome numbers (x = 3, 4, 5, 6, and 11) were observed. A phylogenetic analysis of the evolution of the chromosome numbers allowed the inference of x = 6 as the ancestral state and the descending dysploidy as the major direction of the chromosome base number evolution. The derived base chromosome numbers (x = 5, 4, and 3) were found to have originated independently and recurrently in the different lineages of the genus. A few independent events of increases in karyotype asymmetry were inferred to have accompanied the karyotype evolution in Crepis. The genome sizes of 33 Crepis species differed seven-fold and the ancestral genome size was reconstructed to be 1 C = 3.44 pg. Both decreases and increases in the genome size were inferred to have occurred within and between the lineages. The data suggest that, in addition to dysploidy, the amplification/elimination of various repetitive DNAs was likely involved in the genome and taxa differentiation in the genus.

scholarly journals Karyotype analysis and chromosome number for two Cirsium taxa (Asteraceae) in Iran

Turczaninowia ◽  
2021 ◽  
Vol 24 (1) ◽  
pp. 83-88
Author(s):  
Zohreh Babaee ◽  
Maryam Norouzi ◽  
Samaneh Mosaferi ◽  
Maryam Keshavarzi
Keyword(s):  
Chromosome Numbers ◽  
Mitotic Chromosome ◽  
Karyotype Analysis ◽  
Chromosome Length ◽  
B Chromosomes ◽  
Chromosome Type ◽  
Population Total ◽  
Ploidy Levels ◽  
Class B ◽  
Karyotype Analyses

Cirsium Mill. contains more than 250 species in the world mainly distributed in the Northern hemisphere. Different chromosome numbers with different ploidy levels were reported in this genus. In this study, karyotype details and chromosome numbers were established for two Cirsium taxa in Iran. C. ciliatum subsp. szovitsii and C. echinus had the mitotic chromosome numbers of 2n = 2x = 34. Karyotype analyses showed that chromosomes were generally metacentric and sub-metacentric. In C. echinus, Lowshan population had the longest chromosome (19.10 µm) and Heyran Canyon population (4.73 µm) the shortest one while in C. ciliatum, the longest chromosome was observed in Urmia to Salmas population (14.67 µm) and the shortest one (4.71 µm) in Doshanlu population. Total haploid chromosome length ranged from 275.29 to 376.42 µm in populations studied. Both taxa were grouped in 2B class. B-chromosomes were recorded for two taxa studied too. Chromosome type, mitotic chromosome numbers and occurrence of B-chromosomes were in agreement with previous results (Albers, Pröbsting, 1998; Lövkvist, Hultgård, 1999; Yüksel et al., 2013; Yildiz et al., 2016).

scholarly journals Karyotype Analysis of Alnus Mill. (Betulaceae) Species Originating From Northeastern Asia

2010 ◽  
Vol 59 (1-6) ◽  
pp. 219-223 ◽  
Author(s):  
Liu Jun ◽  
Ren Bao-Qing ◽  
Luo Peigao ◽  
Ren Zhenglong
Keyword(s):  
Chromosome Number ◽  
Chromosome Numbers ◽  
Karyotype Analysis ◽  
Full Potential ◽  
Northeastern Asia ◽  
Ploidy Levels ◽  
Genetic Makeup ◽  
Fossil Records

Abstract Alnus Mill. (alder) is an ecologically valuable tree genus. It is essential to study its genetic makeup in order to use alder trees to their full potential. Five specimens from four Alnus species (A. mandshurica, A. pendula, A. sibirica, and A. sieboldiana), found in northeastern Asia, were subjected to karyotype analysis. The analysis showed that these tree samples could be divided into three categories based on chromosome numbers or ploidy levels: viz., 2n = (4x) = 28, 2n = (8x) = 56 and 2n = (16x) = 112. The differences in chromosome number and karyotype parameters among Alnus species and even within the same species possibly resulted from natural polyploidization. Comparing the chromosome numbers of Alnus species in China with those in Japan showed that there appear to be only two categories in China, whereas there are up to five categories in Japan. The earliest fossil records of Alnus pollen were also discovered in Japan. We conclude that the center origin of Alnus spp. is Japan rather than China.

Karyotype Evolution and Distinct Evolutionary History of the W Chromosomes in Swallows (Aves, Passeriformes)

2019 ◽  
Vol 158 (2) ◽  
pp. 98-105 ◽  
Author(s):  
Suziane A. Barcellos ◽  
Rafael Kretschmer ◽  
Marcelo S. de Souza ◽  
Alice L. Costa ◽  
Tiago M. Degrandi ◽  
...  
Keyword(s):  
Dna Sequences ◽  
Evolutionary History ◽  
Karyotype Evolution ◽  
Sex Chromosome ◽  
Repetitive Sequences ◽  
Z Chromosome ◽  
W Chromosome ◽  
The Family ◽  
Agnor Staining ◽  
History Of

As in many other bird groups, data on karyotype organization and distribution of repetitive sequences are also lacking in species belonging to the family Hirundinidae. Thus, in the present study, we analyzed the karyotypes of 3 swallow species (Progne tapera, Progne chalybea, and Pygochelidon cyanoleuca) by Giemsa and AgNOR staining, C-banding, and FISH with 11 microsatellite sequences. The diploid chromosome number was 2n = 76 in all 3 species, and NORs were observed in 2 chromosome pairs each. The microsatellite distribution pattern was similar in both Progne species, whereas P. cyanoleuca presented a distinct organization. These repetitive DNA sequences were found in the centromeric, pericentromeric, and telomeric regions of the macrochromosomes, as well as in 2 interstitial blocks in the W chromosome. Most microchromosomes had mainly telomeric signals. The Z chromosome displayed 1 hybridization signal in P. tapera but none in the other species. In contrast, the W chromosome showed an accumulation of different microsatellite sequences. The swallow W chromosome is larger than that of most Passeriformes. The observed enlargement in chromosome size might be explained by these high amounts of repetitive sequences. In sum, our data highlight the significant role that microsatellite sequences may play in sex chromosome differentiation.

scholarly journals Karyotype evolution and flexible (conventional versus inverted) meiosis in insects with holocentric chromosomes: a case study based on Polyommatus butterflies

2020 ◽  
Vol 130 (4) ◽  
pp. 683-699 ◽  
Author(s):  
Vladimir A Lukhtanov ◽  
Alexander V Dantchenko ◽  
Fayzali R Khakimov ◽  
Damir Sharafutdinov ◽  
Elena A Pazhenkova
Keyword(s):  
Brownian Motion ◽  
Chromosome Numbers ◽  
Karyotype Evolution ◽  
Chromosome Length ◽  
Holocentric Chromosomes ◽  
Motion Model ◽  
Kinetic Activity ◽  
Number Variation ◽  
Brownian Motion Model ◽  
Gradual Accumulation

Abstract The Polyommatus butterflies have holocentric chromosomes, which are characterized by kinetic activity distributed along the entire chromosome length, and the highest range of haploid chromosome numbers (n) known within a single eukaryotic genus (from n = 10 to n = 226). Previous analyses have shown that these numbers most likely evolved gradually from an ancestral karyotype, in accordance with the Brownian motion model of chromosome change accumulation. Here we studied chromosome sets within a monophyletic group of previously non-karyotyped Polyommatus species. We demonstrate that these species have a limited interspecific chromosome number variation from n = 16 to n = 25, which is consistent with the Brownian motion model prediction. We also found intra- and interpopulation variation in the chromosome numbers. These findings support the model of karyotype evolution through the gradual accumulation of neutral or weakly underdominant rearrangements that can persist in the heterozygous state within a population. For Polyommatus poseidonides we report the phenomenon of flexible meiosis in which the chromosome multivalents are able to undergo either conventional or inverted meiosis within the same individual. We hypothesise that the ability to invert the order of the meiotic events may be adaptive and can facilitate proper chromosome segregation in chromosomal heterozygotes, thus promoting rapid karyotype evolution.

Karyotype, C-banding, and Ag-NOR analysis in Diplodus bellottii (Sparidae, Perciforms). Intra-individual polymorphism involving heterochromatic regions

Genome ◽  
1993 ◽  
Vol 36 (4) ◽  
pp. 672-675 ◽  
Author(s):  
A. Amores ◽  
G. Martinez ◽  
J. Reina ◽  
M. C. Alvarez
Keyword(s):  
Karyotype Evolution ◽  
Karyotype Analysis ◽  
Centric Fusion ◽  
Active Regions ◽  
Chromosome Polymorphism ◽  
Terminal Position ◽  
C Banding ◽  
Metacentric Pair ◽  
Pericentric Inversions ◽  
Nucleolus Organizers

A karyotype analysis was carried out in nine specimens of the Sparid species Diplodus bellottii using conventional staining, as well as C-banding and Ag-NOR banding techniques, showing, respectively, 2n = 46 and fundamental number (FN) = 54, and scarce heterochromatic areas irregularly distributed and up to four NOR active regions that were C positive. When compared with the karyotypes of other related species, one centric fusion giving rise to a large metacentric pair and several pericentric inversions seem to have been involved in the karyotype evolution. An intra-individual polymorphism was detected in one specimen, resulting in two karyotypic forms in roughly identical proportion, owing to a larger C-band by the NOR regions, appearing either in a terminal position of the short arms of pair 2 or in telomeric position of pair 3. These findings suggest that the extra heterochromatic segment responsible for the heteromorphism apparently only involves associated heterochromatin and not the NORs themselves. This C-positive block seems to have eventually been transferred between heterologous NOR chromosomes by a somatic event, facilitated by the physical proximity of NOR pairs in the nucleolus.Key words: Sparidae, karyotype, heterochromatin, nucleolus organizers, chromosome polymorphism.

Variability of C-banding patterns in Japanese quail chromosomes

Genome ◽  
1991 ◽  
Vol 34 (6) ◽  
pp. 993-997 ◽  
Author(s):  
C. A. de la Seña ◽  
N. S. Fechheimer ◽  
K. E. Nestor
Keyword(s):  
Japanese Quail ◽  
Centromeric Region ◽  
Terminal Region ◽  
Z Chromosome ◽  
W Chromosome ◽  
Chromosome 4 ◽  
Banding Patterns ◽  
Chromosome Markers ◽  
C Banding

Observations were made of the C-banding patterns in several cells from 182 Japanese quail embryos to detect presence of stable variants. Each of the eight largest autosomes contains a C-band at the centromeric region. The short arm of autosome 8 is C-band positive, as is the entire W chromosome. The Z chromosome consistently contains an interstitial C-band in the long arm and a less prominent one in the short arm. Distinct variants of chromosome 4 and the Z chromosome were observed. In the Z chromosome a C-band at the terminal region of the short arm was markedly elongated in some embryos. Likewise, the short arm of chromosome 4 was much more prominent in one or both of the homologues in some embryos. Most of the microchromosomes contain a prominent C-band. The heteromorphisms are useful chromosome markers to detect the origins of heteroploidy in early embryos.Key words: C-band variants, Japanese quail, Coturnix.

scholarly journals Comparative cytogenetics in Cyclopogon (Orchidaceae)

Biologia ◽  
2013 ◽  
Vol 68 (1) ◽  
Author(s):  
Mauro Grabiele ◽  
Juan Cerutti ◽  
Diego Hojsgaard ◽  
Rubén Almada ◽  
Julio Daviña ◽  
...  
Keyword(s):  
Genome Size ◽  
Karyotype Analysis ◽  
Chromosome Length ◽  
The Novel ◽  
Comparative Cytogenetics ◽  
Molecular Approaches ◽  
Chromosome Fusions ◽  
Karyotype Morphology

AbstractA cytotaxonomical description of Cyclopogon (Spiranthinae, Orchidaceae) is carried out through a deep karyotype analysis of four species from NE Argentina. Distinctive karyotype parameters concerning the chromosomes number, morphology, size and symmetry and the genome size associate to each taxon. Cyclopogon calophyllus (2n = 2x =28; 18m + 10sm), C. congestus (2n = 2x = 32; 26m + 6sm), C. elatus (2n = 2x = 28; 18m + 10sm) and C. oliganthus (2n = 4x = 64; 40m + 24sm) possess symmetrical karyotypes (i-mean = 40.01–42.84; A 1 = 0.24–032; r>2 = 0.06–0.29) and excluding C. congestus (A 2 = 0.26; R = 2.62) unimodality is the rule (A 2 = 0.12–0.20; R = 1.73–1.92). Diploid taxa show a terminal macrosatellite in the m pair no. 2 (large arm) and share a comparable mean chromosome length (ca. 2.75 μm) and genome size (ca. 40 μm), superior to the tetraploid C. oliganthus (ca. 2 and 32 μm, respectively). The novel data added to preceding cytological, morphological and molecular approaches involving Cyclopogon and those related taxa of Spiranthinae largely based on x = 23 support the hypothesis that the unusual 2n and the karyotype morphology of Cyclopogon is an evolutionary advance within Spiranthinae with a basic reduction to x = 14 or 16 by chromosome fusions. A polyploid-dysploid series added to dibasic hybridization explain the extant 2n diversity though a paleopolyploid series on x = 7–8 is also possible.

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